RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 CERKQ8TCT0 537 aa19.86■□□□□ 0.77
SSR1-208ENST00000483409 NUTM2DQ5VT03 806 aaPredicted RBP19.85■□□□□ 0.77
SSR1-208ENST00000483409 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
SSR1-208ENST00000483409 STRCP1A6NGW2 1772 aa19.85■□□□□ 0.77
SSR1-208ENST00000483409 PPP1R15AO75807 674 aaPredicted RBP19.84■□□□□ 0.77
SSR1-208ENST00000483409 ZNF326Q5BKZ1 582 aaKnown RBP19.83■□□□□ 0.77
SSR1-208ENST00000483409 HRCP23327 699 aa19.82■□□□□ 0.76
SSR1-208ENST00000483409 HDGFP51858 240 aaKnown RBP19.81■□□□□ 0.76
SSR1-208ENST00000483409 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.81■□□□□ 0.76
SSR1-208ENST00000483409 BCANQ96GW7 911 aa19.81■□□□□ 0.76
SSR1-208ENST00000483409 CCDC144AA2RUR9 1427 aa19.81■□□□□ 0.76
SSR1-208ENST00000483409 PLEKHG1Q9ULL1 1385 aa19.81■□□□□ 0.76
SSR1-208ENST00000483409 NEXMIFQ5QGS0 1516 aa19.81■□□□□ 0.76
SSR1-208ENST00000483409 SLC26A8Q96RN1 970 aa19.79■□□□□ 0.76
SSR1-208ENST00000483409 CPS1P31327 1500 aa19.79■□□□□ 0.76
SSR1-208ENST00000483409 PPLO60437 1756 aa19.77■□□□□ 0.76
SSR1-208ENST00000483409 NRXN3Q9Y4C0 1643 aa19.75■□□□□ 0.75
SSR1-208ENST00000483409 IQSEC2Q5JU85 1478 aa19.74■□□□□ 0.75
SSR1-208ENST00000483409 TRIM26Q12899 539 aaPredicted RBP19.74■□□□□ 0.75
SSR1-208ENST00000483409 ILDR1Q86SU0 546 aaPredicted RBP19.74■□□□□ 0.75
SSR1-208ENST00000483409 FBXO41Q8TF61 875 aa19.74■□□□□ 0.75
SSR1-208ENST00000483409 DIP2AQ14689 1571 aa19.74■□□□□ 0.75
SSR1-208ENST00000483409 CHD2O14647 1828 aaKnown RBP19.73■□□□□ 0.75
SSR1-208ENST00000483409 ADAMTS13Q76LX8 1427 aa19.73■□□□□ 0.75
SSR1-208ENST00000483409 SPATA31E1Q6ZUB1 1445 aa19.72■□□□□ 0.75
SSR1-208ENST00000483409 IFT172Q9UG01 1749 aa19.72■□□□□ 0.75
SSR1-208ENST00000483409 SETBP1Q9Y6X0 1596 aa19.72■□□□□ 0.75
SSR1-208ENST00000483409 NWD1Q149M9 1564 aa19.71■□□□□ 0.75
SSR1-208ENST00000483409 XIRP1Q702N8 1843 aaKnown RBP19.71■□□□□ 0.75
SSR1-208ENST00000483409 LRRC7Q96NW7 1537 aa19.71■□□□□ 0.75
SSR1-208ENST00000483409 ANKRD30BQ9BXX2 1392 aa19.7■□□□□ 0.74
SSR1-208ENST00000483409 RGL3Q3MIN7 710 aa19.7■□□□□ 0.74
SSR1-208ENST00000483409 TBX22Q9Y458 520 aa19.68■□□□□ 0.74
SSR1-208ENST00000483409 RPGRIP1LQ68CZ1 1315 aa19.68■□□□□ 0.74
SSR1-208ENST00000483409 KCNA6P17658 529 aa19.67■□□□□ 0.74
SSR1-208ENST00000483409 SETD1AO15047 1707 aaKnown RBP19.65■□□□□ 0.74
SSR1-208ENST00000483409 VGFO15240 615 aaPredicted RBP19.65■□□□□ 0.74
SSR1-208ENST00000483409 NKTRP30414 1462 aaKnown RBP19.65■□□□□ 0.74
SSR1-208ENST00000483409 PIK3R4Q99570 1358 aa19.62■□□□□ 0.73
SSR1-208ENST00000483409 UBAP1LF5GYI3 381 aa19.62■□□□□ 0.73
SSR1-208ENST00000483409 ALKQ9UM73 1620 aa19.62■□□□□ 0.73
SSR1-208ENST00000483409 PTPRUQ92729 1446 aa19.61■□□□□ 0.73
SSR1-208ENST00000483409 XRN1Q8IZH2 1706 aaKnown RBP19.61■□□□□ 0.73
SSR1-208ENST00000483409 METP08581 1390 aa19.6■□□□□ 0.73
SSR1-208ENST00000483409 TMEM94Q12767 1356 aa19.6■□□□□ 0.73
SSR1-208ENST00000483409 ADGRF5Q8IZF2 1346 aa19.6■□□□□ 0.73
SSR1-208ENST00000483409 PROSER2Q86WR7 435 aaPredicted RBP19.6■□□□□ 0.73
SSR1-208ENST00000483409 RBM33Q96EV2 1170 aaKnown RBP19.6■□□□□ 0.73
SSR1-208ENST00000483409 AMOTL2Q9Y2J4 779 aa19.57■□□□□ 0.72
SSR1-208ENST00000483409 MYOM2P54296 1465 aa19.56■□□□□ 0.72
SSR1-208ENST00000483409 PIK3C2GO75747 1445 aa19.55■□□□□ 0.72
SSR1-208ENST00000483409 DHX57Q6P158 1386 aaKnown RBP19.55■□□□□ 0.72
SSR1-208ENST00000483409 TOM1O60784 492 aa19.54■□□□□ 0.72
SSR1-208ENST00000483409 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
SSR1-208ENST00000483409 PIP4K2BP78356 416 aa19.53■□□□□ 0.72
SSR1-208ENST00000483409 NRXN1Q9ULB1 1477 aa19.53■□□□□ 0.72
SSR1-208ENST00000483409 LAMC1P11047 1609 aa19.51■□□□□ 0.71
SSR1-208ENST00000483409 ASXL1Q8IXJ9 1541 aa19.51■□□□□ 0.71
SSR1-208ENST00000483409 MSH6P52701 1360 aa19.5■□□□□ 0.71
SSR1-208ENST00000483409 C14orf37Q86TY3 774 aa19.5■□□□□ 0.71
SSR1-208ENST00000483409 DCAF11Q8TEB1 546 aa19.5■□□□□ 0.71
SSR1-208ENST00000483409 KDM2AQ9Y2K7 1162 aa19.5■□□□□ 0.71
SSR1-208ENST00000483409 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.5■□□□□ 0.71
SSR1-208ENST00000483409 PCGF6Q9BYE7 350 aa19.47■□□□□ 0.71
SSR1-208ENST00000483409 PTCH1Q13635 1447 aa19.47■□□□□ 0.71
SSR1-208ENST00000483409 NCOA3Q9Y6Q9 1424 aa19.47■□□□□ 0.71
SSR1-208ENST00000483409 KNDC1Q76NI1 1749 aa19.47■□□□□ 0.71
SSR1-208ENST00000483409 NALCNQ8IZF0 1738 aa19.47■□□□□ 0.71
SSR1-208ENST00000483409 TMEM132EQ6IEE7 984 aa19.46■□□□□ 0.71
SSR1-208ENST00000483409 SIN3AQ96ST3 1273 aa19.46■□□□□ 0.71
SSR1-208ENST00000483409 ROBO2Q9HCK4 1378 aa19.45■□□□□ 0.7
SSR1-208ENST00000483409 CFAP70Q5T0N1 1121 aa19.45■□□□□ 0.7
SSR1-208ENST00000483409 C14orf93Q9H972 538 aaKnown RBP19.45■□□□□ 0.7
SSR1-208ENST00000483409 PRAG1Q86YV5 1406 aa19.44■□□□□ 0.7
SSR1-208ENST00000483409 STK26Q9P289 416 aa19.44■□□□□ 0.7
SSR1-208ENST00000483409 NEUROD1Q13562 356 aa19.43■□□□□ 0.7
SSR1-208ENST00000483409 LRPPRCP42704 1394 aaKnown RBP19.43■□□□□ 0.7
SSR1-208ENST00000483409 ROBO1Q9Y6N7 1651 aa19.42■□□□□ 0.7
SSR1-208ENST00000483409 YTHDC2Q9H6S0 1430 aaKnown RBP19.42■□□□□ 0.7
SSR1-208ENST00000483409 C19orf44Q9H6X5 657 aa19.41■□□□□ 0.7
SSR1-208ENST00000483409 ADGRL3Q9HAR2 1447 aa19.41■□□□□ 0.7
SSR1-208ENST00000483409 STAC3Q96MF2 364 aa19.4■□□□□ 0.7
SSR1-208ENST00000483409 TECPR2O15040 1411 aa19.4■□□□□ 0.7
SSR1-208ENST00000483409 ADGRB1O14514 1584 aa19.4■□□□□ 0.7
SSR1-208ENST00000483409 ATF3P18847 181 aa19.39■□□□□ 0.69
SSR1-208ENST00000483409 HSPA1LP34931 641 aa19.38■□□□□ 0.69
SSR1-208ENST00000483409 DCCP43146 1447 aa19.38■□□□□ 0.69
SSR1-208ENST00000483409 CADPS2Q86UW7 1296 aa19.38■□□□□ 0.69
SSR1-208ENST00000483409 ABCC11Q96J66 1382 aa19.38■□□□□ 0.69
SSR1-208ENST00000483409 KIAA1210Q9ULL0 1709 aa19.37■□□□□ 0.69
SSR1-208ENST00000483409 L3MBTL2Q969R5 705 aa19.37■□□□□ 0.69
SSR1-208ENST00000483409 SLAIN2Q9P270 581 aa19.37■□□□□ 0.69
SSR1-208ENST00000483409 FAM135BQ49AJ0 1406 aa19.36■□□□□ 0.69
SSR1-208ENST00000483409 PLEKHH1Q9ULM0 1364 aa19.35■□□□□ 0.69
SSR1-208ENST00000483409 WAPLQ7Z5K2 1190 aa19.35■□□□□ 0.69
SSR1-208ENST00000483409 MST1RQ04912 1400 aa19.33■□□□□ 0.68
SSR1-208ENST00000483409 DLC1Q96QB1 1528 aa19.32■□□□□ 0.68
SSR1-208ENST00000483409 CDC42BPGQ6DT37 1551 aa19.32■□□□□ 0.68
SSR1-208ENST00000483409 PHLPP1O60346 1717 aa19.31■□□□□ 0.68
SSR1-208ENST00000483409 ARHGEF28Q8N1W1 1705 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms