RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 CPS1P31327 1500 aa17.37■□□□□ 0.37
CDK5RAP2-217ENST00000484546 STRCP1A6NGW2 1772 aa17.35■□□□□ 0.37
CDK5RAP2-217ENST00000484546 FBXO41Q8TF61 875 aa17.35■□□□□ 0.37
CDK5RAP2-217ENST00000484546 KIF1BO60333 1816 aa17.35■□□□□ 0.37
CDK5RAP2-217ENST00000484546 MPHOSPH9Q99550 1183 aa17.34■□□□□ 0.37
CDK5RAP2-217ENST00000484546 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
CDK5RAP2-217ENST00000484546 PLEKHG1Q9ULL1 1385 aa17.33■□□□□ 0.36
CDK5RAP2-217ENST00000484546 HDGFP51858 240 aaKnown RBP17.33■□□□□ 0.36
CDK5RAP2-217ENST00000484546 PPP1R15AO75807 674 aaPredicted RBP17.32■□□□□ 0.36
CDK5RAP2-217ENST00000484546 FOXD1Q16676 465 aa17.31■□□□□ 0.36
CDK5RAP2-217ENST00000484546 BCANQ96GW7 911 aa17.31■□□□□ 0.36
CDK5RAP2-217ENST00000484546 NEXMIFQ5QGS0 1516 aa17.31■□□□□ 0.36
CDK5RAP2-217ENST00000484546 ZNF326Q5BKZ1 582 aaKnown RBP17.3■□□□□ 0.36
CDK5RAP2-217ENST00000484546 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.29■□□□□ 0.36
CDK5RAP2-217ENST00000484546 DIP2AQ14689 1571 aa17.28■□□□□ 0.36
CDK5RAP2-217ENST00000484546 NWD1Q149M9 1564 aa17.28■□□□□ 0.36
CDK5RAP2-217ENST00000484546 HRCP23327 699 aa17.28■□□□□ 0.36
CDK5RAP2-217ENST00000484546 TRIM26Q12899 539 aaPredicted RBP17.28■□□□□ 0.36
CDK5RAP2-217ENST00000484546 NUTM2DQ5VT03 806 aaPredicted RBP17.27■□□□□ 0.36
CDK5RAP2-217ENST00000484546 SLC26A8Q96RN1 970 aa17.27■□□□□ 0.36
CDK5RAP2-217ENST00000484546 NRXN3Q9Y4C0 1643 aa17.27■□□□□ 0.36
CDK5RAP2-217ENST00000484546 CCDC144AA2RUR9 1427 aa17.27■□□□□ 0.35
CDK5RAP2-217ENST00000484546 LRRC7Q96NW7 1537 aa17.26■□□□□ 0.35
CDK5RAP2-217ENST00000484546 ADAMTS13Q76LX8 1427 aa17.26■□□□□ 0.35
CDK5RAP2-217ENST00000484546 SETBP1Q9Y6X0 1596 aa17.25■□□□□ 0.35
CDK5RAP2-217ENST00000484546 PPLO60437 1756 aa17.23■□□□□ 0.35
CDK5RAP2-217ENST00000484546 NKTRP30414 1462 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP2-217ENST00000484546 SPATA31E1Q6ZUB1 1445 aa17.22■□□□□ 0.35
CDK5RAP2-217ENST00000484546 CHD2O14647 1828 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP2-217ENST00000484546 XIRP1Q702N8 1843 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP2-217ENST00000484546 PHF23Q9BUL5 403 aaPredicted RBP17.21■□□□□ 0.35
CDK5RAP2-217ENST00000484546 KCNA6P17658 529 aa17.2■□□□□ 0.34
CDK5RAP2-217ENST00000484546 TBX22Q9Y458 520 aa17.2■□□□□ 0.34
CDK5RAP2-217ENST00000484546 IFT172Q9UG01 1749 aa17.2■□□□□ 0.34
CDK5RAP2-217ENST00000484546 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
CDK5RAP2-217ENST00000484546 PIK3R4Q99570 1358 aa17.18■□□□□ 0.34
CDK5RAP2-217ENST00000484546 UBAP1LF5GYI3 381 aa17.18■□□□□ 0.34
CDK5RAP2-217ENST00000484546 RPGRIP1LQ68CZ1 1315 aa17.18■□□□□ 0.34
CDK5RAP2-217ENST00000484546 SETD1AO15047 1707 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP2-217ENST00000484546 ANKRD30BQ9BXX2 1392 aa17.16■□□□□ 0.34
CDK5RAP2-217ENST00000484546 XRN1Q8IZH2 1706 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP2-217ENST00000484546 TMEM94Q12767 1356 aa17.15■□□□□ 0.34
CDK5RAP2-217ENST00000484546 RGL3Q3MIN7 710 aa17.15■□□□□ 0.34
CDK5RAP2-217ENST00000484546 PTPRUQ92729 1446 aa17.14■□□□□ 0.33
CDK5RAP2-217ENST00000484546 VGFO15240 615 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP2-217ENST00000484546 METP08581 1390 aa17.13■□□□□ 0.33
CDK5RAP2-217ENST00000484546 PROSER2Q86WR7 435 aaPredicted RBP17.12■□□□□ 0.33
CDK5RAP2-217ENST00000484546 TOM1O60784 492 aa17.1■□□□□ 0.33
CDK5RAP2-217ENST00000484546 RBM33Q96EV2 1170 aaKnown RBP17.1■□□□□ 0.33
CDK5RAP2-217ENST00000484546 MYOM2P54296 1465 aa17.1■□□□□ 0.33
CDK5RAP2-217ENST00000484546 ADGRF5Q8IZF2 1346 aa17.09■□□□□ 0.33
CDK5RAP2-217ENST00000484546 PIK3C2GO75747 1445 aa17.08■□□□□ 0.32
CDK5RAP2-217ENST00000484546 AMOTL2Q9Y2J4 779 aa17.08■□□□□ 0.32
CDK5RAP2-217ENST00000484546 NRXN1Q9ULB1 1477 aa17.07■□□□□ 0.32
CDK5RAP2-217ENST00000484546 NCOA3Q9Y6Q9 1424 aa17.07■□□□□ 0.32
CDK5RAP2-217ENST00000484546 SCAF1Q9H7N4 1312 aaKnown RBP17.06■□□□□ 0.32
CDK5RAP2-217ENST00000484546 PIP4K2BP78356 416 aa17.06■□□□□ 0.32
CDK5RAP2-217ENST00000484546 ASXL1Q8IXJ9 1541 aa17.06■□□□□ 0.32
CDK5RAP2-217ENST00000484546 PRAG1Q86YV5 1406 aa17.05■□□□□ 0.32
CDK5RAP2-217ENST00000484546 MSH6P52701 1360 aa17.05■□□□□ 0.32
CDK5RAP2-217ENST00000484546 PTCH1Q13635 1447 aa17.04■□□□□ 0.32
CDK5RAP2-217ENST00000484546 LAMC1P11047 1609 aa17.04■□□□□ 0.32
CDK5RAP2-217ENST00000484546 PCGF6Q9BYE7 350 aa17.03■□□□□ 0.32
CDK5RAP2-217ENST00000484546 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.03■□□□□ 0.32
CDK5RAP2-217ENST00000484546 C14orf37Q86TY3 774 aa17.02■□□□□ 0.32
CDK5RAP2-217ENST00000484546 NALCNQ8IZF0 1738 aa17.01■□□□□ 0.31
CDK5RAP2-217ENST00000484546 KNDC1Q76NI1 1749 aa17.01■□□□□ 0.31
CDK5RAP2-217ENST00000484546 ROBO1Q9Y6N7 1651 aa17■□□□□ 0.31
CDK5RAP2-217ENST00000484546 DHX57Q6P158 1386 aaKnown RBP17■□□□□ 0.31
CDK5RAP2-217ENST00000484546 ROBO2Q9HCK4 1378 aa17■□□□□ 0.31
CDK5RAP2-217ENST00000484546 ADGRL3Q9HAR2 1447 aa16.99■□□□□ 0.31
CDK5RAP2-217ENST00000484546 DCAF11Q8TEB1 546 aa16.99■□□□□ 0.31
CDK5RAP2-217ENST00000484546 KDM2AQ9Y2K7 1162 aa16.99■□□□□ 0.31
CDK5RAP2-217ENST00000484546 TECPR2O15040 1411 aa16.98■□□□□ 0.31
CDK5RAP2-217ENST00000484546 DCCP43146 1447 aa16.98■□□□□ 0.31
CDK5RAP2-217ENST00000484546 HSPA1LP34931 641 aa16.98■□□□□ 0.31
CDK5RAP2-217ENST00000484546 FAM135BQ49AJ0 1406 aa16.97■□□□□ 0.31
CDK5RAP2-217ENST00000484546 STAC3Q96MF2 364 aa16.97■□□□□ 0.31
CDK5RAP2-217ENST00000484546 LRPPRCP42704 1394 aaKnown RBP16.97■□□□□ 0.31
CDK5RAP2-217ENST00000484546 NEUROD1Q13562 356 aa16.96■□□□□ 0.31
CDK5RAP2-217ENST00000484546 C19orf44Q9H6X5 657 aa16.96■□□□□ 0.31
CDK5RAP2-217ENST00000484546 C14orf93Q9H972 538 aaKnown RBP16.96■□□□□ 0.31
CDK5RAP2-217ENST00000484546 YTHDC2Q9H6S0 1430 aaKnown RBP16.96■□□□□ 0.3
CDK5RAP2-217ENST00000484546 ADGRB1O14514 1584 aa16.94■□□□□ 0.3
CDK5RAP2-217ENST00000484546 CFAP70Q5T0N1 1121 aa16.94■□□□□ 0.3
CDK5RAP2-217ENST00000484546 TMEM132EQ6IEE7 984 aa16.94■□□□□ 0.3
CDK5RAP2-217ENST00000484546 CADPS2Q86UW7 1296 aa16.94■□□□□ 0.3
CDK5RAP2-217ENST00000484546 ABCC11Q96J66 1382 aa16.93■□□□□ 0.3
CDK5RAP2-217ENST00000484546 ATF3P18847 181 aa16.93■□□□□ 0.3
CDK5RAP2-217ENST00000484546 SLAIN2Q9P270 581 aa16.93■□□□□ 0.3
CDK5RAP2-217ENST00000484546 SIN3AQ96ST3 1273 aa16.92■□□□□ 0.3
CDK5RAP2-217ENST00000484546 STK26Q9P289 416 aa16.92■□□□□ 0.3
CDK5RAP2-217ENST00000484546 MST1RQ04912 1400 aa16.92■□□□□ 0.3
CDK5RAP2-217ENST00000484546 CDC42BPGQ6DT37 1551 aa16.91■□□□□ 0.3
CDK5RAP2-217ENST00000484546 PLEKHH1Q9ULM0 1364 aa16.89■□□□□ 0.3
CDK5RAP2-217ENST00000484546 DLC1Q96QB1 1528 aa16.89■□□□□ 0.29
CDK5RAP2-217ENST00000484546 PHLPP1O60346 1717 aa16.88■□□□□ 0.29
CDK5RAP2-217ENST00000484546 KIAA1210Q9ULL0 1709 aa16.88■□□□□ 0.29
CDK5RAP2-217ENST00000484546 AHDC1Q5TGY3 1603 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP2-217ENST00000484546 TONSLQ96HA7 1378 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms