RNA–Protein interactions for RNA: ENST00000484194.1

HLA-E-202, Transcript of major histocompatibility complex, class I, E, humanhuman

Gene HLA-E, Length 726 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-E-202ENST00000484194 RIMS2Q9UQ26 1411 aa38.56■■■■□ 3.76
HLA-E-202ENST00000484194 CHGAP10645 457 aaKnown RBP38.56■■■■□ 3.76
HLA-E-202ENST00000484194 SLC26A8Q96RN1 970 aa38.56■■■■□ 3.76
HLA-E-202ENST00000484194 KCNA6P17658 529 aa38.55■■■■□ 3.76
HLA-E-202ENST00000484194 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.54■■■■□ 3.76
HLA-E-202ENST00000484194 PLEKHG1Q9ULL1 1385 aa38.53■■■■□ 3.76
HLA-E-202ENST00000484194 ALKQ9UM73 1620 aa38.52■■■■□ 3.76
HLA-E-202ENST00000484194 HSPA1LP34931 641 aa38.52■■■■□ 3.76
HLA-E-202ENST00000484194 NAIPQ13075 1403 aa38.46■■■■□ 3.75
HLA-E-202ENST00000484194 XIRP1Q702N8 1843 aaKnown RBP38.45■■■■□ 3.75
HLA-E-202ENST00000484194 NKTRP30414 1462 aaKnown RBP38.45■■■■□ 3.75
HLA-E-202ENST00000484194 PROSER2Q86WR7 435 aaPredicted RBP38.43■■■■□ 3.74
HLA-E-202ENST00000484194 NWD1Q149M9 1564 aa38.43■■■■□ 3.74
HLA-E-202ENST00000484194 SPHKAPQ2M3C7 1700 aa38.43■■■■□ 3.74
HLA-E-202ENST00000484194 TMEM94Q12767 1356 aa38.43■■■■□ 3.74
HLA-E-202ENST00000484194 HFM1A2PYH4 1435 aa38.39■■■■□ 3.74
HLA-E-202ENST00000484194 TBX22Q9Y458 520 aa38.38■■■■□ 3.73
HLA-E-202ENST00000484194 SENP3Q9H4L4 574 aaPredicted RBP38.36■■■■□ 3.73
HLA-E-202ENST00000484194 DIP2AQ14689 1571 aa38.34■■■■□ 3.73
HLA-E-202ENST00000484194 CHD2O14647 1828 aaKnown RBP38.33■■■■□ 3.73
HLA-E-202ENST00000484194 NUTM2DQ5VT03 806 aaPredicted RBP38.31■■■■□ 3.72
HLA-E-202ENST00000484194 TRIM52Q96A61 297 aa38.3■■■■□ 3.72
HLA-E-202ENST00000484194 PIK3R4Q99570 1358 aa38.28■■■■□ 3.72
HLA-E-202ENST00000484194 ADAMTS13Q76LX8 1427 aa38.28■■■■□ 3.72
HLA-E-202ENST00000484194 ILDR2Q71H61 639 aa38.27■■■■□ 3.72
HLA-E-202ENST00000484194 MSH6P52701 1360 aa38.27■■■■□ 3.72
HLA-E-202ENST00000484194 TRPM2O94759 1503 aa38.27■■■■□ 3.72
HLA-E-202ENST00000484194 FAM135BQ49AJ0 1406 aa38.25■■■■□ 3.71
HLA-E-202ENST00000484194 ZNF326Q5BKZ1 582 aaKnown RBP38.25■■■■□ 3.71
HLA-E-202ENST00000484194 RBM33Q96EV2 1170 aaKnown RBP38.24■■■■□ 3.71
HLA-E-202ENST00000484194 MED1Q15648 1581 aaPredicted RBP38.23■■■■□ 3.71
HLA-E-202ENST00000484194 NCOA3Q9Y6Q9 1424 aa38.21■■■■□ 3.71
HLA-E-202ENST00000484194 CLTCL1P53675 1640 aa38.2■■■■□ 3.71
HLA-E-202ENST00000484194 SLC4A1APQ9BWU0 796 aaKnown RBP38.18■■■■□ 3.7
HLA-E-202ENST00000484194 KIF1BO60333 1816 aa38.17■■■■□ 3.7
HLA-E-202ENST00000484194 SETBP1Q9Y6X0 1596 aa38.14■■■■□ 3.7
HLA-E-202ENST00000484194 C14orf37Q86TY3 774 aa38.12■■■■□ 3.69
HLA-E-202ENST00000484194 ROBO1Q9Y6N7 1651 aa38.11■■■■□ 3.69
HLA-E-202ENST00000484194 SLAIN2Q9P270 581 aa38.1■■■■□ 3.69
HLA-E-202ENST00000484194 SOCS7O14512 581 aa38.09■■■■□ 3.69
HLA-E-202ENST00000484194 AMOTL2Q9Y2J4 779 aa38.09■■■■□ 3.69
HLA-E-202ENST00000484194 NEXMIFQ5QGS0 1516 aa38.08■■■■□ 3.69
HLA-E-202ENST00000484194 NRXN3Q9Y4C0 1643 aa38.08■■■■□ 3.69
HLA-E-202ENST00000484194 PHF23Q9BUL5 403 aaPredicted RBP38.06■■■■□ 3.68
HLA-E-202ENST00000484194 C19orf44Q9H6X5 657 aa38.04■■■■□ 3.68
HLA-E-202ENST00000484194 ACIN1Q9UKV3 1341 aaKnown RBP38.03■■■■□ 3.68
HLA-E-202ENST00000484194 PTPRUQ92729 1446 aa38.03■■■■□ 3.68
HLA-E-202ENST00000484194 CADPS2Q86UW7 1296 aa38.02■■■■□ 3.68
HLA-E-202ENST00000484194 VGFO15240 615 aaPredicted RBP38.01■■■■□ 3.68
HLA-E-202ENST00000484194 RPGRIP1LQ68CZ1 1315 aa37.99■■■■□ 3.67
HLA-E-202ENST00000484194 ATF3P18847 181 aa37.99■■■■□ 3.67
HLA-E-202ENST00000484194 XRN1Q8IZH2 1706 aaKnown RBP37.98■■■■□ 3.67
HLA-E-202ENST00000484194 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.97■■■■□ 3.67
HLA-E-202ENST00000484194 METP08581 1390 aa37.95■■■■□ 3.67
HLA-E-202ENST00000484194 DCCP43146 1447 aa37.91■■■■□ 3.66
HLA-E-202ENST00000484194 PHLPP1O60346 1717 aa37.9■■■■□ 3.66
HLA-E-202ENST00000484194 CCDC144AA2RUR9 1427 aa37.9■■■■□ 3.66
HLA-E-202ENST00000484194 MPHOSPH9Q99550 1183 aa37.9■■■■□ 3.66
HLA-E-202ENST00000484194 FOXD1Q16676 465 aa37.88■■■■□ 3.65
HLA-E-202ENST00000484194 PPLO60437 1756 aa37.85■■■■□ 3.65
HLA-E-202ENST00000484194 SETD5Q9C0A6 1442 aa37.85■■■■□ 3.65
HLA-E-202ENST00000484194 JCADQ9P266 1359 aa37.8■■■■□ 3.64
HLA-E-202ENST00000484194 ADGRL3Q9HAR2 1447 aa37.78■■■■□ 3.64
HLA-E-202ENST00000484194 SETD1AO15047 1707 aaKnown RBP37.77■■■■□ 3.64
HLA-E-202ENST00000484194 COL16A1Q07092 1604 aaPredicted RBP37.76■■■■□ 3.64
HLA-E-202ENST00000484194 PTCH1Q13635 1447 aa37.76■■■■□ 3.63
HLA-E-202ENST00000484194 AHDC1Q5TGY3 1603 aaPredicted RBP37.76■■■■□ 3.63
HLA-E-202ENST00000484194 ANKRD30BQ9BXX2 1392 aa37.73■■■■□ 3.63
HLA-E-202ENST00000484194 SPATA31E1Q6ZUB1 1445 aa37.72■■■■□ 3.63
HLA-E-202ENST00000484194 BRINP3Q76B58 766 aa37.72■■■■□ 3.63
HLA-E-202ENST00000484194 RGL3Q3MIN7 710 aa37.71■■■■□ 3.63
HLA-E-202ENST00000484194 MST1RQ04912 1400 aa37.7■■■■□ 3.63
HLA-E-202ENST00000484194 PRAG1Q86YV5 1406 aa37.7■■■■□ 3.63
HLA-E-202ENST00000484194 NALCNQ8IZF0 1738 aa37.68■■■■□ 3.62
HLA-E-202ENST00000484194 RAB3GAP2Q9H2M9 1393 aa37.67■■■■□ 3.62
HLA-E-202ENST00000484194 ASXL1Q8IXJ9 1541 aa37.66■■■■□ 3.62
HLA-E-202ENST00000484194 SPATA31A6Q5VVP1 1343 aa37.65■■■■□ 3.62
HLA-E-202ENST00000484194 ROBO2Q9HCK4 1378 aa37.65■■■■□ 3.62
HLA-E-202ENST00000484194 IFT172Q9UG01 1749 aa37.64■■■■□ 3.62
HLA-E-202ENST00000484194 RGS17Q9UGC6 210 aaPredicted RBP37.64■■■■□ 3.62
HLA-E-202ENST00000484194 ADGRF5Q8IZF2 1346 aa37.63■■■■□ 3.62
HLA-E-202ENST00000484194 SHPRHQ149N8 1683 aa37.59■■■■□ 3.61
HLA-E-202ENST00000484194 NHSL1Q5SYE7 1610 aa37.56■■■■□ 3.6
HLA-E-202ENST00000484194 PIK3C2GO75747 1445 aa37.53■■■■□ 3.6
HLA-E-202ENST00000484194 C1orf167Q5SNV9 1468 aa37.53■■■■□ 3.6
HLA-E-202ENST00000484194 MEX3CQ5U5Q3 659 aaKnown RBP37.51■■■■□ 3.6
HLA-E-202ENST00000484194 LRRC59Q96AG4 307 aaKnown RBP37.51■■■■□ 3.6
HLA-E-202ENST00000484194 HRCP23327 699 aa37.49■■■■□ 3.59
HLA-E-202ENST00000484194 LRPPRCP42704 1394 aaKnown RBP37.49■■■■□ 3.59
HLA-E-202ENST00000484194 TECPR2O15040 1411 aa37.49■■■■□ 3.59
HLA-E-202ENST00000484194 POTEAQ6S8J7 498 aa37.47■■■■□ 3.59
HLA-E-202ENST00000484194 LRP6O75581 1613 aa37.47■■■■□ 3.59
HLA-E-202ENST00000484194 STK26Q9P289 416 aa37.46■■■■□ 3.59
HLA-E-202ENST00000484194 ABCC11Q96J66 1382 aa37.45■■■■□ 3.59
HLA-E-202ENST00000484194 MYOM2P54296 1465 aa37.45■■■■□ 3.59
HLA-E-202ENST00000484194 CDC42BPGQ6DT37 1551 aa37.44■■■■□ 3.58
HLA-E-202ENST00000484194 KNDC1Q76NI1 1749 aa37.43■■■■□ 3.58
HLA-E-202ENST00000484194 LAMC1P11047 1609 aa37.41■■■■□ 3.58
HLA-E-202ENST00000484194 TMEM132EQ6IEE7 984 aa37.41■■■■□ 3.58
HLA-E-202ENST00000484194 NRXN1Q9ULB1 1477 aa37.4■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms