RNA–Protein interactions for RNA: ENST00000482916.1

SHISA9-202, Transcript of shisa family member 9, humanhuman

TSL 4

Gene SHISA9, Length 556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-202ENST00000482916 RIMS2Q9UQ26 1411 aa20.17■□□□□ 0.82
SHISA9-202ENST00000482916 SPHKAPQ2M3C7 1700 aa20.16■□□□□ 0.82
SHISA9-202ENST00000482916 ALKQ9UM73 1620 aa20.16■□□□□ 0.82
SHISA9-202ENST00000482916 XIRP1Q702N8 1843 aaKnown RBP20.14■□□□□ 0.81
SHISA9-202ENST00000482916 PLEKHG1Q9ULL1 1385 aa20.14■□□□□ 0.81
SHISA9-202ENST00000482916 PPP1R15AO75807 674 aaPredicted RBP20.14■□□□□ 0.81
SHISA9-202ENST00000482916 CHGAP10645 457 aaKnown RBP20.14■□□□□ 0.81
SHISA9-202ENST00000482916 HDGFP51858 240 aaKnown RBP20.14■□□□□ 0.81
SHISA9-202ENST00000482916 SLC26A8Q96RN1 970 aa20.14■□□□□ 0.81
SHISA9-202ENST00000482916 HFM1A2PYH4 1435 aa20.13■□□□□ 0.81
SHISA9-202ENST00000482916 NWD1Q149M9 1564 aa20.12■□□□□ 0.81
SHISA9-202ENST00000482916 BCANQ96GW7 911 aa20.12■□□□□ 0.81
SHISA9-202ENST00000482916 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.11■□□□□ 0.81
SHISA9-202ENST00000482916 NKTRP30414 1462 aaKnown RBP20.11■□□□□ 0.81
SHISA9-202ENST00000482916 KCNA6P17658 529 aa20.1■□□□□ 0.81
SHISA9-202ENST00000482916 HSPA1LP34931 641 aa20.07■□□□□ 0.8
SHISA9-202ENST00000482916 DIP2AQ14689 1571 aa20.07■□□□□ 0.8
SHISA9-202ENST00000482916 TMEM94Q12767 1356 aa20.07■□□□□ 0.8
SHISA9-202ENST00000482916 TRPM2O94759 1503 aa20.07■□□□□ 0.8
SHISA9-202ENST00000482916 CHD2O14647 1828 aaKnown RBP20.06■□□□□ 0.8
SHISA9-202ENST00000482916 SENP3Q9H4L4 574 aaPredicted RBP20.05■□□□□ 0.8
SHISA9-202ENST00000482916 CLTCL1P53675 1640 aa20.04■□□□□ 0.8
SHISA9-202ENST00000482916 PROSER2Q86WR7 435 aaPredicted RBP20.03■□□□□ 0.8
SHISA9-202ENST00000482916 ADAMTS13Q76LX8 1427 aa20.02■□□□□ 0.8
SHISA9-202ENST00000482916 NUTM2DQ5VT03 806 aaPredicted RBP20.02■□□□□ 0.8
SHISA9-202ENST00000482916 TRIM52Q96A61 297 aa20.02■□□□□ 0.8
SHISA9-202ENST00000482916 TBX22Q9Y458 520 aa20.02■□□□□ 0.8
SHISA9-202ENST00000482916 KIF1BO60333 1816 aa20.01■□□□□ 0.79
SHISA9-202ENST00000482916 PIK3R4Q99570 1358 aa19.99■□□□□ 0.79
SHISA9-202ENST00000482916 ZNF326Q5BKZ1 582 aaKnown RBP19.99■□□□□ 0.79
SHISA9-202ENST00000482916 MSH6P52701 1360 aa19.98■□□□□ 0.79
SHISA9-202ENST00000482916 SETBP1Q9Y6X0 1596 aa19.98■□□□□ 0.79
SHISA9-202ENST00000482916 RBM33Q96EV2 1170 aaKnown RBP19.97■□□□□ 0.79
SHISA9-202ENST00000482916 SLC4A1APQ9BWU0 796 aaKnown RBP19.97■□□□□ 0.79
SHISA9-202ENST00000482916 NRXN3Q9Y4C0 1643 aa19.97■□□□□ 0.79
SHISA9-202ENST00000482916 NEXMIFQ5QGS0 1516 aa19.97■□□□□ 0.79
SHISA9-202ENST00000482916 MED1Q15648 1581 aaPredicted RBP19.96■□□□□ 0.79
SHISA9-202ENST00000482916 FAM135BQ49AJ0 1406 aa19.95■□□□□ 0.78
SHISA9-202ENST00000482916 NCOA3Q9Y6Q9 1424 aa19.93■□□□□ 0.78
SHISA9-202ENST00000482916 ROBO1Q9Y6N7 1651 aa19.93■□□□□ 0.78
SHISA9-202ENST00000482916 PTPRUQ92729 1446 aa19.9■□□□□ 0.78
SHISA9-202ENST00000482916 XRN1Q8IZH2 1706 aaKnown RBP19.9■□□□□ 0.78
SHISA9-202ENST00000482916 AMOTL2Q9Y2J4 779 aa19.88■□□□□ 0.77
SHISA9-202ENST00000482916 C14orf37Q86TY3 774 aa19.87■□□□□ 0.77
SHISA9-202ENST00000482916 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.87■□□□□ 0.77
SHISA9-202ENST00000482916 ACIN1Q9UKV3 1341 aaKnown RBP19.85■□□□□ 0.77
SHISA9-202ENST00000482916 SLAIN2Q9P270 581 aa19.85■□□□□ 0.77
SHISA9-202ENST00000482916 PPLO60437 1756 aa19.85■□□□□ 0.77
SHISA9-202ENST00000482916 CCDC144AA2RUR9 1427 aa19.85■□□□□ 0.77
SHISA9-202ENST00000482916 METP08581 1390 aa19.84■□□□□ 0.77
SHISA9-202ENST00000482916 RPGRIP1LQ68CZ1 1315 aa19.84■□□□□ 0.77
SHISA9-202ENST00000482916 FOXD1Q16676 465 aa19.84■□□□□ 0.77
SHISA9-202ENST00000482916 SETD5Q9C0A6 1442 aa19.84■□□□□ 0.77
SHISA9-202ENST00000482916 VGFO15240 615 aaPredicted RBP19.83■□□□□ 0.77
SHISA9-202ENST00000482916 CADPS2Q86UW7 1296 aa19.83■□□□□ 0.77
SHISA9-202ENST00000482916 MPHOSPH9Q99550 1183 aa19.83■□□□□ 0.77
SHISA9-202ENST00000482916 C19orf44Q9H6X5 657 aa19.83■□□□□ 0.77
SHISA9-202ENST00000482916 SETD1AO15047 1707 aaKnown RBP19.82■□□□□ 0.76
SHISA9-202ENST00000482916 DCCP43146 1447 aa19.82■□□□□ 0.76
SHISA9-202ENST00000482916 PHLPP1O60346 1717 aa19.82■□□□□ 0.76
SHISA9-202ENST00000482916 ATF3P18847 181 aa19.81■□□□□ 0.76
SHISA9-202ENST00000482916 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
SHISA9-202ENST00000482916 PTCH1Q13635 1447 aa19.76■□□□□ 0.75
SHISA9-202ENST00000482916 IFT172Q9UG01 1749 aa19.76■□□□□ 0.75
SHISA9-202ENST00000482916 RAB3GAP2Q9H2M9 1393 aa19.76■□□□□ 0.75
SHISA9-202ENST00000482916 SPATA31E1Q6ZUB1 1445 aa19.76■□□□□ 0.75
SHISA9-202ENST00000482916 ADGRL3Q9HAR2 1447 aa19.76■□□□□ 0.75
SHISA9-202ENST00000482916 NALCNQ8IZF0 1738 aa19.75■□□□□ 0.75
SHISA9-202ENST00000482916 COL16A1Q07092 1604 aaPredicted RBP19.75■□□□□ 0.75
SHISA9-202ENST00000482916 AHDC1Q5TGY3 1603 aaPredicted RBP19.75■□□□□ 0.75
SHISA9-202ENST00000482916 PRAG1Q86YV5 1406 aa19.74■□□□□ 0.75
SHISA9-202ENST00000482916 ANKRD30BQ9BXX2 1392 aa19.72■□□□□ 0.75
SHISA9-202ENST00000482916 JCADQ9P266 1359 aa19.72■□□□□ 0.75
SHISA9-202ENST00000482916 MST1RQ04912 1400 aa19.71■□□□□ 0.75
SHISA9-202ENST00000482916 RGL3Q3MIN7 710 aa19.71■□□□□ 0.75
SHISA9-202ENST00000482916 ASXL1Q8IXJ9 1541 aa19.7■□□□□ 0.74
SHISA9-202ENST00000482916 ROBO2Q9HCK4 1378 aa19.7■□□□□ 0.74
SHISA9-202ENST00000482916 BRINP3Q76B58 766 aa19.69■□□□□ 0.74
SHISA9-202ENST00000482916 ADGRF5Q8IZF2 1346 aa19.69■□□□□ 0.74
SHISA9-202ENST00000482916 NHSL1Q5SYE7 1610 aa19.66■□□□□ 0.74
SHISA9-202ENST00000482916 SHPRHQ149N8 1683 aa19.66■□□□□ 0.74
SHISA9-202ENST00000482916 PIK3C2GO75747 1445 aa19.66■□□□□ 0.74
SHISA9-202ENST00000482916 KNDC1Q76NI1 1749 aa19.63■□□□□ 0.73
SHISA9-202ENST00000482916 MYOM2P54296 1465 aa19.63■□□□□ 0.73
SHISA9-202ENST00000482916 SPATA31A6Q5VVP1 1343 aa19.63■□□□□ 0.73
SHISA9-202ENST00000482916 RGS17Q9UGC6 210 aaPredicted RBP19.63■□□□□ 0.73
SHISA9-202ENST00000482916 C1orf167Q5SNV9 1468 aa19.62■□□□□ 0.73
SHISA9-202ENST00000482916 TECPR2O15040 1411 aa19.62■□□□□ 0.73
SHISA9-202ENST00000482916 HRCP23327 699 aa19.61■□□□□ 0.73
SHISA9-202ENST00000482916 LAMC1P11047 1609 aa19.61■□□□□ 0.73
SHISA9-202ENST00000482916 CDC42BPGQ6DT37 1551 aa19.61■□□□□ 0.73
SHISA9-202ENST00000482916 LRPPRCP42704 1394 aaKnown RBP19.6■□□□□ 0.73
SHISA9-202ENST00000482916 NRXN1Q9ULB1 1477 aa19.6■□□□□ 0.73
SHISA9-202ENST00000482916 LRP6O75581 1613 aa19.58■□□□□ 0.73
SHISA9-202ENST00000482916 ABCC11Q96J66 1382 aa19.57■□□□□ 0.72
SHISA9-202ENST00000482916 STK26Q9P289 416 aa19.57■□□□□ 0.72
SHISA9-202ENST00000482916 YTHDC2Q9H6S0 1430 aaKnown RBP19.57■□□□□ 0.72
SHISA9-202ENST00000482916 TMEM132EQ6IEE7 984 aa19.56■□□□□ 0.72
SHISA9-202ENST00000482916 MEX3CQ5U5Q3 659 aaKnown RBP19.55■□□□□ 0.72
SHISA9-202ENST00000482916 DDX17Q92841 729 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms