RNA–Protein interactions for RNA: ENST00000484050.1

LYSMD4-207, Transcript of LysM domain containing 4, humanhuman

TSL 4

Gene LYSMD4, Length 551 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-207ENST00000484050 DISP3Q9P2K9 1392 aa37.78■■■■□ 3.64
LYSMD4-207ENST00000484050 NAIPQ13075 1403 aa37.78■■■■□ 3.64
LYSMD4-207ENST00000484050 CHGAP10645 457 aaKnown RBP37.76■■■■□ 3.64
LYSMD4-207ENST00000484050 SPHKAPQ2M3C7 1700 aa37.75■■■■□ 3.63
LYSMD4-207ENST00000484050 HSPA1LP34931 641 aa37.73■■■■□ 3.63
LYSMD4-207ENST00000484050 SENP3Q9H4L4 574 aaPredicted RBP37.73■■■■□ 3.63
LYSMD4-207ENST00000484050 PLEKHG1Q9ULL1 1385 aa37.72■■■■□ 3.63
LYSMD4-207ENST00000484050 BCANQ96GW7 911 aa37.72■■■■□ 3.63
LYSMD4-207ENST00000484050 PPP1R15AO75807 674 aaPredicted RBP37.7■■■■□ 3.63
LYSMD4-207ENST00000484050 KCNA6P17658 529 aa37.7■■■■□ 3.63
LYSMD4-207ENST00000484050 NWD1Q149M9 1564 aa37.69■■■■□ 3.62
LYSMD4-207ENST00000484050 HDGFP51858 240 aaKnown RBP37.69■■■■□ 3.62
LYSMD4-207ENST00000484050 HFM1A2PYH4 1435 aa37.65■■■■□ 3.62
LYSMD4-207ENST00000484050 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.64■■■■□ 3.62
LYSMD4-207ENST00000484050 NUTM2DQ5VT03 806 aaPredicted RBP37.63■■■■□ 3.61
LYSMD4-207ENST00000484050 TMEM94Q12767 1356 aa37.63■■■■□ 3.61
LYSMD4-207ENST00000484050 CHD2O14647 1828 aaKnown RBP37.63■■■■□ 3.61
LYSMD4-207ENST00000484050 NKTRP30414 1462 aaKnown RBP37.62■■■■□ 3.61
LYSMD4-207ENST00000484050 PROSER2Q86WR7 435 aaPredicted RBP37.59■■■■□ 3.61
LYSMD4-207ENST00000484050 RBM33Q96EV2 1170 aaKnown RBP37.56■■■■□ 3.6
LYSMD4-207ENST00000484050 ADAMTS13Q76LX8 1427 aa37.55■■■■□ 3.6
LYSMD4-207ENST00000484050 CLTCL1P53675 1640 aa37.55■■■■□ 3.6
LYSMD4-207ENST00000484050 TBX22Q9Y458 520 aa37.54■■■■□ 3.6
LYSMD4-207ENST00000484050 TRPM2O94759 1503 aa37.54■■■■□ 3.6
LYSMD4-207ENST00000484050 DIP2AQ14689 1571 aa37.54■■■■□ 3.6
LYSMD4-207ENST00000484050 ILDR2Q71H61 639 aa37.53■■■■□ 3.6
LYSMD4-207ENST00000484050 TRIM52Q96A61 297 aa37.52■■■■□ 3.6
LYSMD4-207ENST00000484050 KIF1BO60333 1816 aa37.47■■■■□ 3.59
LYSMD4-207ENST00000484050 MED1Q15648 1581 aaPredicted RBP37.46■■■■□ 3.59
LYSMD4-207ENST00000484050 NRXN3Q9Y4C0 1643 aa37.44■■■■□ 3.58
LYSMD4-207ENST00000484050 ZNF326Q5BKZ1 582 aaKnown RBP37.44■■■■□ 3.58
LYSMD4-207ENST00000484050 PIK3R4Q99570 1358 aa37.42■■■■□ 3.58
LYSMD4-207ENST00000484050 FAM135BQ49AJ0 1406 aa37.41■■■■□ 3.58
LYSMD4-207ENST00000484050 MSH6P52701 1360 aa37.41■■■■□ 3.58
LYSMD4-207ENST00000484050 SLC4A1APQ9BWU0 796 aaKnown RBP37.4■■■■□ 3.58
LYSMD4-207ENST00000484050 SETBP1Q9Y6X0 1596 aa37.4■■■■□ 3.58
LYSMD4-207ENST00000484050 NEXMIFQ5QGS0 1516 aa37.4■■■■□ 3.58
LYSMD4-207ENST00000484050 ROBO1Q9Y6N7 1651 aa37.39■■■■□ 3.58
LYSMD4-207ENST00000484050 PTPRUQ92729 1446 aa37.35■■■■□ 3.57
LYSMD4-207ENST00000484050 NCOA3Q9Y6Q9 1424 aa37.32■■■■□ 3.56
LYSMD4-207ENST00000484050 XRN1Q8IZH2 1706 aaKnown RBP37.3■■■■□ 3.56
LYSMD4-207ENST00000484050 AMOTL2Q9Y2J4 779 aa37.29■■■■□ 3.56
LYSMD4-207ENST00000484050 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.27■■■■□ 3.56
LYSMD4-207ENST00000484050 SLAIN2Q9P270 581 aa37.26■■■■□ 3.56
LYSMD4-207ENST00000484050 FOXD1Q16676 465 aa37.25■■■■□ 3.55
LYSMD4-207ENST00000484050 C14orf37Q86TY3 774 aa37.25■■■■□ 3.55
LYSMD4-207ENST00000484050 METP08581 1390 aa37.24■■■■□ 3.55
LYSMD4-207ENST00000484050 PPLO60437 1756 aa37.19■■■■□ 3.54
LYSMD4-207ENST00000484050 SOCS7O14512 581 aa37.18■■■■□ 3.54
LYSMD4-207ENST00000484050 C19orf44Q9H6X5 657 aa37.18■■■■□ 3.54
LYSMD4-207ENST00000484050 MPHOSPH9Q99550 1183 aa37.17■■■■□ 3.54
LYSMD4-207ENST00000484050 SETD1AO15047 1707 aaKnown RBP37.16■■■■□ 3.54
LYSMD4-207ENST00000484050 PHLPP1O60346 1717 aa37.16■■■■□ 3.54
LYSMD4-207ENST00000484050 VGFO15240 615 aaPredicted RBP37.14■■■■□ 3.54
LYSMD4-207ENST00000484050 RPGRIP1LQ68CZ1 1315 aa37.13■■■■□ 3.54
LYSMD4-207ENST00000484050 CADPS2Q86UW7 1296 aa37.13■■■■□ 3.53
LYSMD4-207ENST00000484050 SETD5Q9C0A6 1442 aa37.12■■■■□ 3.53
LYSMD4-207ENST00000484050 ATF3P18847 181 aa37.12■■■■□ 3.53
LYSMD4-207ENST00000484050 PHF23Q9BUL5 403 aaPredicted RBP37.12■■■■□ 3.53
LYSMD4-207ENST00000484050 CCDC144AA2RUR9 1427 aa37.11■■■■□ 3.53
LYSMD4-207ENST00000484050 DCCP43146 1447 aa37.07■■■■□ 3.52
LYSMD4-207ENST00000484050 COL16A1Q07092 1604 aaPredicted RBP37.06■■■■□ 3.52
LYSMD4-207ENST00000484050 NALCNQ8IZF0 1738 aa37.04■■■■□ 3.52
LYSMD4-207ENST00000484050 SPATA31E1Q6ZUB1 1445 aa37.03■■■■□ 3.52
LYSMD4-207ENST00000484050 IFT172Q9UG01 1749 aa37.03■■■■□ 3.52
LYSMD4-207ENST00000484050 ACIN1Q9UKV3 1341 aaKnown RBP37.02■■■■□ 3.52
LYSMD4-207ENST00000484050 ADGRL3Q9HAR2 1447 aa37■■■■□ 3.51
LYSMD4-207ENST00000484050 AHDC1Q5TGY3 1603 aaPredicted RBP36.99■■■■□ 3.51
LYSMD4-207ENST00000484050 RAB3GAP2Q9H2M9 1393 aa36.99■■■■□ 3.51
LYSMD4-207ENST00000484050 RGL3Q3MIN7 710 aa36.98■■■■□ 3.51
LYSMD4-207ENST00000484050 PTCH1Q13635 1447 aa36.97■■■■□ 3.51
LYSMD4-207ENST00000484050 MST1RQ04912 1400 aa36.96■■■■□ 3.51
LYSMD4-207ENST00000484050 JCADQ9P266 1359 aa36.95■■■■□ 3.51
LYSMD4-207ENST00000484050 ADGRF5Q8IZF2 1346 aa36.94■■■■□ 3.5
LYSMD4-207ENST00000484050 BRINP3Q76B58 766 aa36.94■■■■□ 3.5
LYSMD4-207ENST00000484050 ROBO2Q9HCK4 1378 aa36.93■■■■□ 3.5
LYSMD4-207ENST00000484050 RGS17Q9UGC6 210 aaPredicted RBP36.93■■■■□ 3.5
LYSMD4-207ENST00000484050 PRAG1Q86YV5 1406 aa36.93■■■■□ 3.5
LYSMD4-207ENST00000484050 ASXL1Q8IXJ9 1541 aa36.91■■■■□ 3.5
LYSMD4-207ENST00000484050 ANKRD30BQ9BXX2 1392 aa36.9■■■■□ 3.5
LYSMD4-207ENST00000484050 NHSL1Q5SYE7 1610 aa36.86■■■■□ 3.49
LYSMD4-207ENST00000484050 SHPRHQ149N8 1683 aa36.85■■■■□ 3.49
LYSMD4-207ENST00000484050 PIK3C2GO75747 1445 aa36.82■■■■□ 3.48
LYSMD4-207ENST00000484050 LRP6O75581 1613 aa36.77■■■■□ 3.48
LYSMD4-207ENST00000484050 C1orf167Q5SNV9 1468 aa36.77■■■■□ 3.48
LYSMD4-207ENST00000484050 SPATA31A6Q5VVP1 1343 aa36.77■■■■□ 3.48
LYSMD4-207ENST00000484050 KNDC1Q76NI1 1749 aa36.74■■■■□ 3.47
LYSMD4-207ENST00000484050 TECPR2O15040 1411 aa36.74■■■■□ 3.47
LYSMD4-207ENST00000484050 STK26Q9P289 416 aa36.73■■■■□ 3.47
LYSMD4-207ENST00000484050 LRPPRCP42704 1394 aaKnown RBP36.73■■■■□ 3.47
LYSMD4-207ENST00000484050 TMEM132EQ6IEE7 984 aa36.72■■■■□ 3.47
LYSMD4-207ENST00000484050 POTEAQ6S8J7 498 aa36.72■■■■□ 3.47
LYSMD4-207ENST00000484050 DDX17Q92841 729 aaKnown RBP36.72■■■■□ 3.47
LYSMD4-207ENST00000484050 MYOM2P54296 1465 aa36.71■■■■□ 3.47
LYSMD4-207ENST00000484050 NRXN1Q9ULB1 1477 aa36.71■■■■□ 3.47
LYSMD4-207ENST00000484050 CDC42BPGQ6DT37 1551 aa36.7■■■■□ 3.46
LYSMD4-207ENST00000484050 LAMC1P11047 1609 aa36.68■■■■□ 3.46
LYSMD4-207ENST00000484050 ABCC11Q96J66 1382 aa36.67■■■■□ 3.46
LYSMD4-207ENST00000484050 HRCP23327 699 aa36.67■■■■□ 3.46
LYSMD4-207ENST00000484050 ORAI2Q96SN7 254 aa36.66■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms