RNA–Protein interactions for RNA: ENST00000484809.1

SNX5-212, Transcript of sorting nexin 5, humanhuman

TSL 2

Gene SNX5, Length 1,321 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-212ENST00000484809 TRIM52Q96A61 297 aa20.71■□□□□ 0.91
SNX5-212ENST00000484809 CHGAP10645 457 aaKnown RBP20.7■□□□□ 0.9
SNX5-212ENST00000484809 RIMS2Q9UQ26 1411 aa20.7■□□□□ 0.9
SNX5-212ENST00000484809 TRPM2O94759 1503 aa20.68■□□□□ 0.9
SNX5-212ENST00000484809 HDGFP51858 240 aaKnown RBP20.67■□□□□ 0.9
SNX5-212ENST00000484809 KIF1BO60333 1816 aa20.67■□□□□ 0.9
SNX5-212ENST00000484809 CLTCL1P53675 1640 aa20.66■□□□□ 0.9
SNX5-212ENST00000484809 SLC4A1APQ9BWU0 796 aaKnown RBP20.65■□□□□ 0.9
SNX5-212ENST00000484809 PLEKHG1Q9ULL1 1385 aa20.65■□□□□ 0.9
SNX5-212ENST00000484809 XIRP1Q702N8 1843 aaKnown RBP20.65■□□□□ 0.9
SNX5-212ENST00000484809 LRRC7Q96NW7 1537 aa20.64■□□□□ 0.9
SNX5-212ENST00000484809 UBAP1LF5GYI3 381 aa20.64■□□□□ 0.89
SNX5-212ENST00000484809 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.64■□□□□ 0.89
SNX5-212ENST00000484809 SLC26A8Q96RN1 970 aa20.63■□□□□ 0.89
SNX5-212ENST00000484809 PPP1R15AO75807 674 aaPredicted RBP20.62■□□□□ 0.89
SNX5-212ENST00000484809 CHD2O14647 1828 aaKnown RBP20.62■□□□□ 0.89
SNX5-212ENST00000484809 SETD5Q9C0A6 1442 aa20.6■□□□□ 0.89
SNX5-212ENST00000484809 BCANQ96GW7 911 aa20.6■□□□□ 0.89
SNX5-212ENST00000484809 NWD1Q149M9 1564 aa20.59■□□□□ 0.89
SNX5-212ENST00000484809 KCNA6P17658 529 aa20.58■□□□□ 0.89
SNX5-212ENST00000484809 NUTM2DQ5VT03 806 aaPredicted RBP20.58■□□□□ 0.89
SNX5-212ENST00000484809 ACIN1Q9UKV3 1341 aaKnown RBP20.57■□□□□ 0.88
SNX5-212ENST00000484809 ALKQ9UM73 1620 aa20.57■□□□□ 0.88
SNX5-212ENST00000484809 TOM1O60784 492 aa20.56■□□□□ 0.88
SNX5-212ENST00000484809 ADAMTS13Q76LX8 1427 aa20.56■□□□□ 0.88
SNX5-212ENST00000484809 DIP2AQ14689 1571 aa20.56■□□□□ 0.88
SNX5-212ENST00000484809 SCAF1Q9H7N4 1312 aaKnown RBP20.56■□□□□ 0.88
SNX5-212ENST00000484809 PPP4R3CPQ6ZMV5 832 aa20.55■□□□□ 0.88
SNX5-212ENST00000484809 MPHOSPH9Q99550 1183 aa20.55■□□□□ 0.88
SNX5-212ENST00000484809 TBX22Q9Y458 520 aa20.55■□□□□ 0.88
SNX5-212ENST00000484809 NEXMIFQ5QGS0 1516 aa20.55■□□□□ 0.88
SNX5-212ENST00000484809 ZNF326Q5BKZ1 582 aaKnown RBP20.54■□□□□ 0.88
SNX5-212ENST00000484809 NKTRP30414 1462 aaKnown RBP20.54■□□□□ 0.88
SNX5-212ENST00000484809 NRXN3Q9Y4C0 1643 aa20.54■□□□□ 0.88
SNX5-212ENST00000484809 RAB3GAP2Q9H2M9 1393 aa20.53■□□□□ 0.88
SNX5-212ENST00000484809 SETBP1Q9Y6X0 1596 aa20.51■□□□□ 0.87
SNX5-212ENST00000484809 PROSER2Q86WR7 435 aaPredicted RBP20.5■□□□□ 0.87
SNX5-212ENST00000484809 TMEM94Q12767 1356 aa20.5■□□□□ 0.87
SNX5-212ENST00000484809 PIK3R4Q99570 1358 aa20.5■□□□□ 0.87
SNX5-212ENST00000484809 PPLO60437 1756 aa20.49■□□□□ 0.87
SNX5-212ENST00000484809 PIP4K2BP78356 416 aa20.49■□□□□ 0.87
SNX5-212ENST00000484809 MAPK8IP2Q13387 824 aaPredicted RBP20.48■□□□□ 0.87
SNX5-212ENST00000484809 CCDC144AA2RUR9 1427 aa20.47■□□□□ 0.87
SNX5-212ENST00000484809 RPGRIP1LQ68CZ1 1315 aa20.45■□□□□ 0.86
SNX5-212ENST00000484809 RBM33Q96EV2 1170 aaKnown RBP20.44■□□□□ 0.86
SNX5-212ENST00000484809 PTPRUQ92729 1446 aa20.43■□□□□ 0.86
SNX5-212ENST00000484809 VGFO15240 615 aaPredicted RBP20.43■□□□□ 0.86
SNX5-212ENST00000484809 HRCP23327 699 aa20.43■□□□□ 0.86
SNX5-212ENST00000484809 XRN1Q8IZH2 1706 aaKnown RBP20.43■□□□□ 0.86
SNX5-212ENST00000484809 IFT172Q9UG01 1749 aa20.43■□□□□ 0.86
SNX5-212ENST00000484809 SETD1AO15047 1707 aaKnown RBP20.42■□□□□ 0.86
SNX5-212ENST00000484809 SPATA31E1Q6ZUB1 1445 aa20.41■□□□□ 0.86
SNX5-212ENST00000484809 AMOTL2Q9Y2J4 779 aa20.41■□□□□ 0.86
SNX5-212ENST00000484809 NCOA3Q9Y6Q9 1424 aa20.41■□□□□ 0.86
SNX5-212ENST00000484809 HSPA1LP34931 641 aa20.4■□□□□ 0.86
SNX5-212ENST00000484809 METP08581 1390 aa20.4■□□□□ 0.86
SNX5-212ENST00000484809 MSH6P52701 1360 aa20.38■□□□□ 0.85
SNX5-212ENST00000484809 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.36■□□□□ 0.85
SNX5-212ENST00000484809 RGL3Q3MIN7 710 aa20.36■□□□□ 0.85
SNX5-212ENST00000484809 POTEDQ86YR6 584 aa20.36■□□□□ 0.85
SNX5-212ENST00000484809 FAM135BQ49AJ0 1406 aa20.34■□□□□ 0.85
SNX5-212ENST00000484809 ANKRD30BQ9BXX2 1392 aa20.34■□□□□ 0.85
SNX5-212ENST00000484809 ROBO1Q9Y6N7 1651 aa20.33■□□□□ 0.85
SNX5-212ENST00000484809 ADGRF5Q8IZF2 1346 aa20.32■□□□□ 0.84
SNX5-212ENST00000484809 C19orf44Q9H6X5 657 aa20.31■□□□□ 0.84
SNX5-212ENST00000484809 C14orf37Q86TY3 774 aa20.3■□□□□ 0.84
SNX5-212ENST00000484809 SLAIN2Q9P270 581 aa20.29■□□□□ 0.84
SNX5-212ENST00000484809 PRAG1Q86YV5 1406 aa20.28■□□□□ 0.84
SNX5-212ENST00000484809 CADPS2Q86UW7 1296 aa20.27■□□□□ 0.83
SNX5-212ENST00000484809 NALCNQ8IZF0 1738 aa20.26■□□□□ 0.83
SNX5-212ENST00000484809 PIK3C2GO75747 1445 aa20.26■□□□□ 0.83
SNX5-212ENST00000484809 DCCP43146 1447 aa20.26■□□□□ 0.83
SNX5-212ENST00000484809 PTCH1Q13635 1447 aa20.26■□□□□ 0.83
SNX5-212ENST00000484809 DISP3Q9P2K9 1392 aa20.25■□□□□ 0.83
SNX5-212ENST00000484809 ATF3P18847 181 aa20.25■□□□□ 0.83
SNX5-212ENST00000484809 MYOM2P54296 1465 aa20.24■□□□□ 0.83
SNX5-212ENST00000484809 NRXN1Q9ULB1 1477 aa20.24■□□□□ 0.83
SNX5-212ENST00000484809 ADGRL3Q9HAR2 1447 aa20.23■□□□□ 0.83
SNX5-212ENST00000484809 ROBO2Q9HCK4 1378 aa20.23■□□□□ 0.83
SNX5-212ENST00000484809 PHLPP1O60346 1717 aa20.22■□□□□ 0.83
SNX5-212ENST00000484809 ASXL1Q8IXJ9 1541 aa20.22■□□□□ 0.83
SNX5-212ENST00000484809 LAMC1P11047 1609 aa20.21■□□□□ 0.83
SNX5-212ENST00000484809 MED1Q15648 1581 aaPredicted RBP20.21■□□□□ 0.83
SNX5-212ENST00000484809 KNDC1Q76NI1 1749 aa20.21■□□□□ 0.83
SNX5-212ENST00000484809 MST1RQ04912 1400 aa20.18■□□□□ 0.82
SNX5-212ENST00000484809 C14orf93Q9H972 538 aaKnown RBP20.18■□□□□ 0.82
SNX5-212ENST00000484809 LRPPRCP42704 1394 aaKnown RBP20.17■□□□□ 0.82
SNX5-212ENST00000484809 TECPR2O15040 1411 aa20.17■□□□□ 0.82
SNX5-212ENST00000484809 TMEM132EQ6IEE7 984 aa20.17■□□□□ 0.82
SNX5-212ENST00000484809 COL16A1Q07092 1604 aaPredicted RBP20.16■□□□□ 0.82
SNX5-212ENST00000484809 AHDC1Q5TGY3 1603 aaPredicted RBP20.16■□□□□ 0.82
SNX5-212ENST00000484809 ABCC11Q96J66 1382 aa20.16■□□□□ 0.82
SNX5-212ENST00000484809 YTHDC2Q9H6S0 1430 aaKnown RBP20.15■□□□□ 0.82
SNX5-212ENST00000484809 CFAP70Q5T0N1 1121 aa20.14■□□□□ 0.81
SNX5-212ENST00000484809 BRINP3Q76B58 766 aa20.14■□□□□ 0.81
SNX5-212ENST00000484809 STK26Q9P289 416 aa20.14■□□□□ 0.81
SNX5-212ENST00000484809 DCAF11Q8TEB1 546 aa20.13■□□□□ 0.81
SNX5-212ENST00000484809 STAC3Q96MF2 364 aa20.13■□□□□ 0.81
SNX5-212ENST00000484809 DHX57Q6P158 1386 aaKnown RBP20.13■□□□□ 0.81
SNX5-212ENST00000484809 NHSL1Q5SYE7 1610 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms