RNA–Protein interactions for RNA: ENST00000481738.1

LINC00544-202, long intergenic non-protein coding RNA 544, humanhuman

TSL 3 BASIC

Gene LINC00544, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-202ENST00000481738 PPP1R15AO75807 674 aaPredicted RBP13.49□□□□□ -0.25
LINC00544-202ENST00000481738 HDGFP51858 240 aaKnown RBP13.49□□□□□ -0.25
LINC00544-202ENST00000481738 SLC26A8Q96RN1 970 aa13.49□□□□□ -0.25
LINC00544-202ENST00000481738 NUTM2DQ5VT03 806 aaPredicted RBP13.48□□□□□ -0.25
LINC00544-202ENST00000481738 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
LINC00544-202ENST00000481738 LRRC7Q96NW7 1537 aa13.48□□□□□ -0.25
LINC00544-202ENST00000481738 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.47□□□□□ -0.25
LINC00544-202ENST00000481738 PLEKHG1Q9ULL1 1385 aa13.46□□□□□ -0.25
LINC00544-202ENST00000481738 TRPM2O94759 1503 aa13.46□□□□□ -0.25
LINC00544-202ENST00000481738 CLTCL1P53675 1640 aa13.46□□□□□ -0.26
LINC00544-202ENST00000481738 TOM1O60784 492 aa13.44□□□□□ -0.26
LINC00544-202ENST00000481738 KCNA6P17658 529 aa13.44□□□□□ -0.26
LINC00544-202ENST00000481738 ZNF326Q5BKZ1 582 aaKnown RBP13.44□□□□□ -0.26
LINC00544-202ENST00000481738 SCAF1Q9H7N4 1312 aaKnown RBP13.43□□□□□ -0.26
LINC00544-202ENST00000481738 PIP4K2BP78356 416 aa13.43□□□□□ -0.26
LINC00544-202ENST00000481738 SETD5Q9C0A6 1442 aa13.43□□□□□ -0.26
LINC00544-202ENST00000481738 FOXD1Q16676 465 aa13.42□□□□□ -0.26
LINC00544-202ENST00000481738 KIF1BO60333 1816 aa13.41□□□□□ -0.26
LINC00544-202ENST00000481738 MPHOSPH9Q99550 1183 aa13.41□□□□□ -0.26
LINC00544-202ENST00000481738 TBX22Q9Y458 520 aa13.41□□□□□ -0.26
LINC00544-202ENST00000481738 XIRP1Q702N8 1843 aaKnown RBP13.41□□□□□ -0.26
LINC00544-202ENST00000481738 NWD1Q149M9 1564 aa13.41□□□□□ -0.26
LINC00544-202ENST00000481738 ADAMTS13Q76LX8 1427 aa13.4□□□□□ -0.26
LINC00544-202ENST00000481738 PROSER2Q86WR7 435 aaPredicted RBP13.4□□□□□ -0.26
LINC00544-202ENST00000481738 TMEM94Q12767 1356 aa13.4□□□□□ -0.26
LINC00544-202ENST00000481738 ALKQ9UM73 1620 aa13.39□□□□□ -0.27
LINC00544-202ENST00000481738 RBM33Q96EV2 1170 aaKnown RBP13.39□□□□□ -0.27
LINC00544-202ENST00000481738 CHD2O14647 1828 aaKnown RBP13.39□□□□□ -0.27
LINC00544-202ENST00000481738 NEXMIFQ5QGS0 1516 aa13.39□□□□□ -0.27
LINC00544-202ENST00000481738 DIP2AQ14689 1571 aa13.38□□□□□ -0.27
LINC00544-202ENST00000481738 NKTRP30414 1462 aaKnown RBP13.38□□□□□ -0.27
LINC00544-202ENST00000481738 RAB3GAP2Q9H2M9 1393 aa13.38□□□□□ -0.27
LINC00544-202ENST00000481738 ACIN1Q9UKV3 1341 aaKnown RBP13.37□□□□□ -0.27
LINC00544-202ENST00000481738 NRXN3Q9Y4C0 1643 aa13.36□□□□□ -0.27
LINC00544-202ENST00000481738 PIK3R4Q99570 1358 aa13.35□□□□□ -0.27
LINC00544-202ENST00000481738 HSPA1LP34931 641 aa13.35□□□□□ -0.27
LINC00544-202ENST00000481738 CCDC144AA2RUR9 1427 aa13.35□□□□□ -0.27
LINC00544-202ENST00000481738 SETBP1Q9Y6X0 1596 aa13.35□□□□□ -0.27
LINC00544-202ENST00000481738 PTPRUQ92729 1446 aa13.33□□□□□ -0.28
LINC00544-202ENST00000481738 AMOTL2Q9Y2J4 779 aa13.33□□□□□ -0.28
LINC00544-202ENST00000481738 RPGRIP1LQ68CZ1 1315 aa13.33□□□□□ -0.28
LINC00544-202ENST00000481738 VGFO15240 615 aaPredicted RBP13.32□□□□□ -0.28
LINC00544-202ENST00000481738 MSH6P52701 1360 aa13.32□□□□□ -0.28
LINC00544-202ENST00000481738 PPLO60437 1756 aa13.31□□□□□ -0.28
LINC00544-202ENST00000481738 RGL3Q3MIN7 710 aa13.31□□□□□ -0.28
LINC00544-202ENST00000481738 METP08581 1390 aa13.31□□□□□ -0.28
LINC00544-202ENST00000481738 C14orf37Q86TY3 774 aa13.3□□□□□ -0.28
LINC00544-202ENST00000481738 SPATA31E1Q6ZUB1 1445 aa13.3□□□□□ -0.28
LINC00544-202ENST00000481738 XRN1Q8IZH2 1706 aaKnown RBP13.29□□□□□ -0.28
LINC00544-202ENST00000481738 NCOA3Q9Y6Q9 1424 aa13.29□□□□□ -0.28
LINC00544-202ENST00000481738 DISP3Q9P2K9 1392 aa13.28□□□□□ -0.28
LINC00544-202ENST00000481738 HRCP23327 699 aa13.27□□□□□ -0.29
LINC00544-202ENST00000481738 FAM135BQ49AJ0 1406 aa13.27□□□□□ -0.29
LINC00544-202ENST00000481738 SETD1AO15047 1707 aaKnown RBP13.26□□□□□ -0.29
LINC00544-202ENST00000481738 ADGRF5Q8IZF2 1346 aa13.26□□□□□ -0.29
LINC00544-202ENST00000481738 IFT172Q9UG01 1749 aa13.26□□□□□ -0.29
LINC00544-202ENST00000481738 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.25□□□□□ -0.29
LINC00544-202ENST00000481738 ROBO1Q9Y6N7 1651 aa13.25□□□□□ -0.29
LINC00544-202ENST00000481738 ANKRD30BQ9BXX2 1392 aa13.25□□□□□ -0.29
LINC00544-202ENST00000481738 C19orf44Q9H6X5 657 aa13.25□□□□□ -0.29
LINC00544-202ENST00000481738 SLAIN2Q9P270 581 aa13.25□□□□□ -0.29
LINC00544-202ENST00000481738 ATF3P18847 181 aa13.24□□□□□ -0.29
LINC00544-202ENST00000481738 CADPS2Q86UW7 1296 aa13.23□□□□□ -0.29
LINC00544-202ENST00000481738 ROBO2Q9HCK4 1378 aa13.2□□□□□ -0.3
LINC00544-202ENST00000481738 MED1Q15648 1581 aaPredicted RBP13.2□□□□□ -0.3
LINC00544-202ENST00000481738 PIK3C2GO75747 1445 aa13.2□□□□□ -0.3
LINC00544-202ENST00000481738 DCCP43146 1447 aa13.2□□□□□ -0.3
LINC00544-202ENST00000481738 PTCH1Q13635 1447 aa13.2□□□□□ -0.3
LINC00544-202ENST00000481738 ADGRL3Q9HAR2 1447 aa13.2□□□□□ -0.3
LINC00544-202ENST00000481738 NALCNQ8IZF0 1738 aa13.19□□□□□ -0.3
LINC00544-202ENST00000481738 MYOM2P54296 1465 aa13.18□□□□□ -0.3
LINC00544-202ENST00000481738 TMEM132EQ6IEE7 984 aa13.18□□□□□ -0.3
LINC00544-202ENST00000481738 STK26Q9P289 416 aa13.18□□□□□ -0.3
LINC00544-202ENST00000481738 PRAG1Q86YV5 1406 aa13.18□□□□□ -0.3
LINC00544-202ENST00000481738 PHLPP1O60346 1717 aa13.18□□□□□ -0.3
LINC00544-202ENST00000481738 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
LINC00544-202ENST00000481738 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
LINC00544-202ENST00000481738 MST1RQ04912 1400 aa13.16□□□□□ -0.3
LINC00544-202ENST00000481738 CFAP70Q5T0N1 1121 aa13.16□□□□□ -0.3
LINC00544-202ENST00000481738 ILDR2Q71H61 639 aa13.16□□□□□ -0.3
LINC00544-202ENST00000481738 C14orf93Q9H972 538 aaKnown RBP13.16□□□□□ -0.3
LINC00544-202ENST00000481738 LRPPRCP42704 1394 aaKnown RBP13.16□□□□□ -0.3
LINC00544-202ENST00000481738 BRINP3Q76B58 766 aa13.15□□□□□ -0.3
LINC00544-202ENST00000481738 KDM2AQ9Y2K7 1162 aa13.15□□□□□ -0.3
LINC00544-202ENST00000481738 DCAF11Q8TEB1 546 aa13.14□□□□□ -0.31
LINC00544-202ENST00000481738 TECPR2O15040 1411 aa13.13□□□□□ -0.31
LINC00544-202ENST00000481738 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
LINC00544-202ENST00000481738 LAMC1P11047 1609 aa13.13□□□□□ -0.31
LINC00544-202ENST00000481738 COL16A1Q07092 1604 aaPredicted RBP13.13□□□□□ -0.31
LINC00544-202ENST00000481738 AHDC1Q5TGY3 1603 aaPredicted RBP13.13□□□□□ -0.31
LINC00544-202ENST00000481738 KNDC1Q76NI1 1749 aa13.13□□□□□ -0.31
LINC00544-202ENST00000481738 ABCC11Q96J66 1382 aa13.13□□□□□ -0.31
LINC00544-202ENST00000481738 WAPLQ7Z5K2 1190 aa13.13□□□□□ -0.31
LINC00544-202ENST00000481738 PHF23Q9BUL5 403 aaPredicted RBP13.13□□□□□ -0.31
LINC00544-202ENST00000481738 DHX57Q6P158 1386 aaKnown RBP13.12□□□□□ -0.31
LINC00544-202ENST00000481738 C1orf167Q5SNV9 1468 aa13.11□□□□□ -0.31
LINC00544-202ENST00000481738 JCADQ9P266 1359 aa13.11□□□□□ -0.31
LINC00544-202ENST00000481738 PLEKHH1Q9ULM0 1364 aa13.11□□□□□ -0.31
LINC00544-202ENST00000481738 NHSL1Q5SYE7 1610 aa13.1□□□□□ -0.31
LINC00544-202ENST00000481738 CDC42BPGQ6DT37 1551 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms