RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 RIMS2Q9UQ26 1411 aa27.23■■□□□ 1.95
SMIM4-204ENST00000482728 ZNF326Q5BKZ1 582 aaKnown RBP27.22■■□□□ 1.95
SMIM4-204ENST00000482728 LTBP4Q8N2S1 1624 aa27.22■■□□□ 1.95
SMIM4-204ENST00000482728 MYO5BQ9ULV0 1848 aa27.21■■□□□ 1.95
SMIM4-204ENST00000482728 HRCP23327 699 aa27.2■■□□□ 1.94
SMIM4-204ENST00000482728 NUTM2DQ5VT03 806 aaPredicted RBP27.19■■□□□ 1.94
SMIM4-204ENST00000482728 TRPM2O94759 1503 aa27.19■■□□□ 1.94
SMIM4-204ENST00000482728 SENP3Q9H4L4 574 aaPredicted RBP27.18■■□□□ 1.94
SMIM4-204ENST00000482728 ZFYVE9O95405 1425 aa27.17■■□□□ 1.94
SMIM4-204ENST00000482728 SLC26A8Q96RN1 970 aa27.17■■□□□ 1.94
SMIM4-204ENST00000482728 CLTCL1P53675 1640 aa27.13■■□□□ 1.93
SMIM4-204ENST00000482728 PLEKHG1Q9ULL1 1385 aa27.12■■□□□ 1.93
SMIM4-204ENST00000482728 CPS1P31327 1500 aa27.11■■□□□ 1.93
SMIM4-204ENST00000482728 KIF1BO60333 1816 aa27.09■■□□□ 1.93
SMIM4-204ENST00000482728 CCDC144AA2RUR9 1427 aa27.09■■□□□ 1.93
SMIM4-204ENST00000482728 IQSEC2Q5JU85 1478 aa27.07■■□□□ 1.92
SMIM4-204ENST00000482728 TBX22Q9Y458 520 aa27.06■■□□□ 1.92
SMIM4-204ENST00000482728 KCNA6P17658 529 aa27.05■■□□□ 1.92
SMIM4-204ENST00000482728 RPGRIP1LQ68CZ1 1315 aa27.04■■□□□ 1.92
SMIM4-204ENST00000482728 VGFO15240 615 aaPredicted RBP27.03■■□□□ 1.92
SMIM4-204ENST00000482728 UBAP1LF5GYI3 381 aa27.02■■□□□ 1.92
SMIM4-204ENST00000482728 RGL3Q3MIN7 710 aa27.02■■□□□ 1.92
SMIM4-204ENST00000482728 TRIM26Q12899 539 aaPredicted RBP26.99■■□□□ 1.91
SMIM4-204ENST00000482728 PROSER2Q86WR7 435 aaPredicted RBP26.98■■□□□ 1.91
SMIM4-204ENST00000482728 STRCP1A6NGW2 1772 aa26.98■■□□□ 1.91
SMIM4-204ENST00000482728 LRRC7Q96NW7 1537 aa26.96■■□□□ 1.91
SMIM4-204ENST00000482728 ADAMTS13Q76LX8 1427 aa26.96■■□□□ 1.91
SMIM4-204ENST00000482728 NEXMIFQ5QGS0 1516 aa26.95■■□□□ 1.91
SMIM4-204ENST00000482728 TOM1O60784 492 aa26.95■■□□□ 1.9
SMIM4-204ENST00000482728 ANKRD30BQ9BXX2 1392 aa26.93■■□□□ 1.9
SMIM4-204ENST00000482728 SPATA31E1Q6ZUB1 1445 aa26.92■■□□□ 1.9
SMIM4-204ENST00000482728 PIK3R4Q99570 1358 aa26.92■■□□□ 1.9
SMIM4-204ENST00000482728 DIP2AQ14689 1571 aa26.91■■□□□ 1.9
SMIM4-204ENST00000482728 AMOTL2Q9Y2J4 779 aa26.89■■□□□ 1.9
SMIM4-204ENST00000482728 SETBP1Q9Y6X0 1596 aa26.88■■□□□ 1.89
SMIM4-204ENST00000482728 TMEM94Q12767 1356 aa26.88■■□□□ 1.89
SMIM4-204ENST00000482728 RBM33Q96EV2 1170 aaKnown RBP26.88■■□□□ 1.89
SMIM4-204ENST00000482728 CHD2O14647 1828 aaKnown RBP26.88■■□□□ 1.89
SMIM4-204ENST00000482728 SCAF1Q9H7N4 1312 aaKnown RBP26.88■■□□□ 1.89
SMIM4-204ENST00000482728 NKTRP30414 1462 aaKnown RBP26.87■■□□□ 1.89
SMIM4-204ENST00000482728 PIP4K2BP78356 416 aa26.86■■□□□ 1.89
SMIM4-204ENST00000482728 NWD1Q149M9 1564 aa26.84■■□□□ 1.89
SMIM4-204ENST00000482728 ADGRF5Q8IZF2 1346 aa26.84■■□□□ 1.89
SMIM4-204ENST00000482728 PPLO60437 1756 aa26.84■■□□□ 1.89
SMIM4-204ENST00000482728 C14orf37Q86TY3 774 aa26.83■■□□□ 1.89
SMIM4-204ENST00000482728 METP08581 1390 aa26.83■■□□□ 1.88
SMIM4-204ENST00000482728 NRXN3Q9Y4C0 1643 aa26.83■■□□□ 1.88
SMIM4-204ENST00000482728 PTPRUQ92729 1446 aa26.8■■□□□ 1.88
SMIM4-204ENST00000482728 MSH6P52701 1360 aa26.77■■□□□ 1.88
SMIM4-204ENST00000482728 XIRP1Q702N8 1843 aaKnown RBP26.76■■□□□ 1.88
SMIM4-204ENST00000482728 ALKQ9UM73 1620 aa26.76■■□□□ 1.87
SMIM4-204ENST00000482728 DCAF11Q8TEB1 546 aa26.74■■□□□ 1.87
SMIM4-204ENST00000482728 KDM2AQ9Y2K7 1162 aa26.74■■□□□ 1.87
SMIM4-204ENST00000482728 NCOA3Q9Y6Q9 1424 aa26.73■■□□□ 1.87
SMIM4-204ENST00000482728 C19orf44Q9H6X5 657 aa26.72■■□□□ 1.87
SMIM4-204ENST00000482728 IFT172Q9UG01 1749 aa26.72■■□□□ 1.87
SMIM4-204ENST00000482728 STAC3Q96MF2 364 aa26.71■■□□□ 1.87
SMIM4-204ENST00000482728 ATF3P18847 181 aa26.69■■□□□ 1.86
SMIM4-204ENST00000482728 PIK3C2GO75747 1445 aa26.68■■□□□ 1.86
SMIM4-204ENST00000482728 TMEM132EQ6IEE7 984 aa26.68■■□□□ 1.86
SMIM4-204ENST00000482728 C14orf93Q9H972 538 aaKnown RBP26.68■■□□□ 1.86
SMIM4-204ENST00000482728 XRN1Q8IZH2 1706 aaKnown RBP26.68■■□□□ 1.86
SMIM4-204ENST00000482728 SLAIN2Q9P270 581 aa26.67■■□□□ 1.86
SMIM4-204ENST00000482728 STK26Q9P289 416 aa26.67■■□□□ 1.86
SMIM4-204ENST00000482728 MYOM2P54296 1465 aa26.67■■□□□ 1.86
SMIM4-204ENST00000482728 CFAP70Q5T0N1 1121 aa26.66■■□□□ 1.86
SMIM4-204ENST00000482728 CADPS2Q86UW7 1296 aa26.66■■□□□ 1.86
SMIM4-204ENST00000482728 HSPA1LP34931 641 aa26.65■■□□□ 1.86
SMIM4-204ENST00000482728 SETD1AO15047 1707 aaKnown RBP26.65■■□□□ 1.86
SMIM4-204ENST00000482728 NRXN1Q9ULB1 1477 aa26.62■■□□□ 1.85
SMIM4-204ENST00000482728 DHX57Q6P158 1386 aaKnown RBP26.62■■□□□ 1.85
SMIM4-204ENST00000482728 ROBO2Q9HCK4 1378 aa26.61■■□□□ 1.85
SMIM4-204ENST00000482728 NEUROD1Q13562 356 aa26.61■■□□□ 1.85
SMIM4-204ENST00000482728 SIN3AQ96ST3 1273 aa26.61■■□□□ 1.85
SMIM4-204ENST00000482728 LRPPRCP42704 1394 aaKnown RBP26.59■■□□□ 1.85
SMIM4-204ENST00000482728 PTCH1Q13635 1447 aa26.59■■□□□ 1.85
SMIM4-204ENST00000482728 FAM135BQ49AJ0 1406 aa26.59■■□□□ 1.85
SMIM4-204ENST00000482728 ABCC11Q96J66 1382 aa26.58■■□□□ 1.84
SMIM4-204ENST00000482728 PCGF6Q9BYE7 350 aa26.57■■□□□ 1.84
SMIM4-204ENST00000482728 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.56■■□□□ 1.84
SMIM4-204ENST00000482728 PRAG1Q86YV5 1406 aa26.56■■□□□ 1.84
SMIM4-204ENST00000482728 YTHDC2Q9H6S0 1430 aaKnown RBP26.56■■□□□ 1.84
SMIM4-204ENST00000482728 ADGRL3Q9HAR2 1447 aa26.55■■□□□ 1.84
SMIM4-204ENST00000482728 WAPLQ7Z5K2 1190 aa26.54■■□□□ 1.84
SMIM4-204ENST00000482728 DCCP43146 1447 aa26.54■■□□□ 1.84
SMIM4-204ENST00000482728 LAMC1P11047 1609 aa26.53■■□□□ 1.84
SMIM4-204ENST00000482728 L3MBTL2Q969R5 705 aa26.52■■□□□ 1.84
SMIM4-204ENST00000482728 SIRT1Q96EB6 747 aa26.52■■□□□ 1.84
SMIM4-204ENST00000482728 ASXL1Q8IXJ9 1541 aa26.51■■□□□ 1.83
SMIM4-204ENST00000482728 TECPR2O15040 1411 aa26.51■■□□□ 1.83
SMIM4-204ENST00000482728 ROBO1Q9Y6N7 1651 aa26.48■■□□□ 1.83
SMIM4-204ENST00000482728 POGKQ9P215 609 aa26.47■■□□□ 1.83
SMIM4-204ENST00000482728 TRAK1Q9UPV9 953 aa26.46■■□□□ 1.83
SMIM4-204ENST00000482728 PRAM1Q96QH2 718 aa26.45■■□□□ 1.82
SMIM4-204ENST00000482728 NALCNQ8IZF0 1738 aa26.45■■□□□ 1.82
SMIM4-204ENST00000482728 PLEKHH1Q9ULM0 1364 aa26.44■■□□□ 1.82
SMIM4-204ENST00000482728 MST1RQ04912 1400 aa26.43■■□□□ 1.82
SMIM4-204ENST00000482728 SAFB2Q14151 953 aaKnown RBP eCLIP26.43■■□□□ 1.82
SMIM4-204ENST00000482728 BRINP3Q76B58 766 aa26.43■■□□□ 1.82
SMIM4-204ENST00000482728 KNDC1Q76NI1 1749 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms