RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 ZFYVE9O95405 1425 aa22.14■■□□□ 1.14
OPTN-210ENST00000482140 UBAP1LF5GYI3 381 aa22.14■■□□□ 1.13
OPTN-210ENST00000482140 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.14■■□□□ 1.13
OPTN-210ENST00000482140 TRPM2O94759 1503 aa22.12■■□□□ 1.13
OPTN-210ENST00000482140 SLC26A8Q96RN1 970 aa22.11■■□□□ 1.13
OPTN-210ENST00000482140 SENP3Q9H4L4 574 aaPredicted RBP22.11■■□□□ 1.13
OPTN-210ENST00000482140 PLEKHG1Q9ULL1 1385 aa22.11■■□□□ 1.13
OPTN-210ENST00000482140 CLTCL1P53675 1640 aa22.1■■□□□ 1.13
OPTN-210ENST00000482140 KIF1BO60333 1816 aa22.1■■□□□ 1.13
OPTN-210ENST00000482140 SETD5Q9C0A6 1442 aa22.09■■□□□ 1.13
OPTN-210ENST00000482140 LRRC7Q96NW7 1537 aa22.08■■□□□ 1.13
OPTN-210ENST00000482140 ZNF326Q5BKZ1 582 aaKnown RBP22.08■■□□□ 1.13
OPTN-210ENST00000482140 NUTM2DQ5VT03 806 aaPredicted RBP22.08■■□□□ 1.13
OPTN-210ENST00000482140 ACIN1Q9UKV3 1341 aaKnown RBP22.07■■□□□ 1.12
OPTN-210ENST00000482140 TOM1O60784 492 aa22.06■■□□□ 1.12
OPTN-210ENST00000482140 KCNA6P17658 529 aa22.04■■□□□ 1.12
OPTN-210ENST00000482140 SCAF1Q9H7N4 1312 aaKnown RBP22.04■■□□□ 1.12
OPTN-210ENST00000482140 MPHOSPH9Q99550 1183 aa22.02■■□□□ 1.12
OPTN-210ENST00000482140 DIP2AQ14689 1571 aa22.01■■□□□ 1.11
OPTN-210ENST00000482140 FOXD1Q16676 465 aa22.01■■□□□ 1.11
OPTN-210ENST00000482140 NWD1Q149M9 1564 aa22■■□□□ 1.11
OPTN-210ENST00000482140 PIP4K2BP78356 416 aa22■■□□□ 1.11
OPTN-210ENST00000482140 TBX22Q9Y458 520 aa22■■□□□ 1.11
OPTN-210ENST00000482140 CHD2O14647 1828 aaKnown RBP22■■□□□ 1.11
OPTN-210ENST00000482140 RAB3GAP2Q9H2M9 1393 aa21.99■■□□□ 1.11
OPTN-210ENST00000482140 NKTRP30414 1462 aaKnown RBP21.99■■□□□ 1.11
OPTN-210ENST00000482140 XIRP1Q702N8 1843 aaKnown RBP21.99■■□□□ 1.11
OPTN-210ENST00000482140 PROSER2Q86WR7 435 aaPredicted RBP21.98■■□□□ 1.11
OPTN-210ENST00000482140 ADAMTS13Q76LX8 1427 aa21.97■■□□□ 1.11
OPTN-210ENST00000482140 NEXMIFQ5QGS0 1516 aa21.97■■□□□ 1.11
OPTN-210ENST00000482140 CCDC144AA2RUR9 1427 aa21.97■■□□□ 1.11
OPTN-210ENST00000482140 TMEM94Q12767 1356 aa21.96■■□□□ 1.11
OPTN-210ENST00000482140 PIK3R4Q99570 1358 aa21.93■■□□□ 1.1
OPTN-210ENST00000482140 SETBP1Q9Y6X0 1596 aa21.93■■□□□ 1.1
OPTN-210ENST00000482140 NRXN3Q9Y4C0 1643 aa21.92■■□□□ 1.1
OPTN-210ENST00000482140 RPGRIP1LQ68CZ1 1315 aa21.91■■□□□ 1.1
OPTN-210ENST00000482140 RBM33Q96EV2 1170 aaKnown RBP21.91■■□□□ 1.1
OPTN-210ENST00000482140 ALKQ9UM73 1620 aa21.91■■□□□ 1.1
OPTN-210ENST00000482140 VGFO15240 615 aaPredicted RBP21.9■■□□□ 1.1
OPTN-210ENST00000482140 PPLO60437 1756 aa21.89■■□□□ 1.09
OPTN-210ENST00000482140 MSH6P52701 1360 aa21.87■■□□□ 1.09
OPTN-210ENST00000482140 AMOTL2Q9Y2J4 779 aa21.86■■□□□ 1.09
OPTN-210ENST00000482140 HRCP23327 699 aa21.85■■□□□ 1.09
OPTN-210ENST00000482140 HSPA1LP34931 641 aa21.85■■□□□ 1.09
OPTN-210ENST00000482140 RGL3Q3MIN7 710 aa21.85■■□□□ 1.09
OPTN-210ENST00000482140 C14orf37Q86TY3 774 aa21.85■■□□□ 1.09
OPTN-210ENST00000482140 PTPRUQ92729 1446 aa21.84■■□□□ 1.09
OPTN-210ENST00000482140 SPATA31E1Q6ZUB1 1445 aa21.82■■□□□ 1.08
OPTN-210ENST00000482140 NCOA3Q9Y6Q9 1424 aa21.82■■□□□ 1.08
OPTN-210ENST00000482140 XRN1Q8IZH2 1706 aaKnown RBP21.82■■□□□ 1.08
OPTN-210ENST00000482140 METP08581 1390 aa21.82■■□□□ 1.08
OPTN-210ENST00000482140 IFT172Q9UG01 1749 aa21.8■■□□□ 1.08
OPTN-210ENST00000482140 ANKRD30BQ9BXX2 1392 aa21.79■■□□□ 1.08
OPTN-210ENST00000482140 SETD1AO15047 1707 aaKnown RBP21.77■■□□□ 1.08
OPTN-210ENST00000482140 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.76■■□□□ 1.07
OPTN-210ENST00000482140 FAM135BQ49AJ0 1406 aa21.75■■□□□ 1.07
OPTN-210ENST00000482140 C19orf44Q9H6X5 657 aa21.75■■□□□ 1.07
OPTN-210ENST00000482140 ROBO1Q9Y6N7 1651 aa21.75■■□□□ 1.07
OPTN-210ENST00000482140 ADGRF5Q8IZF2 1346 aa21.75■■□□□ 1.07
OPTN-210ENST00000482140 ATF3P18847 181 aa21.74■■□□□ 1.07
OPTN-210ENST00000482140 SLAIN2Q9P270 581 aa21.74■■□□□ 1.07
OPTN-210ENST00000482140 DISP3Q9P2K9 1392 aa21.74■■□□□ 1.07
OPTN-210ENST00000482140 CADPS2Q86UW7 1296 aa21.73■■□□□ 1.07
OPTN-210ENST00000482140 DCCP43146 1447 aa21.69■■□□□ 1.06
OPTN-210ENST00000482140 PTCH1Q13635 1447 aa21.69■■□□□ 1.06
OPTN-210ENST00000482140 PIK3C2GO75747 1445 aa21.68■■□□□ 1.06
OPTN-210ENST00000482140 NALCNQ8IZF0 1738 aa21.66■■□□□ 1.06
OPTN-210ENST00000482140 MYOM2P54296 1465 aa21.66■■□□□ 1.06
OPTN-210ENST00000482140 ADGRL3Q9HAR2 1447 aa21.66■■□□□ 1.06
OPTN-210ENST00000482140 ROBO2Q9HCK4 1378 aa21.65■■□□□ 1.06
OPTN-210ENST00000482140 PRAG1Q86YV5 1406 aa21.64■■□□□ 1.06
OPTN-210ENST00000482140 PHLPP1O60346 1717 aa21.64■■□□□ 1.06
OPTN-210ENST00000482140 LAMC1P11047 1609 aa21.63■■□□□ 1.05
OPTN-210ENST00000482140 STK26Q9P289 416 aa21.63■■□□□ 1.05
OPTN-210ENST00000482140 MED1Q15648 1581 aaPredicted RBP21.62■■□□□ 1.05
OPTN-210ENST00000482140 NRXN1Q9ULB1 1477 aa21.62■■□□□ 1.05
OPTN-210ENST00000482140 TMEM132EQ6IEE7 984 aa21.61■■□□□ 1.05
OPTN-210ENST00000482140 LRPPRCP42704 1394 aaKnown RBP21.61■■□□□ 1.05
OPTN-210ENST00000482140 ASXL1Q8IXJ9 1541 aa21.6■■□□□ 1.05
OPTN-210ENST00000482140 DCAF11Q8TEB1 546 aa21.6■■□□□ 1.05
OPTN-210ENST00000482140 KDM2AQ9Y2K7 1162 aa21.6■■□□□ 1.05
OPTN-210ENST00000482140 KNDC1Q76NI1 1749 aa21.6■■□□□ 1.05
OPTN-210ENST00000482140 MST1RQ04912 1400 aa21.59■■□□□ 1.05
OPTN-210ENST00000482140 C14orf93Q9H972 538 aaKnown RBP21.59■■□□□ 1.05
OPTN-210ENST00000482140 CFAP70Q5T0N1 1121 aa21.58■■□□□ 1.05
OPTN-210ENST00000482140 TECPR2O15040 1411 aa21.57■■□□□ 1.04
OPTN-210ENST00000482140 YTHDC2Q9H6S0 1430 aaKnown RBP21.57■■□□□ 1.04
OPTN-210ENST00000482140 DHX57Q6P158 1386 aaKnown RBP21.57■■□□□ 1.04
OPTN-210ENST00000482140 ABCC11Q96J66 1382 aa21.57■■□□□ 1.04
OPTN-210ENST00000482140 BRINP3Q76B58 766 aa21.56■■□□□ 1.04
OPTN-210ENST00000482140 STAC3Q96MF2 364 aa21.56■■□□□ 1.04
OPTN-210ENST00000482140 AHDC1Q5TGY3 1603 aaPredicted RBP21.55■■□□□ 1.04
OPTN-210ENST00000482140 PHF23Q9BUL5 403 aaPredicted RBP21.54■■□□□ 1.04
OPTN-210ENST00000482140 COL16A1Q07092 1604 aaPredicted RBP21.54■■□□□ 1.04
OPTN-210ENST00000482140 WAPLQ7Z5K2 1190 aa21.53■■□□□ 1.04
OPTN-210ENST00000482140 TRIM26Q12899 539 aaPredicted RBP21.52■■□□□ 1.04
OPTN-210ENST00000482140 JCADQ9P266 1359 aa21.51■■□□□ 1.03
OPTN-210ENST00000482140 CDC42BPGQ6DT37 1551 aa21.51■■□□□ 1.03
OPTN-210ENST00000482140 C1orf167Q5SNV9 1468 aa21.51■■□□□ 1.03
OPTN-210ENST00000482140 NHSL1Q5SYE7 1610 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms