RNA–Protein interactions for RNA: ENST00000480856.1

FNDC1-203, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 3

Gene FNDC1, Length 789 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-203ENST00000480856 RIMS2Q9UQ26 1411 aa24.01■■□□□ 1.43
FNDC1-203ENST00000480856 NUTM2DQ5VT03 806 aaPredicted RBP23.99■■□□□ 1.43
FNDC1-203ENST00000480856 ZNF335Q9H4Z2 1342 aaPredicted RBP23.99■■□□□ 1.43
FNDC1-203ENST00000480856 TRIM26Q12899 539 aaPredicted RBP23.97■■□□□ 1.43
FNDC1-203ENST00000480856 HDGFP51858 240 aaKnown RBP23.96■■□□□ 1.43
FNDC1-203ENST00000480856 CCDC144AA2RUR9 1427 aa23.95■■□□□ 1.42
FNDC1-203ENST00000480856 ZFYVE9O95405 1425 aa23.95■■□□□ 1.42
FNDC1-203ENST00000480856 HRCP23327 699 aa23.93■■□□□ 1.42
FNDC1-203ENST00000480856 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.93■■□□□ 1.42
FNDC1-203ENST00000480856 LTBP4Q8N2S1 1624 aa23.92■■□□□ 1.42
FNDC1-203ENST00000480856 CERKQ8TCT0 537 aa23.91■■□□□ 1.42
FNDC1-203ENST00000480856 SLC26A8Q96RN1 970 aa23.91■■□□□ 1.42
FNDC1-203ENST00000480856 PLEKHG1Q9ULL1 1385 aa23.88■■□□□ 1.41
FNDC1-203ENST00000480856 NEXMIFQ5QGS0 1516 aa23.86■■□□□ 1.41
FNDC1-203ENST00000480856 RGL3Q3MIN7 710 aa23.86■■□□□ 1.41
FNDC1-203ENST00000480856 STRCP1A6NGW2 1772 aa23.85■■□□□ 1.41
FNDC1-203ENST00000480856 CPS1P31327 1500 aa23.83■■□□□ 1.41
FNDC1-203ENST00000480856 PPLO60437 1756 aa23.82■■□□□ 1.4
FNDC1-203ENST00000480856 ANKRD30BQ9BXX2 1392 aa23.78■■□□□ 1.4
FNDC1-203ENST00000480856 DIP2AQ14689 1571 aa23.78■■□□□ 1.4
FNDC1-203ENST00000480856 SPATA31E1Q6ZUB1 1445 aa23.77■■□□□ 1.4
FNDC1-203ENST00000480856 RPGRIP1LQ68CZ1 1315 aa23.77■■□□□ 1.4
FNDC1-203ENST00000480856 VGFO15240 615 aaPredicted RBP23.76■■□□□ 1.39
FNDC1-203ENST00000480856 NRXN3Q9Y4C0 1643 aa23.76■■□□□ 1.39
FNDC1-203ENST00000480856 ADAMTS13Q76LX8 1427 aa23.76■■□□□ 1.39
FNDC1-203ENST00000480856 SETBP1Q9Y6X0 1596 aa23.75■■□□□ 1.39
FNDC1-203ENST00000480856 IFT172Q9UG01 1749 aa23.75■■□□□ 1.39
FNDC1-203ENST00000480856 CHD2O14647 1828 aaKnown RBP23.73■■□□□ 1.39
FNDC1-203ENST00000480856 FBXO41Q8TF61 875 aa23.73■■□□□ 1.39
FNDC1-203ENST00000480856 TBX22Q9Y458 520 aa23.73■■□□□ 1.39
FNDC1-203ENST00000480856 KCNA6P17658 529 aa23.72■■□□□ 1.39
FNDC1-203ENST00000480856 ILDR1Q86SU0 546 aaPredicted RBP23.72■■□□□ 1.39
FNDC1-203ENST00000480856 IQSEC2Q5JU85 1478 aa23.72■■□□□ 1.39
FNDC1-203ENST00000480856 NWD1Q149M9 1564 aa23.71■■□□□ 1.39
FNDC1-203ENST00000480856 LRRC7Q96NW7 1537 aa23.71■■□□□ 1.39
FNDC1-203ENST00000480856 PROSER2Q86WR7 435 aaPredicted RBP23.68■■□□□ 1.38
FNDC1-203ENST00000480856 RBM33Q96EV2 1170 aaKnown RBP23.68■■□□□ 1.38
FNDC1-203ENST00000480856 PCGF6Q9BYE7 350 aa23.68■■□□□ 1.38
FNDC1-203ENST00000480856 ADGRF5Q8IZF2 1346 aa23.67■■□□□ 1.38
FNDC1-203ENST00000480856 UBAP1LF5GYI3 381 aa23.67■■□□□ 1.38
FNDC1-203ENST00000480856 XIRP1Q702N8 1843 aaKnown RBP23.67■■□□□ 1.38
FNDC1-203ENST00000480856 NKTRP30414 1462 aaKnown RBP23.67■■□□□ 1.38
FNDC1-203ENST00000480856 ALKQ9UM73 1620 aa23.65■■□□□ 1.38
FNDC1-203ENST00000480856 METP08581 1390 aa23.65■■□□□ 1.38
FNDC1-203ENST00000480856 SETD1AO15047 1707 aaKnown RBP23.64■■□□□ 1.37
FNDC1-203ENST00000480856 TMEM94Q12767 1356 aa23.64■■□□□ 1.37
FNDC1-203ENST00000480856 DHX57Q6P158 1386 aaKnown RBP23.64■■□□□ 1.37
FNDC1-203ENST00000480856 PIK3R4Q99570 1358 aa23.64■■□□□ 1.37
FNDC1-203ENST00000480856 SCAF1Q9H7N4 1312 aaKnown RBP23.63■■□□□ 1.37
FNDC1-203ENST00000480856 AMOTL2Q9Y2J4 779 aa23.63■■□□□ 1.37
FNDC1-203ENST00000480856 KDM2AQ9Y2K7 1162 aa23.63■■□□□ 1.37
FNDC1-203ENST00000480856 PTPRUQ92729 1446 aa23.62■■□□□ 1.37
FNDC1-203ENST00000480856 C14orf37Q86TY3 774 aa23.61■■□□□ 1.37
FNDC1-203ENST00000480856 DCAF11Q8TEB1 546 aa23.61■■□□□ 1.37
FNDC1-203ENST00000480856 XRN1Q8IZH2 1706 aaKnown RBP23.6■■□□□ 1.37
FNDC1-203ENST00000480856 MYOM2P54296 1465 aa23.6■■□□□ 1.37
FNDC1-203ENST00000480856 TOM1O60784 492 aa23.58■■□□□ 1.37
FNDC1-203ENST00000480856 PIP4K2BP78356 416 aa23.58■■□□□ 1.37
FNDC1-203ENST00000480856 NEUROD1Q13562 356 aa23.58■■□□□ 1.37
FNDC1-203ENST00000480856 PIK3C2GO75747 1445 aa23.58■■□□□ 1.36
FNDC1-203ENST00000480856 SIN3AQ96ST3 1273 aa23.57■■□□□ 1.36
FNDC1-203ENST00000480856 LAMC1P11047 1609 aa23.54■■□□□ 1.36
FNDC1-203ENST00000480856 MSH6P52701 1360 aa23.53■■□□□ 1.36
FNDC1-203ENST00000480856 NRXN1Q9ULB1 1477 aa23.52■■□□□ 1.36
FNDC1-203ENST00000480856 TMEM132EQ6IEE7 984 aa23.52■■□□□ 1.36
FNDC1-203ENST00000480856 STK26Q9P289 416 aa23.52■■□□□ 1.36
FNDC1-203ENST00000480856 CFAP70Q5T0N1 1121 aa23.51■■□□□ 1.35
FNDC1-203ENST00000480856 ASXL1Q8IXJ9 1541 aa23.49■■□□□ 1.35
FNDC1-203ENST00000480856 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.47■■□□□ 1.35
FNDC1-203ENST00000480856 C14orf93Q9H972 538 aaKnown RBP23.47■■□□□ 1.35
FNDC1-203ENST00000480856 ROBO2Q9HCK4 1378 aa23.46■■□□□ 1.35
FNDC1-203ENST00000480856 NALCNQ8IZF0 1738 aa23.45■■□□□ 1.34
FNDC1-203ENST00000480856 PTCH1Q13635 1447 aa23.45■■□□□ 1.34
FNDC1-203ENST00000480856 NCOA3Q9Y6Q9 1424 aa23.44■■□□□ 1.34
FNDC1-203ENST00000480856 STAC3Q96MF2 364 aa23.44■■□□□ 1.34
FNDC1-203ENST00000480856 KNDC1Q76NI1 1749 aa23.44■■□□□ 1.34
FNDC1-203ENST00000480856 YTHDC2Q9H6S0 1430 aaKnown RBP23.43■■□□□ 1.34
FNDC1-203ENST00000480856 LRPPRCP42704 1394 aaKnown RBP23.43■■□□□ 1.34
FNDC1-203ENST00000480856 ATF3P18847 181 aa23.43■■□□□ 1.34
FNDC1-203ENST00000480856 L3MBTL2Q969R5 705 aa23.43■■□□□ 1.34
FNDC1-203ENST00000480856 C19orf44Q9H6X5 657 aa23.42■■□□□ 1.34
FNDC1-203ENST00000480856 ADGRL3Q9HAR2 1447 aa23.4■■□□□ 1.34
FNDC1-203ENST00000480856 TONSLQ96HA7 1378 aa23.39■■□□□ 1.33
FNDC1-203ENST00000480856 ROBO1Q9Y6N7 1651 aa23.38■■□□□ 1.33
FNDC1-203ENST00000480856 CADPS2Q86UW7 1296 aa23.38■■□□□ 1.33
FNDC1-203ENST00000480856 PRAG1Q86YV5 1406 aa23.38■■□□□ 1.33
FNDC1-203ENST00000480856 ABCC11Q96J66 1382 aa23.38■■□□□ 1.33
FNDC1-203ENST00000480856 ADGRB1O14514 1584 aa23.37■■□□□ 1.33
FNDC1-203ENST00000480856 TECPR2O15040 1411 aa23.37■■□□□ 1.33
FNDC1-203ENST00000480856 WAPLQ7Z5K2 1190 aa23.37■■□□□ 1.33
FNDC1-203ENST00000480856 SLAIN2Q9P270 581 aa23.37■■□□□ 1.33
FNDC1-203ENST00000480856 SAFB2Q14151 953 aaKnown RBP eCLIP23.35■■□□□ 1.33
FNDC1-203ENST00000480856 TRAK1Q9UPV9 953 aa23.35■■□□□ 1.33
FNDC1-203ENST00000480856 KIAA1210Q9ULL0 1709 aa23.35■■□□□ 1.33
FNDC1-203ENST00000480856 PLEKHH1Q9ULM0 1364 aa23.35■■□□□ 1.33
FNDC1-203ENST00000480856 DCCP43146 1447 aa23.34■■□□□ 1.33
FNDC1-203ENST00000480856 HSPA1LP34931 641 aa23.34■■□□□ 1.33
FNDC1-203ENST00000480856 POGKQ9P215 609 aa23.33■■□□□ 1.33
FNDC1-203ENST00000480856 CCER1Q8TC90 406 aaPredicted RBP23.31■■□□□ 1.32
FNDC1-203ENST00000480856 PRAM1Q96QH2 718 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms