RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 PLEKHG1Q9ULL1 1385 aa17.8■□□□□ 0.44
HMGN1-213ENST00000482192 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.8■□□□□ 0.44
HMGN1-213ENST00000482192 STRCP1A6NGW2 1772 aa17.8■□□□□ 0.44
HMGN1-213ENST00000482192 LRRC7Q96NW7 1537 aa17.79■□□□□ 0.44
HMGN1-213ENST00000482192 BCANQ96GW7 911 aa17.79■□□□□ 0.44
HMGN1-213ENST00000482192 SLC26A8Q96RN1 970 aa17.79■□□□□ 0.44
HMGN1-213ENST00000482192 SLC4A1APQ9BWU0 796 aaKnown RBP17.79■□□□□ 0.44
HMGN1-213ENST00000482192 CLTCL1P53675 1640 aa17.76■□□□□ 0.43
HMGN1-213ENST00000482192 ACIN1Q9UKV3 1341 aaKnown RBP17.76■□□□□ 0.43
HMGN1-213ENST00000482192 TOM1O60784 492 aa17.75■□□□□ 0.43
HMGN1-213ENST00000482192 KCNA6P17658 529 aa17.74■□□□□ 0.43
HMGN1-213ENST00000482192 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
HMGN1-213ENST00000482192 NUTM2DQ5VT03 806 aaPredicted RBP17.73■□□□□ 0.43
HMGN1-213ENST00000482192 NWD1Q149M9 1564 aa17.73■□□□□ 0.43
HMGN1-213ENST00000482192 DIP2AQ14689 1571 aa17.72■□□□□ 0.43
HMGN1-213ENST00000482192 NKTRP30414 1462 aaKnown RBP17.72■□□□□ 0.43
HMGN1-213ENST00000482192 ZNF326Q5BKZ1 582 aaKnown RBP17.72■□□□□ 0.43
HMGN1-213ENST00000482192 SENP3Q9H4L4 574 aaPredicted RBP17.72■□□□□ 0.43
HMGN1-213ENST00000482192 TBX22Q9Y458 520 aa17.71■□□□□ 0.43
HMGN1-213ENST00000482192 ADAMTS13Q76LX8 1427 aa17.71■□□□□ 0.43
HMGN1-213ENST00000482192 MPHOSPH9Q99550 1183 aa17.7■□□□□ 0.42
HMGN1-213ENST00000482192 KIF1BO60333 1816 aa17.69■□□□□ 0.42
HMGN1-213ENST00000482192 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
HMGN1-213ENST00000482192 TMEM94Q12767 1356 aa17.68■□□□□ 0.42
HMGN1-213ENST00000482192 NEXMIFQ5QGS0 1516 aa17.68■□□□□ 0.42
HMGN1-213ENST00000482192 PIP4K2BP78356 416 aa17.68■□□□□ 0.42
HMGN1-213ENST00000482192 ALKQ9UM73 1620 aa17.68■□□□□ 0.42
HMGN1-213ENST00000482192 PIK3R4Q99570 1358 aa17.67■□□□□ 0.42
HMGN1-213ENST00000482192 RAB3GAP2Q9H2M9 1393 aa17.67■□□□□ 0.42
HMGN1-213ENST00000482192 SETBP1Q9Y6X0 1596 aa17.67■□□□□ 0.42
HMGN1-213ENST00000482192 FOXD1Q16676 465 aa17.67■□□□□ 0.42
HMGN1-213ENST00000482192 PROSER2Q86WR7 435 aaPredicted RBP17.67■□□□□ 0.42
HMGN1-213ENST00000482192 CCDC144AA2RUR9 1427 aa17.66■□□□□ 0.42
HMGN1-213ENST00000482192 XIRP1Q702N8 1843 aaKnown RBP17.65■□□□□ 0.42
HMGN1-213ENST00000482192 CHD2O14647 1828 aaKnown RBP17.65■□□□□ 0.42
HMGN1-213ENST00000482192 NRXN3Q9Y4C0 1643 aa17.65■□□□□ 0.42
HMGN1-213ENST00000482192 RPGRIP1LQ68CZ1 1315 aa17.63■□□□□ 0.41
HMGN1-213ENST00000482192 VGFO15240 615 aaPredicted RBP17.61■□□□□ 0.41
HMGN1-213ENST00000482192 RBM33Q96EV2 1170 aaKnown RBP17.61■□□□□ 0.41
HMGN1-213ENST00000482192 MSH6P52701 1360 aa17.6■□□□□ 0.41
HMGN1-213ENST00000482192 NCOA3Q9Y6Q9 1424 aa17.59■□□□□ 0.41
HMGN1-213ENST00000482192 HSPA1LP34931 641 aa17.59■□□□□ 0.41
HMGN1-213ENST00000482192 SPATA31E1Q6ZUB1 1445 aa17.58■□□□□ 0.41
HMGN1-213ENST00000482192 PTPRUQ92729 1446 aa17.58■□□□□ 0.41
HMGN1-213ENST00000482192 AMOTL2Q9Y2J4 779 aa17.58■□□□□ 0.4
HMGN1-213ENST00000482192 METP08581 1390 aa17.57■□□□□ 0.4
HMGN1-213ENST00000482192 HRCP23327 699 aa17.57■□□□□ 0.4
HMGN1-213ENST00000482192 XRN1Q8IZH2 1706 aaKnown RBP17.57■□□□□ 0.4
HMGN1-213ENST00000482192 PPLO60437 1756 aa17.56■□□□□ 0.4
HMGN1-213ENST00000482192 C14orf37Q86TY3 774 aa17.55■□□□□ 0.4
HMGN1-213ENST00000482192 FAM135BQ49AJ0 1406 aa17.54■□□□□ 0.4
HMGN1-213ENST00000482192 ANKRD30BQ9BXX2 1392 aa17.53■□□□□ 0.4
HMGN1-213ENST00000482192 RGL3Q3MIN7 710 aa17.53■□□□□ 0.4
HMGN1-213ENST00000482192 SETD1AO15047 1707 aaKnown RBP17.51■□□□□ 0.39
HMGN1-213ENST00000482192 C19orf44Q9H6X5 657 aa17.51■□□□□ 0.39
HMGN1-213ENST00000482192 IFT172Q9UG01 1749 aa17.5■□□□□ 0.39
HMGN1-213ENST00000482192 SLAIN2Q9P270 581 aa17.5■□□□□ 0.39
HMGN1-213ENST00000482192 DISP3Q9P2K9 1392 aa17.5■□□□□ 0.39
HMGN1-213ENST00000482192 ROBO1Q9Y6N7 1651 aa17.49■□□□□ 0.39
HMGN1-213ENST00000482192 CADPS2Q86UW7 1296 aa17.49■□□□□ 0.39
HMGN1-213ENST00000482192 ADGRF5Q8IZF2 1346 aa17.48■□□□□ 0.39
HMGN1-213ENST00000482192 DCCP43146 1447 aa17.48■□□□□ 0.39
HMGN1-213ENST00000482192 PTCH1Q13635 1447 aa17.48■□□□□ 0.39
HMGN1-213ENST00000482192 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.48■□□□□ 0.39
HMGN1-213ENST00000482192 ATF3P18847 181 aa17.48■□□□□ 0.39
HMGN1-213ENST00000482192 PRAG1Q86YV5 1406 aa17.47■□□□□ 0.39
HMGN1-213ENST00000482192 PIK3C2GO75747 1445 aa17.47■□□□□ 0.39
HMGN1-213ENST00000482192 MYOM2P54296 1465 aa17.45■□□□□ 0.38
HMGN1-213ENST00000482192 ADGRL3Q9HAR2 1447 aa17.45■□□□□ 0.38
HMGN1-213ENST00000482192 ROBO2Q9HCK4 1378 aa17.43■□□□□ 0.38
HMGN1-213ENST00000482192 NRXN1Q9ULB1 1477 aa17.43■□□□□ 0.38
HMGN1-213ENST00000482192 MED1Q15648 1581 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-213ENST00000482192 NALCNQ8IZF0 1738 aa17.41■□□□□ 0.38
HMGN1-213ENST00000482192 LAMC1P11047 1609 aa17.39■□□□□ 0.38
HMGN1-213ENST00000482192 TECPR2O15040 1411 aa17.39■□□□□ 0.38
HMGN1-213ENST00000482192 MST1RQ04912 1400 aa17.39■□□□□ 0.38
HMGN1-213ENST00000482192 ASXL1Q8IXJ9 1541 aa17.39■□□□□ 0.37
HMGN1-213ENST00000482192 LRPPRCP42704 1394 aaKnown RBP17.39■□□□□ 0.37
HMGN1-213ENST00000482192 C14orf93Q9H972 538 aaKnown RBP17.38■□□□□ 0.37
HMGN1-213ENST00000482192 PHLPP1O60346 1717 aa17.38■□□□□ 0.37
HMGN1-213ENST00000482192 ABCC11Q96J66 1382 aa17.37■□□□□ 0.37
HMGN1-213ENST00000482192 AHDC1Q5TGY3 1603 aaPredicted RBP17.36■□□□□ 0.37
HMGN1-213ENST00000482192 TMEM132EQ6IEE7 984 aa17.36■□□□□ 0.37
HMGN1-213ENST00000482192 BRINP3Q76B58 766 aa17.36■□□□□ 0.37
HMGN1-213ENST00000482192 STK26Q9P289 416 aa17.36■□□□□ 0.37
HMGN1-213ENST00000482192 YTHDC2Q9H6S0 1430 aaKnown RBP17.36■□□□□ 0.37
HMGN1-213ENST00000482192 KNDC1Q76NI1 1749 aa17.35■□□□□ 0.37
HMGN1-213ENST00000482192 STAC3Q96MF2 364 aa17.35■□□□□ 0.37
HMGN1-213ENST00000482192 PHF23Q9BUL5 403 aaPredicted RBP17.35■□□□□ 0.37
HMGN1-213ENST00000482192 COL16A1Q07092 1604 aaPredicted RBP17.35■□□□□ 0.37
HMGN1-213ENST00000482192 CFAP70Q5T0N1 1121 aa17.34■□□□□ 0.37
HMGN1-213ENST00000482192 DCAF11Q8TEB1 546 aa17.34■□□□□ 0.37
HMGN1-213ENST00000482192 DHX57Q6P158 1386 aaKnown RBP17.33■□□□□ 0.36
HMGN1-213ENST00000482192 JCADQ9P266 1359 aa17.33■□□□□ 0.36
HMGN1-213ENST00000482192 CDC42BPGQ6DT37 1551 aa17.32■□□□□ 0.36
HMGN1-213ENST00000482192 C1orf167Q5SNV9 1468 aa17.31■□□□□ 0.36
HMGN1-213ENST00000482192 KDM2AQ9Y2K7 1162 aa17.31■□□□□ 0.36
HMGN1-213ENST00000482192 WAPLQ7Z5K2 1190 aa17.3■□□□□ 0.36
HMGN1-213ENST00000482192 SIRT1Q96EB6 747 aa17.3■□□□□ 0.36
HMGN1-213ENST00000482192 PLEKHH1Q9ULM0 1364 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms