RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ZFYVE9O95405 1425 aa30.79■■■□□ 2.52
SEC13-217ENST00000482647 CCDC144AA2RUR9 1427 aa30.78■■■□□ 2.52
SEC13-217ENST00000482647 BCANQ96GW7 911 aa30.76■■■□□ 2.51
SEC13-217ENST00000482647 ZNF335Q9H4Z2 1342 aaPredicted RBP30.75■■■□□ 2.51
SEC13-217ENST00000482647 NUTM2DQ5VT03 806 aaPredicted RBP30.74■■■□□ 2.51
SEC13-217ENST00000482647 IQGAP1P46940 1657 aa30.74■■■□□ 2.51
SEC13-217ENST00000482647 MYO5BQ9ULV0 1848 aa30.72■■■□□ 2.51
SEC13-217ENST00000482647 PLEKHG1Q9ULL1 1385 aa30.71■■■□□ 2.51
SEC13-217ENST00000482647 CERKQ8TCT0 537 aa30.7■■■□□ 2.51
SEC13-217ENST00000482647 SLC26A8Q96RN1 970 aa30.68■■■□□ 2.5
SEC13-217ENST00000482647 RPGRIP1LQ68CZ1 1315 aa30.68■■■□□ 2.5
SEC13-217ENST00000482647 ANKRD30BQ9BXX2 1392 aa30.67■■■□□ 2.5
SEC13-217ENST00000482647 SENP3Q9H4L4 574 aaPredicted RBP30.67■■■□□ 2.5
SEC13-217ENST00000482647 KIF1BO60333 1816 aa30.66■■■□□ 2.5
SEC13-217ENST00000482647 LTBP4Q8N2S1 1624 aa30.64■■■□□ 2.5
SEC13-217ENST00000482647 VGFO15240 615 aaPredicted RBP30.63■■■□□ 2.49
SEC13-217ENST00000482647 RGL3Q3MIN7 710 aa30.63■■■□□ 2.49
SEC13-217ENST00000482647 TBX22Q9Y458 520 aa30.61■■■□□ 2.49
SEC13-217ENST00000482647 SPATA31E1Q6ZUB1 1445 aa30.61■■■□□ 2.49
SEC13-217ENST00000482647 NEXMIFQ5QGS0 1516 aa30.57■■■□□ 2.49
SEC13-217ENST00000482647 KCNA6P17658 529 aa30.55■■■□□ 2.48
SEC13-217ENST00000482647 CPS1P31327 1500 aa30.55■■■□□ 2.48
SEC13-217ENST00000482647 ADAMTS13Q76LX8 1427 aa30.53■■■□□ 2.48
SEC13-217ENST00000482647 PCGF6Q9BYE7 350 aa30.49■■■□□ 2.47
SEC13-217ENST00000482647 IQSEC2Q5JU85 1478 aa30.48■■■□□ 2.47
SEC13-217ENST00000482647 DIP2AQ14689 1571 aa30.47■■■□□ 2.47
SEC13-217ENST00000482647 SETBP1Q9Y6X0 1596 aa30.47■■■□□ 2.47
SEC13-217ENST00000482647 PIK3R4Q99570 1358 aa30.47■■■□□ 2.47
SEC13-217ENST00000482647 FBXO41Q8TF61 875 aa30.46■■■□□ 2.47
SEC13-217ENST00000482647 ADGRF5Q8IZF2 1346 aa30.45■■■□□ 2.46
SEC13-217ENST00000482647 DHX57Q6P158 1386 aaKnown RBP30.44■■■□□ 2.46
SEC13-217ENST00000482647 LRRC7Q96NW7 1537 aa30.42■■■□□ 2.46
SEC13-217ENST00000482647 PPLO60437 1756 aa30.41■■■□□ 2.46
SEC13-217ENST00000482647 PROSER2Q86WR7 435 aaPredicted RBP30.41■■■□□ 2.46
SEC13-217ENST00000482647 STRCP1A6NGW2 1772 aa30.4■■■□□ 2.46
SEC13-217ENST00000482647 METP08581 1390 aa30.4■■■□□ 2.46
SEC13-217ENST00000482647 AMOTL2Q9Y2J4 779 aa30.39■■■□□ 2.46
SEC13-217ENST00000482647 NRXN3Q9Y4C0 1643 aa30.39■■■□□ 2.46
SEC13-217ENST00000482647 DCAF11Q8TEB1 546 aa30.37■■■□□ 2.45
SEC13-217ENST00000482647 STAC3Q96MF2 364 aa30.37■■■□□ 2.45
SEC13-217ENST00000482647 ILDR1Q86SU0 546 aaPredicted RBP30.36■■■□□ 2.45
SEC13-217ENST00000482647 NKTRP30414 1462 aaKnown RBP30.36■■■□□ 2.45
SEC13-217ENST00000482647 NWD1Q149M9 1564 aa30.35■■■□□ 2.45
SEC13-217ENST00000482647 TMEM94Q12767 1356 aa30.34■■■□□ 2.45
SEC13-217ENST00000482647 UBAP1LF5GYI3 381 aa30.34■■■□□ 2.45
SEC13-217ENST00000482647 KDM2AQ9Y2K7 1162 aa30.34■■■□□ 2.45
SEC13-217ENST00000482647 PTPRUQ92729 1446 aa30.33■■■□□ 2.45
SEC13-217ENST00000482647 MYOM2P54296 1465 aa30.32■■■□□ 2.44
SEC13-217ENST00000482647 SIN3AQ96ST3 1273 aa30.32■■■□□ 2.44
SEC13-217ENST00000482647 ALKQ9UM73 1620 aa30.32■■■□□ 2.44
SEC13-217ENST00000482647 PIK3C2GO75747 1445 aa30.31■■■□□ 2.44
SEC13-217ENST00000482647 CHD2O14647 1828 aaKnown RBP30.31■■■□□ 2.44
SEC13-217ENST00000482647 IFT172Q9UG01 1749 aa30.31■■■□□ 2.44
SEC13-217ENST00000482647 RBM33Q96EV2 1170 aaKnown RBP30.31■■■□□ 2.44
SEC13-217ENST00000482647 TOM1O60784 492 aa30.3■■■□□ 2.44
SEC13-217ENST00000482647 NEUROD1Q13562 356 aa30.29■■■□□ 2.44
SEC13-217ENST00000482647 C14orf93Q9H972 538 aaKnown RBP30.29■■■□□ 2.44
SEC13-217ENST00000482647 NRXN1Q9ULB1 1477 aa30.29■■■□□ 2.44
SEC13-217ENST00000482647 NCOA3Q9Y6Q9 1424 aa30.24■■■□□ 2.43
SEC13-217ENST00000482647 CFAP70Q5T0N1 1121 aa30.24■■■□□ 2.43
SEC13-217ENST00000482647 C14orf37Q86TY3 774 aa30.24■■■□□ 2.43
SEC13-217ENST00000482647 TMEM132EQ6IEE7 984 aa30.22■■■□□ 2.43
SEC13-217ENST00000482647 MSH6P52701 1360 aa30.19■■■□□ 2.42
SEC13-217ENST00000482647 L3MBTL2Q969R5 705 aa30.19■■■□□ 2.42
SEC13-217ENST00000482647 SETD1AO15047 1707 aaKnown RBP30.19■■■□□ 2.42
SEC13-217ENST00000482647 XRN1Q8IZH2 1706 aaKnown RBP30.19■■■□□ 2.42
SEC13-217ENST00000482647 STK26Q9P289 416 aa30.18■■■□□ 2.42
SEC13-217ENST00000482647 PIP4K2BP78356 416 aa30.17■■■□□ 2.42
SEC13-217ENST00000482647 C19orf44Q9H6X5 657 aa30.17■■■□□ 2.42
SEC13-217ENST00000482647 LRPPRCP42704 1394 aaKnown RBP30.16■■■□□ 2.42
SEC13-217ENST00000482647 SCAF1Q9H7N4 1312 aaKnown RBP30.15■■■□□ 2.42
SEC13-217ENST00000482647 ROBO2Q9HCK4 1378 aa30.15■■■□□ 2.42
SEC13-217ENST00000482647 PTCH1Q13635 1447 aa30.14■■■□□ 2.42
SEC13-217ENST00000482647 PRAG1Q86YV5 1406 aa30.14■■■□□ 2.42
SEC13-217ENST00000482647 XIRP1Q702N8 1843 aaKnown RBP30.14■■■□□ 2.42
SEC13-217ENST00000482647 ABCC11Q96J66 1382 aa30.14■■■□□ 2.41
SEC13-217ENST00000482647 YTHDC2Q9H6S0 1430 aaKnown RBP30.12■■■□□ 2.41
SEC13-217ENST00000482647 ATF3P18847 181 aa30.11■■■□□ 2.41
SEC13-217ENST00000482647 LAMC1P11047 1609 aa30.11■■■□□ 2.41
SEC13-217ENST00000482647 CADPS2Q86UW7 1296 aa30.09■■■□□ 2.41
SEC13-217ENST00000482647 ASXL1Q8IXJ9 1541 aa30.08■■■□□ 2.41
SEC13-217ENST00000482647 TECPR2O15040 1411 aa30.08■■■□□ 2.41
SEC13-217ENST00000482647 SIRT1Q96EB6 747 aa30.08■■■□□ 2.41
SEC13-217ENST00000482647 SLAIN2Q9P270 581 aa30.07■■■□□ 2.4
SEC13-217ENST00000482647 TONSLQ96HA7 1378 aa30.06■■■□□ 2.4
SEC13-217ENST00000482647 CLSPNQ9HAW4 1339 aa30.04■■■□□ 2.4
SEC13-217ENST00000482647 WAPLQ7Z5K2 1190 aa30.04■■■□□ 2.4
SEC13-217ENST00000482647 ADGRL3Q9HAR2 1447 aa30.03■■■□□ 2.4
SEC13-217ENST00000482647 ADGRB1O14514 1584 aa30.02■■■□□ 2.4
SEC13-217ENST00000482647 DCCP43146 1447 aa30.01■■■□□ 2.39
SEC13-217ENST00000482647 FAM135BQ49AJ0 1406 aa30■■■□□ 2.39
SEC13-217ENST00000482647 CCER1Q8TC90 406 aaPredicted RBP30■■■□□ 2.39
SEC13-217ENST00000482647 TRAK1Q9UPV9 953 aa30■■■□□ 2.39
SEC13-217ENST00000482647 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.97■■■□□ 2.39
SEC13-217ENST00000482647 NBPF1Q3BBV0 1214 aa29.97■■■□□ 2.39
SEC13-217ENST00000482647 PRAM1Q96QH2 718 aa29.97■■■□□ 2.39
SEC13-217ENST00000482647 POGKQ9P215 609 aa29.97■■■□□ 2.39
SEC13-217ENST00000482647 PLEKHH1Q9ULM0 1364 aa29.96■■■□□ 2.39
SEC13-217ENST00000482647 KNDC1Q76NI1 1749 aa29.95■■■□□ 2.38
SEC13-217ENST00000482647 HSPA1LP34931 641 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms