RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 HDGFP51858 240 aaKnown RBP35.34■■■■□ 3.25
RHBDF1-208ENST00000482904 LRRC7Q96NW7 1537 aa35.33■■■■□ 3.25
RHBDF1-208ENST00000482904 SLC26A8Q96RN1 970 aa35.31■■■■□ 3.24
RHBDF1-208ENST00000482904 SENP3Q9H4L4 574 aaPredicted RBP35.3■■■■□ 3.24
RHBDF1-208ENST00000482904 SCAF1Q9H7N4 1312 aaKnown RBP35.3■■■■□ 3.24
RHBDF1-208ENST00000482904 PLEKHG1Q9ULL1 1385 aa35.29■■■■□ 3.24
RHBDF1-208ENST00000482904 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.29■■■■□ 3.24
RHBDF1-208ENST00000482904 TOM1O60784 492 aa35.28■■■■□ 3.24
RHBDF1-208ENST00000482904 TRPM2O94759 1503 aa35.26■■■■□ 3.23
RHBDF1-208ENST00000482904 PIP4K2BP78356 416 aa35.23■■■■□ 3.23
RHBDF1-208ENST00000482904 NUTM2DQ5VT03 806 aaPredicted RBP35.23■■■■□ 3.23
RHBDF1-208ENST00000482904 SLC4A1APQ9BWU0 796 aaKnown RBP35.23■■■■□ 3.23
RHBDF1-208ENST00000482904 CLTCL1P53675 1640 aa35.21■■■■□ 3.23
RHBDF1-208ENST00000482904 KCNA6P17658 529 aa35.19■■■■□ 3.22
RHBDF1-208ENST00000482904 ZNF326Q5BKZ1 582 aaKnown RBP35.18■■■■□ 3.22
RHBDF1-208ENST00000482904 NWD1Q149M9 1564 aa35.17■■■■□ 3.22
RHBDF1-208ENST00000482904 NKTRP30414 1462 aaKnown RBP35.15■■■■□ 3.22
RHBDF1-208ENST00000482904 DIP2AQ14689 1571 aa35.13■■■■□ 3.21
RHBDF1-208ENST00000482904 TMEM94Q12767 1356 aa35.12■■■■□ 3.21
RHBDF1-208ENST00000482904 ALKQ9UM73 1620 aa35.1■■■■□ 3.21
RHBDF1-208ENST00000482904 ADAMTS13Q76LX8 1427 aa35.09■■■■□ 3.21
RHBDF1-208ENST00000482904 PROSER2Q86WR7 435 aaPredicted RBP35.09■■■■□ 3.21
RHBDF1-208ENST00000482904 TBX22Q9Y458 520 aa35.08■■■■□ 3.21
RHBDF1-208ENST00000482904 KIF1BO60333 1816 aa35.06■■■■□ 3.2
RHBDF1-208ENST00000482904 XIRP1Q702N8 1843 aaKnown RBP35.06■■■■□ 3.2
RHBDF1-208ENST00000482904 SETD5Q9C0A6 1442 aa35.06■■■■□ 3.2
RHBDF1-208ENST00000482904 FOXD1Q16676 465 aa35.03■■■■□ 3.2
RHBDF1-208ENST00000482904 NEXMIFQ5QGS0 1516 aa35.02■■■■□ 3.2
RHBDF1-208ENST00000482904 RBM33Q96EV2 1170 aaKnown RBP35.02■■■■□ 3.2
RHBDF1-208ENST00000482904 HSPA1LP34931 641 aa35.01■■■■□ 3.2
RHBDF1-208ENST00000482904 PIK3R4Q99570 1358 aa35■■■■□ 3.19
RHBDF1-208ENST00000482904 SETBP1Q9Y6X0 1596 aa35■■■■□ 3.19
RHBDF1-208ENST00000482904 CHD2O14647 1828 aaKnown RBP35■■■■□ 3.19
RHBDF1-208ENST00000482904 MPHOSPH9Q99550 1183 aa35■■■■□ 3.19
RHBDF1-208ENST00000482904 ACIN1Q9UKV3 1341 aaKnown RBP35■■■■□ 3.19
RHBDF1-208ENST00000482904 CCDC144AA2RUR9 1427 aa34.97■■■■□ 3.19
RHBDF1-208ENST00000482904 NRXN3Q9Y4C0 1643 aa34.96■■■■□ 3.19
RHBDF1-208ENST00000482904 MSH6P52701 1360 aa34.96■■■■□ 3.19
RHBDF1-208ENST00000482904 RAB3GAP2Q9H2M9 1393 aa34.94■■■■□ 3.18
RHBDF1-208ENST00000482904 DISP3Q9P2K9 1392 aa34.93■■■■□ 3.18
RHBDF1-208ENST00000482904 C14orf37Q86TY3 774 aa34.9■■■■□ 3.18
RHBDF1-208ENST00000482904 AMOTL2Q9Y2J4 779 aa34.88■■■■□ 3.17
RHBDF1-208ENST00000482904 RPGRIP1LQ68CZ1 1315 aa34.87■■■■□ 3.17
RHBDF1-208ENST00000482904 PTPRUQ92729 1446 aa34.87■■■■□ 3.17
RHBDF1-208ENST00000482904 VGFO15240 615 aaPredicted RBP34.86■■■■□ 3.17
RHBDF1-208ENST00000482904 NCOA3Q9Y6Q9 1424 aa34.84■■■■□ 3.17
RHBDF1-208ENST00000482904 METP08581 1390 aa34.83■■■■□ 3.17
RHBDF1-208ENST00000482904 XRN1Q8IZH2 1706 aaKnown RBP34.82■■■■□ 3.16
RHBDF1-208ENST00000482904 FAM135BQ49AJ0 1406 aa34.81■■■■□ 3.16
RHBDF1-208ENST00000482904 PPLO60437 1756 aa34.8■■■■□ 3.16
RHBDF1-208ENST00000482904 ROBO1Q9Y6N7 1651 aa34.77■■■■□ 3.16
RHBDF1-208ENST00000482904 RGL3Q3MIN7 710 aa34.77■■■■□ 3.16
RHBDF1-208ENST00000482904 SPATA31E1Q6ZUB1 1445 aa34.76■■■■□ 3.16
RHBDF1-208ENST00000482904 C19orf44Q9H6X5 657 aa34.72■■■■□ 3.15
RHBDF1-208ENST00000482904 SLAIN2Q9P270 581 aa34.72■■■■□ 3.15
RHBDF1-208ENST00000482904 ATF3P18847 181 aa34.71■■■■□ 3.15
RHBDF1-208ENST00000482904 MED1Q15648 1581 aaPredicted RBP34.7■■■■□ 3.15
RHBDF1-208ENST00000482904 CADPS2Q86UW7 1296 aa34.7■■■■□ 3.15
RHBDF1-208ENST00000482904 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.69■■■■□ 3.14
RHBDF1-208ENST00000482904 ANKRD30BQ9BXX2 1392 aa34.69■■■■□ 3.14
RHBDF1-208ENST00000482904 SETD1AO15047 1707 aaKnown RBP34.69■■■■□ 3.14
RHBDF1-208ENST00000482904 ADGRF5Q8IZF2 1346 aa34.65■■■■□ 3.14
RHBDF1-208ENST00000482904 IFT172Q9UG01 1749 aa34.65■■■■□ 3.14
RHBDF1-208ENST00000482904 DCCP43146 1447 aa34.64■■■■□ 3.14
RHBDF1-208ENST00000482904 PTCH1Q13635 1447 aa34.64■■■■□ 3.14
RHBDF1-208ENST00000482904 HRCP23327 699 aa34.62■■■■□ 3.13
RHBDF1-208ENST00000482904 ADGRL3Q9HAR2 1447 aa34.62■■■■□ 3.13
RHBDF1-208ENST00000482904 ROBO2Q9HCK4 1378 aa34.57■■■■□ 3.12
RHBDF1-208ENST00000482904 PIK3C2GO75747 1445 aa34.56■■■■□ 3.12
RHBDF1-208ENST00000482904 PHLPP1O60346 1717 aa34.56■■■■□ 3.12
RHBDF1-208ENST00000482904 NALCNQ8IZF0 1738 aa34.56■■■■□ 3.12
RHBDF1-208ENST00000482904 PRAG1Q86YV5 1406 aa34.55■■■■□ 3.12
RHBDF1-208ENST00000482904 PHF23Q9BUL5 403 aaPredicted RBP34.54■■■■□ 3.12
RHBDF1-208ENST00000482904 MYOM2P54296 1465 aa34.52■■■■□ 3.12
RHBDF1-208ENST00000482904 ILDR2Q71H61 639 aa34.51■■■■□ 3.12
RHBDF1-208ENST00000482904 MST1RQ04912 1400 aa34.5■■■■□ 3.11
RHBDF1-208ENST00000482904 ASXL1Q8IXJ9 1541 aa34.47■■■■□ 3.11
RHBDF1-208ENST00000482904 BRINP3Q76B58 766 aa34.47■■■■□ 3.11
RHBDF1-208ENST00000482904 AHDC1Q5TGY3 1603 aaPredicted RBP34.46■■■■□ 3.11
RHBDF1-208ENST00000482904 STK26Q9P289 416 aa34.46■■■■□ 3.11
RHBDF1-208ENST00000482904 COL16A1Q07092 1604 aaPredicted RBP34.45■■■■□ 3.11
RHBDF1-208ENST00000482904 NRXN1Q9ULB1 1477 aa34.45■■■■□ 3.1
RHBDF1-208ENST00000482904 LRPPRCP42704 1394 aaKnown RBP34.44■■■■□ 3.1
RHBDF1-208ENST00000482904 TMEM132EQ6IEE7 984 aa34.43■■■■□ 3.1
RHBDF1-208ENST00000482904 JCADQ9P266 1359 aa34.43■■■■□ 3.1
RHBDF1-208ENST00000482904 LAMC1P11047 1609 aa34.43■■■■□ 3.1
RHBDF1-208ENST00000482904 TECPR2O15040 1411 aa34.41■■■■□ 3.1
RHBDF1-208ENST00000482904 YTHDC2Q9H6S0 1430 aaKnown RBP34.38■■■■□ 3.09
RHBDF1-208ENST00000482904 KNDC1Q76NI1 1749 aa34.38■■■■□ 3.09
RHBDF1-208ENST00000482904 C14orf93Q9H972 538 aaKnown RBP34.37■■■■□ 3.09
RHBDF1-208ENST00000482904 ABCC11Q96J66 1382 aa34.36■■■■□ 3.09
RHBDF1-208ENST00000482904 CFAP70Q5T0N1 1121 aa34.36■■■■□ 3.09
RHBDF1-208ENST00000482904 C1orf167Q5SNV9 1468 aa34.35■■■■□ 3.09
RHBDF1-208ENST00000482904 CDC42BPGQ6DT37 1551 aa34.35■■■■□ 3.09
RHBDF1-208ENST00000482904 DCAF11Q8TEB1 546 aa34.33■■■■□ 3.09
RHBDF1-208ENST00000482904 KDM2AQ9Y2K7 1162 aa34.32■■■■□ 3.08
RHBDF1-208ENST00000482904 DHX57Q6P158 1386 aaKnown RBP34.32■■■■□ 3.08
RHBDF1-208ENST00000482904 NHSL1Q5SYE7 1610 aa34.31■■■■□ 3.08
RHBDF1-208ENST00000482904 WAPLQ7Z5K2 1190 aa34.31■■■■□ 3.08
RHBDF1-208ENST00000482904 PLEKHH1Q9ULM0 1364 aa34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms