RNA–Protein interactions for RNA: ENST00000482747.1

NELFCD-208, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 1,701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-208ENST00000482747 MPHOSPH9Q99550 1183 aa25.34■■□□□ 1.65
NELFCD-208ENST00000482747 RIMS2Q9UQ26 1411 aa25.34■■□□□ 1.65
NELFCD-208ENST00000482747 ZFYVE9O95405 1425 aa25.33■■□□□ 1.65
NELFCD-208ENST00000482747 CLTCL1P53675 1640 aa25.32■■□□□ 1.64
NELFCD-208ENST00000482747 PPP1R15AO75807 674 aaPredicted RBP25.32■■□□□ 1.64
NELFCD-208ENST00000482747 TRPM2O94759 1503 aa25.3■■□□□ 1.64
NELFCD-208ENST00000482747 ZNF326Q5BKZ1 582 aaKnown RBP25.29■■□□□ 1.64
NELFCD-208ENST00000482747 STRCP1A6NGW2 1772 aa25.29■■□□□ 1.64
NELFCD-208ENST00000482747 HDGFP51858 240 aaKnown RBP25.24■■□□□ 1.63
NELFCD-208ENST00000482747 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.23■■□□□ 1.63
NELFCD-208ENST00000482747 PLEKHG1Q9ULL1 1385 aa25.22■■□□□ 1.63
NELFCD-208ENST00000482747 CPS1P31327 1500 aa25.21■■□□□ 1.63
NELFCD-208ENST00000482747 RBM33Q96EV2 1170 aaKnown RBP25.19■■□□□ 1.62
NELFCD-208ENST00000482747 KIF1BO60333 1816 aa25.19■■□□□ 1.62
NELFCD-208ENST00000482747 UBAP1LF5GYI3 381 aa25.18■■□□□ 1.62
NELFCD-208ENST00000482747 LRRC7Q96NW7 1537 aa25.17■■□□□ 1.62
NELFCD-208ENST00000482747 IQSEC2Q5JU85 1478 aa25.17■■□□□ 1.62
NELFCD-208ENST00000482747 CCDC144AA2RUR9 1427 aa25.15■■□□□ 1.62
NELFCD-208ENST00000482747 ADAMTS13Q76LX8 1427 aa25.15■■□□□ 1.62
NELFCD-208ENST00000482747 RGL3Q3MIN7 710 aa25.15■■□□□ 1.62
NELFCD-208ENST00000482747 NEXMIFQ5QGS0 1516 aa25.14■■□□□ 1.61
NELFCD-208ENST00000482747 KCNA6P17658 529 aa25.14■■□□□ 1.61
NELFCD-208ENST00000482747 TBX22Q9Y458 520 aa25.12■■□□□ 1.61
NELFCD-208ENST00000482747 ACIN1Q9UKV3 1341 aaKnown RBP25.11■■□□□ 1.61
NELFCD-208ENST00000482747 PIP4K2BP78356 416 aa25.09■■□□□ 1.61
NELFCD-208ENST00000482747 PROSER2Q86WR7 435 aaPredicted RBP25.09■■□□□ 1.61
NELFCD-208ENST00000482747 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
NELFCD-208ENST00000482747 HRCP23327 699 aa25.08■■□□□ 1.61
NELFCD-208ENST00000482747 NRXN3Q9Y4C0 1643 aa25.08■■□□□ 1.6
NELFCD-208ENST00000482747 XIRP1Q702N8 1843 aaKnown RBP25.07■■□□□ 1.6
NELFCD-208ENST00000482747 TMEM94Q12767 1356 aa25.06■■□□□ 1.6
NELFCD-208ENST00000482747 CHD2O14647 1828 aaKnown RBP25.05■■□□□ 1.6
NELFCD-208ENST00000482747 SPATA31E1Q6ZUB1 1445 aa25.04■■□□□ 1.6
NELFCD-208ENST00000482747 NWD1Q149M9 1564 aa25.03■■□□□ 1.6
NELFCD-208ENST00000482747 VGFO15240 615 aaPredicted RBP25.03■■□□□ 1.6
NELFCD-208ENST00000482747 TOM1O60784 492 aa25.03■■□□□ 1.6
NELFCD-208ENST00000482747 PTPRUQ92729 1446 aa25.03■■□□□ 1.6
NELFCD-208ENST00000482747 METP08581 1390 aa25.03■■□□□ 1.6
NELFCD-208ENST00000482747 SETBP1Q9Y6X0 1596 aa25.03■■□□□ 1.6
NELFCD-208ENST00000482747 ALKQ9UM73 1620 aa25.02■■□□□ 1.6
NELFCD-208ENST00000482747 RPGRIP1LQ68CZ1 1315 aa25.02■■□□□ 1.6
NELFCD-208ENST00000482747 AMOTL2Q9Y2J4 779 aa25.02■■□□□ 1.6
NELFCD-208ENST00000482747 ANKRD30BQ9BXX2 1392 aa25.02■■□□□ 1.6
NELFCD-208ENST00000482747 PPLO60437 1756 aa25.01■■□□□ 1.59
NELFCD-208ENST00000482747 DIP2AQ14689 1571 aa25.01■■□□□ 1.59
NELFCD-208ENST00000482747 ADGRF5Q8IZF2 1346 aa25.01■■□□□ 1.59
NELFCD-208ENST00000482747 NKTRP30414 1462 aaKnown RBP24.99■■□□□ 1.59
NELFCD-208ENST00000482747 PIK3R4Q99570 1358 aa24.96■■□□□ 1.59
NELFCD-208ENST00000482747 C14orf37Q86TY3 774 aa24.93■■□□□ 1.58
NELFCD-208ENST00000482747 TRIM26Q12899 539 aaPredicted RBP24.92■■□□□ 1.58
NELFCD-208ENST00000482747 IFT172Q9UG01 1749 aa24.92■■□□□ 1.58
NELFCD-208ENST00000482747 HSPA1LP34931 641 aa24.9■■□□□ 1.58
NELFCD-208ENST00000482747 SETD1AO15047 1707 aaKnown RBP24.9■■□□□ 1.58
NELFCD-208ENST00000482747 MSH6P52701 1360 aa24.89■■□□□ 1.57
NELFCD-208ENST00000482747 XRN1Q8IZH2 1706 aaKnown RBP24.88■■□□□ 1.57
NELFCD-208ENST00000482747 KDM2AQ9Y2K7 1162 aa24.87■■□□□ 1.57
NELFCD-208ENST00000482747 TMEM132EQ6IEE7 984 aa24.86■■□□□ 1.57
NELFCD-208ENST00000482747 DCAF11Q8TEB1 546 aa24.84■■□□□ 1.57
NELFCD-208ENST00000482747 STK26Q9P289 416 aa24.84■■□□□ 1.57
NELFCD-208ENST00000482747 PIK3C2GO75747 1445 aa24.83■■□□□ 1.57
NELFCD-208ENST00000482747 CFAP70Q5T0N1 1121 aa24.82■■□□□ 1.56
NELFCD-208ENST00000482747 ROBO2Q9HCK4 1378 aa24.82■■□□□ 1.56
NELFCD-208ENST00000482747 C19orf44Q9H6X5 657 aa24.81■■□□□ 1.56
NELFCD-208ENST00000482747 SLAIN2Q9P270 581 aa24.81■■□□□ 1.56
NELFCD-208ENST00000482747 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.8■■□□□ 1.56
NELFCD-208ENST00000482747 NCOA3Q9Y6Q9 1424 aa24.79■■□□□ 1.56
NELFCD-208ENST00000482747 DHX57Q6P158 1386 aaKnown RBP24.78■■□□□ 1.56
NELFCD-208ENST00000482747 ASXL1Q8IXJ9 1541 aa24.78■■□□□ 1.56
NELFCD-208ENST00000482747 MYOM2P54296 1465 aa24.78■■□□□ 1.56
NELFCD-208ENST00000482747 ATF3P18847 181 aa24.78■■□□□ 1.56
NELFCD-208ENST00000482747 SIN3AQ96ST3 1273 aa24.78■■□□□ 1.56
NELFCD-208ENST00000482747 C14orf93Q9H972 538 aaKnown RBP24.77■■□□□ 1.56
NELFCD-208ENST00000482747 NRXN1Q9ULB1 1477 aa24.76■■□□□ 1.55
NELFCD-208ENST00000482747 ROBO1Q9Y6N7 1651 aa24.76■■□□□ 1.55
NELFCD-208ENST00000482747 WAPLQ7Z5K2 1190 aa24.75■■□□□ 1.55
NELFCD-208ENST00000482747 CADPS2Q86UW7 1296 aa24.75■■□□□ 1.55
NELFCD-208ENST00000482747 FAM135BQ49AJ0 1406 aa24.74■■□□□ 1.55
NELFCD-208ENST00000482747 PTCH1Q13635 1447 aa24.73■■□□□ 1.55
NELFCD-208ENST00000482747 NEUROD1Q13562 356 aa24.72■■□□□ 1.55
NELFCD-208ENST00000482747 NALCNQ8IZF0 1738 aa24.72■■□□□ 1.55
NELFCD-208ENST00000482747 ADGRL3Q9HAR2 1447 aa24.71■■□□□ 1.55
NELFCD-208ENST00000482747 LRPPRCP42704 1394 aaKnown RBP24.7■■□□□ 1.54
NELFCD-208ENST00000482747 YTHDC2Q9H6S0 1430 aaKnown RBP24.7■■□□□ 1.54
NELFCD-208ENST00000482747 PLEKHH1Q9ULM0 1364 aa24.69■■□□□ 1.54
NELFCD-208ENST00000482747 PRAG1Q86YV5 1406 aa24.67■■□□□ 1.54
NELFCD-208ENST00000482747 ABCC11Q96J66 1382 aa24.67■■□□□ 1.54
NELFCD-208ENST00000482747 SAFB2Q14151 953 aaKnown RBP eCLIP24.65■■□□□ 1.54
NELFCD-208ENST00000482747 DCCP43146 1447 aa24.65■■□□□ 1.54
NELFCD-208ENST00000482747 MST1RQ04912 1400 aa24.65■■□□□ 1.54
NELFCD-208ENST00000482747 BRINP3Q76B58 766 aa24.64■■□□□ 1.54
NELFCD-208ENST00000482747 PCGF6Q9BYE7 350 aa24.64■■□□□ 1.54
NELFCD-208ENST00000482747 TECPR2O15040 1411 aa24.64■■□□□ 1.54
NELFCD-208ENST00000482747 LAMC1P11047 1609 aa24.64■■□□□ 1.53
NELFCD-208ENST00000482747 L3MBTL2Q969R5 705 aa24.63■■□□□ 1.53
NELFCD-208ENST00000482747 TRAK1Q9UPV9 953 aa24.63■■□□□ 1.53
NELFCD-208ENST00000482747 NUTM2FA1L443 756 aa24.62■■□□□ 1.53
NELFCD-208ENST00000482747 ADGRB1O14514 1584 aa24.62■■□□□ 1.53
NELFCD-208ENST00000482747 DDX17Q92841 729 aaKnown RBP24.61■■□□□ 1.53
NELFCD-208ENST00000482747 DISP3Q9P2K9 1392 aa24.61■■□□□ 1.53
NELFCD-208ENST00000482747 PRAM1Q96QH2 718 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms