RNA–Protein interactions for RNA: ENST00000484600.6

ARPC1B-219, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 2

Gene ARPC1B, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-219ENST00000484600 CLTCL1P53675 1640 aa29.87■■■□□ 2.37
ARPC1B-219ENST00000484600 CERKQ8TCT0 537 aa29.86■■■□□ 2.37
ARPC1B-219ENST00000484600 ZNF326Q5BKZ1 582 aaKnown RBP29.85■■■□□ 2.37
ARPC1B-219ENST00000484600 BCANQ96GW7 911 aa29.85■■■□□ 2.37
ARPC1B-219ENST00000484600 ZNF335Q9H4Z2 1342 aaPredicted RBP29.84■■■□□ 2.37
ARPC1B-219ENST00000484600 ZFYVE9O95405 1425 aa29.83■■■□□ 2.37
ARPC1B-219ENST00000484600 FOXD1Q16676 465 aa29.83■■■□□ 2.37
ARPC1B-219ENST00000484600 CCDC144AA2RUR9 1427 aa29.82■■■□□ 2.36
ARPC1B-219ENST00000484600 LTBP4Q8N2S1 1624 aa29.8■■■□□ 2.36
ARPC1B-219ENST00000484600 PLEKHG1Q9ULL1 1385 aa29.78■■■□□ 2.36
ARPC1B-219ENST00000484600 CPS1P31327 1500 aa29.76■■■□□ 2.36
ARPC1B-219ENST00000484600 IQSEC2Q5JU85 1478 aa29.74■■■□□ 2.35
ARPC1B-219ENST00000484600 RPGRIP1LQ68CZ1 1315 aa29.72■■■□□ 2.35
ARPC1B-219ENST00000484600 NUTM2DQ5VT03 806 aaPredicted RBP29.71■■■□□ 2.35
ARPC1B-219ENST00000484600 SLC26A8Q96RN1 970 aa29.71■■■□□ 2.35
ARPC1B-219ENST00000484600 FBXO41Q8TF61 875 aa29.7■■■□□ 2.35
ARPC1B-219ENST00000484600 VGFO15240 615 aaPredicted RBP29.68■■■□□ 2.34
ARPC1B-219ENST00000484600 NEXMIFQ5QGS0 1516 aa29.66■■■□□ 2.34
ARPC1B-219ENST00000484600 DIP2AQ14689 1571 aa29.66■■■□□ 2.34
ARPC1B-219ENST00000484600 TBX22Q9Y458 520 aa29.66■■■□□ 2.34
ARPC1B-219ENST00000484600 KCNA6P17658 529 aa29.63■■■□□ 2.33
ARPC1B-219ENST00000484600 SENP3Q9H4L4 574 aaPredicted RBP29.63■■■□□ 2.33
ARPC1B-219ENST00000484600 ANKRD30BQ9BXX2 1392 aa29.61■■■□□ 2.33
ARPC1B-219ENST00000484600 RGL3Q3MIN7 710 aa29.6■■■□□ 2.33
ARPC1B-219ENST00000484600 STRCP1A6NGW2 1772 aa29.59■■■□□ 2.33
ARPC1B-219ENST00000484600 PPLO60437 1756 aa29.59■■■□□ 2.33
ARPC1B-219ENST00000484600 PIK3R4Q99570 1358 aa29.59■■■□□ 2.33
ARPC1B-219ENST00000484600 SPATA31E1Q6ZUB1 1445 aa29.59■■■□□ 2.33
ARPC1B-219ENST00000484600 SETBP1Q9Y6X0 1596 aa29.59■■■□□ 2.33
ARPC1B-219ENST00000484600 IFT172Q9UG01 1749 aa29.57■■■□□ 2.32
ARPC1B-219ENST00000484600 ADAMTS13Q76LX8 1427 aa29.57■■■□□ 2.32
ARPC1B-219ENST00000484600 ILDR1Q86SU0 546 aaPredicted RBP29.57■■■□□ 2.32
ARPC1B-219ENST00000484600 CHD2O14647 1828 aaKnown RBP29.55■■■□□ 2.32
ARPC1B-219ENST00000484600 LRRC7Q96NW7 1537 aa29.54■■■□□ 2.32
ARPC1B-219ENST00000484600 NKTRP30414 1462 aaKnown RBP29.54■■■□□ 2.32
ARPC1B-219ENST00000484600 NWD1Q149M9 1564 aa29.53■■■□□ 2.32
ARPC1B-219ENST00000484600 PROSER2Q86WR7 435 aaPredicted RBP29.51■■■□□ 2.31
ARPC1B-219ENST00000484600 NRXN3Q9Y4C0 1643 aa29.51■■■□□ 2.31
ARPC1B-219ENST00000484600 UBAP1LF5GYI3 381 aa29.49■■■□□ 2.31
ARPC1B-219ENST00000484600 TOM1O60784 492 aa29.49■■■□□ 2.31
ARPC1B-219ENST00000484600 AMOTL2Q9Y2J4 779 aa29.44■■■□□ 2.3
ARPC1B-219ENST00000484600 TMEM94Q12767 1356 aa29.43■■■□□ 2.3
ARPC1B-219ENST00000484600 STAC3Q96MF2 364 aa29.43■■■□□ 2.3
ARPC1B-219ENST00000484600 DHX57Q6P158 1386 aaKnown RBP29.42■■■□□ 2.3
ARPC1B-219ENST00000484600 ADGRF5Q8IZF2 1346 aa29.42■■■□□ 2.3
ARPC1B-219ENST00000484600 ALKQ9UM73 1620 aa29.42■■■□□ 2.3
ARPC1B-219ENST00000484600 MYOM2P54296 1465 aa29.4■■■□□ 2.3
ARPC1B-219ENST00000484600 METP08581 1390 aa29.39■■■□□ 2.3
ARPC1B-219ENST00000484600 XIRP1Q702N8 1843 aaKnown RBP29.39■■■□□ 2.3
ARPC1B-219ENST00000484600 NCOA3Q9Y6Q9 1424 aa29.38■■■□□ 2.29
ARPC1B-219ENST00000484600 SETD1AO15047 1707 aaKnown RBP29.38■■■□□ 2.29
ARPC1B-219ENST00000484600 PCGF6Q9BYE7 350 aa29.38■■■□□ 2.29
ARPC1B-219ENST00000484600 PTPRUQ92729 1446 aa29.37■■■□□ 2.29
ARPC1B-219ENST00000484600 C14orf37Q86TY3 774 aa29.36■■■□□ 2.29
ARPC1B-219ENST00000484600 MSH6P52701 1360 aa29.36■■■□□ 2.29
ARPC1B-219ENST00000484600 PIK3C2GO75747 1445 aa29.36■■■□□ 2.29
ARPC1B-219ENST00000484600 XRN1Q8IZH2 1706 aaKnown RBP29.35■■■□□ 2.29
ARPC1B-219ENST00000484600 DCAF11Q8TEB1 546 aa29.35■■■□□ 2.29
ARPC1B-219ENST00000484600 SCAF1Q9H7N4 1312 aaKnown RBP29.34■■■□□ 2.29
ARPC1B-219ENST00000484600 LAMC1P11047 1609 aa29.32■■■□□ 2.28
ARPC1B-219ENST00000484600 NRXN1Q9ULB1 1477 aa29.31■■■□□ 2.28
ARPC1B-219ENST00000484600 RBM33Q96EV2 1170 aaKnown RBP29.31■■■□□ 2.28
ARPC1B-219ENST00000484600 KDM2AQ9Y2K7 1162 aa29.31■■■□□ 2.28
ARPC1B-219ENST00000484600 PIP4K2BP78356 416 aa29.3■■■□□ 2.28
ARPC1B-219ENST00000484600 C14orf93Q9H972 538 aaKnown RBP29.27■■■□□ 2.28
ARPC1B-219ENST00000484600 C19orf44Q9H6X5 657 aa29.26■■■□□ 2.27
ARPC1B-219ENST00000484600 PTCH1Q13635 1447 aa29.26■■■□□ 2.27
ARPC1B-219ENST00000484600 PRAG1Q86YV5 1406 aa29.23■■■□□ 2.27
ARPC1B-219ENST00000484600 ATF3P18847 181 aa29.23■■■□□ 2.27
ARPC1B-219ENST00000484600 CADPS2Q86UW7 1296 aa29.22■■■□□ 2.27
ARPC1B-219ENST00000484600 NEUROD1Q13562 356 aa29.21■■■□□ 2.27
ARPC1B-219ENST00000484600 CFAP70Q5T0N1 1121 aa29.21■■■□□ 2.27
ARPC1B-219ENST00000484600 LRPPRCP42704 1394 aaKnown RBP29.21■■■□□ 2.27
ARPC1B-219ENST00000484600 TMEM132EQ6IEE7 984 aa29.19■■■□□ 2.26
ARPC1B-219ENST00000484600 SIN3AQ96ST3 1273 aa29.19■■■□□ 2.26
ARPC1B-219ENST00000484600 STK26Q9P289 416 aa29.19■■■□□ 2.26
ARPC1B-219ENST00000484600 ABCC11Q96J66 1382 aa29.18■■■□□ 2.26
ARPC1B-219ENST00000484600 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.18■■■□□ 2.26
ARPC1B-219ENST00000484600 DCCP43146 1447 aa29.18■■■□□ 2.26
ARPC1B-219ENST00000484600 YTHDC2Q9H6S0 1430 aaKnown RBP29.18■■■□□ 2.26
ARPC1B-219ENST00000484600 KNDC1Q76NI1 1749 aa29.17■■■□□ 2.26
ARPC1B-219ENST00000484600 ROBO2Q9HCK4 1378 aa29.16■■■□□ 2.26
ARPC1B-219ENST00000484600 TECPR2O15040 1411 aa29.16■■■□□ 2.26
ARPC1B-219ENST00000484600 ADGRL3Q9HAR2 1447 aa29.16■■■□□ 2.26
ARPC1B-219ENST00000484600 SLAIN2Q9P270 581 aa29.15■■■□□ 2.26
ARPC1B-219ENST00000484600 ASXL1Q8IXJ9 1541 aa29.15■■■□□ 2.26
ARPC1B-219ENST00000484600 KIAA1210Q9ULL0 1709 aa29.14■■■□□ 2.25
ARPC1B-219ENST00000484600 FAM135BQ49AJ0 1406 aa29.13■■■□□ 2.25
ARPC1B-219ENST00000484600 SIRT1Q96EB6 747 aa29.12■■■□□ 2.25
ARPC1B-219ENST00000484600 L3MBTL2Q969R5 705 aa29.11■■■□□ 2.25
ARPC1B-219ENST00000484600 NALCNQ8IZF0 1738 aa29.09■■■□□ 2.25
ARPC1B-219ENST00000484600 TONSLQ96HA7 1378 aa29.07■■■□□ 2.24
ARPC1B-219ENST00000484600 ROBO1Q9Y6N7 1651 aa29.06■■■□□ 2.24
ARPC1B-219ENST00000484600 CLSPNQ9HAW4 1339 aa29.06■■■□□ 2.24
ARPC1B-219ENST00000484600 HSPA1LP34931 641 aa29.06■■■□□ 2.24
ARPC1B-219ENST00000484600 ADGRB1O14514 1584 aa29.05■■■□□ 2.24
ARPC1B-219ENST00000484600 DLC1Q96QB1 1528 aa29.04■■■□□ 2.24
ARPC1B-219ENST00000484600 WAPLQ7Z5K2 1190 aa29.04■■■□□ 2.24
ARPC1B-219ENST00000484600 POGKQ9P215 609 aa29.04■■■□□ 2.24
ARPC1B-219ENST00000484600 TRAK1Q9UPV9 953 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms