RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 FOXD1Q16676 465 aa24.09■■□□□ 1.45
CCDC78-212ENST00000482152 ZNF335Q9H4Z2 1342 aaPredicted RBP24.08■■□□□ 1.44
CCDC78-212ENST00000482152 ZNF326Q5BKZ1 582 aaKnown RBP24.07■■□□□ 1.44
CCDC78-212ENST00000482152 CCDC144AA2RUR9 1427 aa24.07■■□□□ 1.44
CCDC78-212ENST00000482152 CLTCL1P53675 1640 aa24.06■■□□□ 1.44
CCDC78-212ENST00000482152 PLEKHG1Q9ULL1 1385 aa24.06■■□□□ 1.44
CCDC78-212ENST00000482152 RPGRIP1LQ68CZ1 1315 aa24.06■■□□□ 1.44
CCDC78-212ENST00000482152 LTBP4Q8N2S1 1624 aa24.04■■□□□ 1.44
CCDC78-212ENST00000482152 BCANQ96GW7 911 aa24.03■■□□□ 1.44
CCDC78-212ENST00000482152 MYO5BQ9ULV0 1848 aa24.02■■□□□ 1.44
CCDC78-212ENST00000482152 TBX22Q9Y458 520 aa24.01■■□□□ 1.43
CCDC78-212ENST00000482152 KIF1BO60333 1816 aa24■■□□□ 1.43
CCDC78-212ENST00000482152 IQSEC2Q5JU85 1478 aa24■■□□□ 1.43
CCDC78-212ENST00000482152 VGFO15240 615 aaPredicted RBP24■■□□□ 1.43
CCDC78-212ENST00000482152 CPS1P31327 1500 aa24■■□□□ 1.43
CCDC78-212ENST00000482152 FBXO41Q8TF61 875 aa23.98■■□□□ 1.43
CCDC78-212ENST00000482152 SLC26A8Q96RN1 970 aa23.98■■□□□ 1.43
CCDC78-212ENST00000482152 ANKRD30BQ9BXX2 1392 aa23.97■■□□□ 1.43
CCDC78-212ENST00000482152 NUTM2DQ5VT03 806 aaPredicted RBP23.96■■□□□ 1.43
CCDC78-212ENST00000482152 KCNA6P17658 529 aa23.95■■□□□ 1.42
CCDC78-212ENST00000482152 SPATA31E1Q6ZUB1 1445 aa23.93■■□□□ 1.42
CCDC78-212ENST00000482152 PIK3R4Q99570 1358 aa23.92■■□□□ 1.42
CCDC78-212ENST00000482152 NEXMIFQ5QGS0 1516 aa23.92■■□□□ 1.42
CCDC78-212ENST00000482152 DIP2AQ14689 1571 aa23.91■■□□□ 1.42
CCDC78-212ENST00000482152 RGL3Q3MIN7 710 aa23.9■■□□□ 1.42
CCDC78-212ENST00000482152 ADAMTS13Q76LX8 1427 aa23.9■■□□□ 1.42
CCDC78-212ENST00000482152 SETBP1Q9Y6X0 1596 aa23.88■■□□□ 1.41
CCDC78-212ENST00000482152 STAC3Q96MF2 364 aa23.87■■□□□ 1.41
CCDC78-212ENST00000482152 ILDR1Q86SU0 546 aaPredicted RBP23.84■■□□□ 1.41
CCDC78-212ENST00000482152 LRRC7Q96NW7 1537 aa23.84■■□□□ 1.41
CCDC78-212ENST00000482152 SENP3Q9H4L4 574 aaPredicted RBP23.83■■□□□ 1.41
CCDC78-212ENST00000482152 NKTRP30414 1462 aaKnown RBP23.82■■□□□ 1.4
CCDC78-212ENST00000482152 PROSER2Q86WR7 435 aaPredicted RBP23.82■■□□□ 1.4
CCDC78-212ENST00000482152 STRCP1A6NGW2 1772 aa23.8■■□□□ 1.4
CCDC78-212ENST00000482152 PPLO60437 1756 aa23.8■■□□□ 1.4
CCDC78-212ENST00000482152 TOM1O60784 492 aa23.8■■□□□ 1.4
CCDC78-212ENST00000482152 NWD1Q149M9 1564 aa23.8■■□□□ 1.4
CCDC78-212ENST00000482152 AMOTL2Q9Y2J4 779 aa23.79■■□□□ 1.4
CCDC78-212ENST00000482152 NCOA3Q9Y6Q9 1424 aa23.78■■□□□ 1.4
CCDC78-212ENST00000482152 CHD2O14647 1828 aaKnown RBP23.78■■□□□ 1.4
CCDC78-212ENST00000482152 ADGRF5Q8IZF2 1346 aa23.78■■□□□ 1.4
CCDC78-212ENST00000482152 NRXN3Q9Y4C0 1643 aa23.77■■□□□ 1.4
CCDC78-212ENST00000482152 UBAP1LF5GYI3 381 aa23.77■■□□□ 1.4
CCDC78-212ENST00000482152 METP08581 1390 aa23.76■■□□□ 1.39
CCDC78-212ENST00000482152 TMEM94Q12767 1356 aa23.75■■□□□ 1.39
CCDC78-212ENST00000482152 MYOM2P54296 1465 aa23.74■■□□□ 1.39
CCDC78-212ENST00000482152 ALKQ9UM73 1620 aa23.73■■□□□ 1.39
CCDC78-212ENST00000482152 IFT172Q9UG01 1749 aa23.73■■□□□ 1.39
CCDC78-212ENST00000482152 DHX57Q6P158 1386 aaKnown RBP23.72■■□□□ 1.39
CCDC78-212ENST00000482152 PTPRUQ92729 1446 aa23.72■■□□□ 1.39
CCDC78-212ENST00000482152 PIK3C2GO75747 1445 aa23.71■■□□□ 1.39
CCDC78-212ENST00000482152 DCAF11Q8TEB1 546 aa23.71■■□□□ 1.39
CCDC78-212ENST00000482152 NRXN1Q9ULB1 1477 aa23.7■■□□□ 1.38
CCDC78-212ENST00000482152 C14orf93Q9H972 538 aaKnown RBP23.7■■□□□ 1.38
CCDC78-212ENST00000482152 MSH6P52701 1360 aa23.67■■□□□ 1.38
CCDC78-212ENST00000482152 C19orf44Q9H6X5 657 aa23.66■■□□□ 1.38
CCDC78-212ENST00000482152 KDM2AQ9Y2K7 1162 aa23.66■■□□□ 1.38
CCDC78-212ENST00000482152 PRAG1Q86YV5 1406 aa23.66■■□□□ 1.38
CCDC78-212ENST00000482152 PCGF6Q9BYE7 350 aa23.65■■□□□ 1.38
CCDC78-212ENST00000482152 XRN1Q8IZH2 1706 aaKnown RBP23.64■■□□□ 1.38
CCDC78-212ENST00000482152 C14orf37Q86TY3 774 aa23.64■■□□□ 1.37
CCDC78-212ENST00000482152 RBM33Q96EV2 1170 aaKnown RBP23.64■■□□□ 1.37
CCDC78-212ENST00000482152 SETD1AO15047 1707 aaKnown RBP23.63■■□□□ 1.37
CCDC78-212ENST00000482152 PTCH1Q13635 1447 aa23.62■■□□□ 1.37
CCDC78-212ENST00000482152 XIRP1Q702N8 1843 aaKnown RBP23.62■■□□□ 1.37
CCDC78-212ENST00000482152 CFAP70Q5T0N1 1121 aa23.62■■□□□ 1.37
CCDC78-212ENST00000482152 CADPS2Q86UW7 1296 aa23.61■■□□□ 1.37
CCDC78-212ENST00000482152 SIRT1Q96EB6 747 aa23.61■■□□□ 1.37
CCDC78-212ENST00000482152 LRPPRCP42704 1394 aaKnown RBP23.61■■□□□ 1.37
CCDC78-212ENST00000482152 ABCC11Q96J66 1382 aa23.61■■□□□ 1.37
CCDC78-212ENST00000482152 LAMC1P11047 1609 aa23.6■■□□□ 1.37
CCDC78-212ENST00000482152 PIP4K2BP78356 416 aa23.6■■□□□ 1.37
CCDC78-212ENST00000482152 SIN3AQ96ST3 1273 aa23.6■■□□□ 1.37
CCDC78-212ENST00000482152 ATF3P18847 181 aa23.59■■□□□ 1.37
CCDC78-212ENST00000482152 NEUROD1Q13562 356 aa23.58■■□□□ 1.37
CCDC78-212ENST00000482152 TMEM132EQ6IEE7 984 aa23.58■■□□□ 1.37
CCDC78-212ENST00000482152 SCAF1Q9H7N4 1312 aaKnown RBP23.58■■□□□ 1.36
CCDC78-212ENST00000482152 SLAIN2Q9P270 581 aa23.57■■□□□ 1.36
CCDC78-212ENST00000482152 TECPR2O15040 1411 aa23.57■■□□□ 1.36
CCDC78-212ENST00000482152 DCCP43146 1447 aa23.57■■□□□ 1.36
CCDC78-212ENST00000482152 ROBO2Q9HCK4 1378 aa23.56■■□□□ 1.36
CCDC78-212ENST00000482152 YTHDC2Q9H6S0 1430 aaKnown RBP23.56■■□□□ 1.36
CCDC78-212ENST00000482152 L3MBTL2Q969R5 705 aa23.55■■□□□ 1.36
CCDC78-212ENST00000482152 STK26Q9P289 416 aa23.55■■□□□ 1.36
CCDC78-212ENST00000482152 FAM135BQ49AJ0 1406 aa23.55■■□□□ 1.36
CCDC78-212ENST00000482152 ADGRL3Q9HAR2 1447 aa23.52■■□□□ 1.36
CCDC78-212ENST00000482152 CLSPNQ9HAW4 1339 aa23.52■■□□□ 1.36
CCDC78-212ENST00000482152 ASXL1Q8IXJ9 1541 aa23.5■■□□□ 1.35
CCDC78-212ENST00000482152 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.49■■□□□ 1.35
CCDC78-212ENST00000482152 ADGRB1O14514 1584 aa23.47■■□□□ 1.35
CCDC78-212ENST00000482152 KNDC1Q76NI1 1749 aa23.47■■□□□ 1.35
CCDC78-212ENST00000482152 WAPLQ7Z5K2 1190 aa23.46■■□□□ 1.35
CCDC78-212ENST00000482152 DLC1Q96QB1 1528 aa23.45■■□□□ 1.34
CCDC78-212ENST00000482152 TONSLQ96HA7 1378 aa23.44■■□□□ 1.34
CCDC78-212ENST00000482152 HSPA1LP34931 641 aa23.44■■□□□ 1.34
CCDC78-212ENST00000482152 KIAA1210Q9ULL0 1709 aa23.44■■□□□ 1.34
CCDC78-212ENST00000482152 POGKQ9P215 609 aa23.43■■□□□ 1.34
CCDC78-212ENST00000482152 PRAM1Q96QH2 718 aa23.42■■□□□ 1.34
CCDC78-212ENST00000482152 TRAK1Q9UPV9 953 aa23.42■■□□□ 1.34
CCDC78-212ENST00000482152 TIMELESSQ9UNS1 1208 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms