RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 PPP1R15AO75807 674 aaPredicted RBP24.46■■□□□ 1.51
HMGN1-214ENST00000482733 CCDC144AA2RUR9 1427 aa24.45■■□□□ 1.51
HMGN1-214ENST00000482733 ZNF326Q5BKZ1 582 aaKnown RBP24.45■■□□□ 1.5
HMGN1-214ENST00000482733 ZNF335Q9H4Z2 1342 aaPredicted RBP24.43■■□□□ 1.5
HMGN1-214ENST00000482733 PLEKHG1Q9ULL1 1385 aa24.42■■□□□ 1.5
HMGN1-214ENST00000482733 CERKQ8TCT0 537 aa24.41■■□□□ 1.5
HMGN1-214ENST00000482733 BCANQ96GW7 911 aa24.4■■□□□ 1.5
HMGN1-214ENST00000482733 MYO5BQ9ULV0 1848 aa24.4■■□□□ 1.5
HMGN1-214ENST00000482733 LTBP4Q8N2S1 1624 aa24.39■■□□□ 1.5
HMGN1-214ENST00000482733 RPGRIP1LQ68CZ1 1315 aa24.38■■□□□ 1.49
HMGN1-214ENST00000482733 KIF1BO60333 1816 aa24.37■■□□□ 1.49
HMGN1-214ENST00000482733 NUTM2DQ5VT03 806 aaPredicted RBP24.36■■□□□ 1.49
HMGN1-214ENST00000482733 ANKRD30BQ9BXX2 1392 aa24.35■■□□□ 1.49
HMGN1-214ENST00000482733 SLC26A8Q96RN1 970 aa24.34■■□□□ 1.49
HMGN1-214ENST00000482733 CPS1P31327 1500 aa24.33■■□□□ 1.49
HMGN1-214ENST00000482733 VGFO15240 615 aaPredicted RBP24.32■■□□□ 1.48
HMGN1-214ENST00000482733 TBX22Q9Y458 520 aa24.32■■□□□ 1.48
HMGN1-214ENST00000482733 SPATA31E1Q6ZUB1 1445 aa24.32■■□□□ 1.48
HMGN1-214ENST00000482733 NEXMIFQ5QGS0 1516 aa24.31■■□□□ 1.48
HMGN1-214ENST00000482733 IQSEC2Q5JU85 1478 aa24.31■■□□□ 1.48
HMGN1-214ENST00000482733 KCNA6P17658 529 aa24.28■■□□□ 1.48
HMGN1-214ENST00000482733 RGL3Q3MIN7 710 aa24.28■■□□□ 1.48
HMGN1-214ENST00000482733 ADAMTS13Q76LX8 1427 aa24.27■■□□□ 1.48
HMGN1-214ENST00000482733 SENP3Q9H4L4 574 aaPredicted RBP24.27■■□□□ 1.48
HMGN1-214ENST00000482733 DIP2AQ14689 1571 aa24.26■■□□□ 1.47
HMGN1-214ENST00000482733 FBXO41Q8TF61 875 aa24.25■■□□□ 1.47
HMGN1-214ENST00000482733 PIK3R4Q99570 1358 aa24.25■■□□□ 1.47
HMGN1-214ENST00000482733 SETBP1Q9Y6X0 1596 aa24.25■■□□□ 1.47
HMGN1-214ENST00000482733 LRRC7Q96NW7 1537 aa24.19■■□□□ 1.46
HMGN1-214ENST00000482733 NWD1Q149M9 1564 aa24.18■■□□□ 1.46
HMGN1-214ENST00000482733 PPLO60437 1756 aa24.18■■□□□ 1.46
HMGN1-214ENST00000482733 NKTRP30414 1462 aaKnown RBP24.18■■□□□ 1.46
HMGN1-214ENST00000482733 NRXN3Q9Y4C0 1643 aa24.17■■□□□ 1.46
HMGN1-214ENST00000482733 STRCP1A6NGW2 1772 aa24.16■■□□□ 1.46
HMGN1-214ENST00000482733 ADGRF5Q8IZF2 1346 aa24.15■■□□□ 1.46
HMGN1-214ENST00000482733 PROSER2Q86WR7 435 aaPredicted RBP24.15■■□□□ 1.46
HMGN1-214ENST00000482733 STAC3Q96MF2 364 aa24.15■■□□□ 1.46
HMGN1-214ENST00000482733 DHX57Q6P158 1386 aaKnown RBP24.15■■□□□ 1.46
HMGN1-214ENST00000482733 ILDR1Q86SU0 546 aaPredicted RBP24.14■■□□□ 1.45
HMGN1-214ENST00000482733 AMOTL2Q9Y2J4 779 aa24.13■■□□□ 1.45
HMGN1-214ENST00000482733 METP08581 1390 aa24.13■■□□□ 1.45
HMGN1-214ENST00000482733 MYOM2P54296 1465 aa24.13■■□□□ 1.45
HMGN1-214ENST00000482733 IFT172Q9UG01 1749 aa24.11■■□□□ 1.45
HMGN1-214ENST00000482733 PCGF6Q9BYE7 350 aa24.11■■□□□ 1.45
HMGN1-214ENST00000482733 CHD2O14647 1828 aaKnown RBP24.11■■□□□ 1.45
HMGN1-214ENST00000482733 TMEM94Q12767 1356 aa24.11■■□□□ 1.45
HMGN1-214ENST00000482733 UBAP1LF5GYI3 381 aa24.1■■□□□ 1.45
HMGN1-214ENST00000482733 ALKQ9UM73 1620 aa24.1■■□□□ 1.45
HMGN1-214ENST00000482733 PIK3C2GO75747 1445 aa24.1■■□□□ 1.45
HMGN1-214ENST00000482733 PTPRUQ92729 1446 aa24.1■■□□□ 1.45
HMGN1-214ENST00000482733 TOM1O60784 492 aa24.09■■□□□ 1.45
HMGN1-214ENST00000482733 NRXN1Q9ULB1 1477 aa24.08■■□□□ 1.45
HMGN1-214ENST00000482733 DCAF11Q8TEB1 546 aa24.08■■□□□ 1.45
HMGN1-214ENST00000482733 NCOA3Q9Y6Q9 1424 aa24.08■■□□□ 1.44
HMGN1-214ENST00000482733 C14orf93Q9H972 538 aaKnown RBP24.04■■□□□ 1.44
HMGN1-214ENST00000482733 KDM2AQ9Y2K7 1162 aa24.04■■□□□ 1.44
HMGN1-214ENST00000482733 XRN1Q8IZH2 1706 aaKnown RBP24.02■■□□□ 1.44
HMGN1-214ENST00000482733 RBM33Q96EV2 1170 aaKnown RBP24.02■■□□□ 1.44
HMGN1-214ENST00000482733 MSH6P52701 1360 aa24.02■■□□□ 1.44
HMGN1-214ENST00000482733 SETD1AO15047 1707 aaKnown RBP24.01■■□□□ 1.43
HMGN1-214ENST00000482733 SIN3AQ96ST3 1273 aa24.01■■□□□ 1.43
HMGN1-214ENST00000482733 PRAG1Q86YV5 1406 aa24.01■■□□□ 1.43
HMGN1-214ENST00000482733 C14orf37Q86TY3 774 aa24■■□□□ 1.43
HMGN1-214ENST00000482733 PTCH1Q13635 1447 aa24■■□□□ 1.43
HMGN1-214ENST00000482733 NEUROD1Q13562 356 aa23.99■■□□□ 1.43
HMGN1-214ENST00000482733 CFAP70Q5T0N1 1121 aa23.99■■□□□ 1.43
HMGN1-214ENST00000482733 LRPPRCP42704 1394 aaKnown RBP23.97■■□□□ 1.43
HMGN1-214ENST00000482733 C19orf44Q9H6X5 657 aa23.97■■□□□ 1.43
HMGN1-214ENST00000482733 XIRP1Q702N8 1843 aaKnown RBP23.96■■□□□ 1.43
HMGN1-214ENST00000482733 LAMC1P11047 1609 aa23.96■■□□□ 1.43
HMGN1-214ENST00000482733 TMEM132EQ6IEE7 984 aa23.96■■□□□ 1.43
HMGN1-214ENST00000482733 ABCC11Q96J66 1382 aa23.95■■□□□ 1.42
HMGN1-214ENST00000482733 PIP4K2BP78356 416 aa23.95■■□□□ 1.42
HMGN1-214ENST00000482733 ROBO2Q9HCK4 1378 aa23.94■■□□□ 1.42
HMGN1-214ENST00000482733 SCAF1Q9H7N4 1312 aaKnown RBP23.94■■□□□ 1.42
HMGN1-214ENST00000482733 TECPR2O15040 1411 aa23.93■■□□□ 1.42
HMGN1-214ENST00000482733 L3MBTL2Q969R5 705 aa23.93■■□□□ 1.42
HMGN1-214ENST00000482733 STK26Q9P289 416 aa23.93■■□□□ 1.42
HMGN1-214ENST00000482733 YTHDC2Q9H6S0 1430 aaKnown RBP23.93■■□□□ 1.42
HMGN1-214ENST00000482733 ATF3P18847 181 aa23.92■■□□□ 1.42
HMGN1-214ENST00000482733 CADPS2Q86UW7 1296 aa23.92■■□□□ 1.42
HMGN1-214ENST00000482733 ASXL1Q8IXJ9 1541 aa23.92■■□□□ 1.42
HMGN1-214ENST00000482733 SIRT1Q96EB6 747 aa23.91■■□□□ 1.42
HMGN1-214ENST00000482733 DCCP43146 1447 aa23.9■■□□□ 1.42
HMGN1-214ENST00000482733 ADGRL3Q9HAR2 1447 aa23.89■■□□□ 1.41
HMGN1-214ENST00000482733 SLAIN2Q9P270 581 aa23.87■■□□□ 1.41
HMGN1-214ENST00000482733 ADGRB1O14514 1584 aa23.86■■□□□ 1.41
HMGN1-214ENST00000482733 CLSPNQ9HAW4 1339 aa23.86■■□□□ 1.41
HMGN1-214ENST00000482733 FAM135BQ49AJ0 1406 aa23.86■■□□□ 1.41
HMGN1-214ENST00000482733 TONSLQ96HA7 1378 aa23.86■■□□□ 1.41
HMGN1-214ENST00000482733 KNDC1Q76NI1 1749 aa23.84■■□□□ 1.41
HMGN1-214ENST00000482733 WAPLQ7Z5K2 1190 aa23.83■■□□□ 1.41
HMGN1-214ENST00000482733 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.83■■□□□ 1.41
HMGN1-214ENST00000482733 DLC1Q96QB1 1528 aa23.82■■□□□ 1.4
HMGN1-214ENST00000482733 KIAA1210Q9ULL0 1709 aa23.79■■□□□ 1.4
HMGN1-214ENST00000482733 PRAM1Q96QH2 718 aa23.79■■□□□ 1.4
HMGN1-214ENST00000482733 POGKQ9P215 609 aa23.79■■□□□ 1.4
HMGN1-214ENST00000482733 TRAK1Q9UPV9 953 aa23.79■■□□□ 1.4
HMGN1-214ENST00000482733 PLEKHH1Q9ULM0 1364 aa23.78■■□□□ 1.4
HMGN1-214ENST00000482733 HSPA1LP34931 641 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 478 ms