RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 SLC26A8Q96RN1 970 aa22.59■■□□□ 1.21
TDP2-205ENST00000480495 PLEKHG1Q9ULL1 1385 aa22.59■■□□□ 1.21
TDP2-205ENST00000480495 TRIM52Q96A61 297 aa22.58■■□□□ 1.21
TDP2-205ENST00000480495 BCANQ96GW7 911 aa22.58■■□□□ 1.21
TDP2-205ENST00000480495 KCNA6P17658 529 aa22.57■■□□□ 1.2
TDP2-205ENST00000480495 MYO5BQ9ULV0 1848 aa22.57■■□□□ 1.2
TDP2-205ENST00000480495 SPHKAPQ2M3C7 1700 aa22.55■■□□□ 1.2
TDP2-205ENST00000480495 PIP4K2BP78356 416 aa22.53■■□□□ 1.2
TDP2-205ENST00000480495 SCAF1Q9H7N4 1312 aaKnown RBP22.53■■□□□ 1.2
TDP2-205ENST00000480495 SLC4A1APQ9BWU0 796 aaKnown RBP22.51■■□□□ 1.19
TDP2-205ENST00000480495 TBX22Q9Y458 520 aa22.51■■□□□ 1.19
TDP2-205ENST00000480495 TRPM2O94759 1503 aa22.51■■□□□ 1.19
TDP2-205ENST00000480495 NKTRP30414 1462 aaKnown RBP22.48■■□□□ 1.19
TDP2-205ENST00000480495 NWD1Q149M9 1564 aa22.48■■□□□ 1.19
TDP2-205ENST00000480495 NUTM2DQ5VT03 806 aaPredicted RBP22.48■■□□□ 1.19
TDP2-205ENST00000480495 ALKQ9UM73 1620 aa22.48■■□□□ 1.19
TDP2-205ENST00000480495 ZNF326Q5BKZ1 582 aaKnown RBP22.47■■□□□ 1.19
TDP2-205ENST00000480495 PROSER2Q86WR7 435 aaPredicted RBP22.47■■□□□ 1.19
TDP2-205ENST00000480495 SENP3Q9H4L4 574 aaPredicted RBP22.47■■□□□ 1.19
TDP2-205ENST00000480495 ACIN1Q9UKV3 1341 aaKnown RBP22.47■■□□□ 1.19
TDP2-205ENST00000480495 TMEM94Q12767 1356 aa22.47■■□□□ 1.19
TDP2-205ENST00000480495 ADAMTS13Q76LX8 1427 aa22.46■■□□□ 1.19
TDP2-205ENST00000480495 DIP2AQ14689 1571 aa22.46■■□□□ 1.19
TDP2-205ENST00000480495 CLTCL1P53675 1640 aa22.46■■□□□ 1.19
TDP2-205ENST00000480495 PIK3R4Q99570 1358 aa22.44■■□□□ 1.18
TDP2-205ENST00000480495 HSPA1LP34931 641 aa22.43■■□□□ 1.18
TDP2-205ENST00000480495 XIRP1Q702N8 1843 aaKnown RBP22.42■■□□□ 1.18
TDP2-205ENST00000480495 CHD2O14647 1828 aaKnown RBP22.4■■□□□ 1.18
TDP2-205ENST00000480495 SETD5Q9C0A6 1442 aa22.4■■□□□ 1.18
TDP2-205ENST00000480495 MPHOSPH9Q99550 1183 aa22.38■■□□□ 1.17
TDP2-205ENST00000480495 KIF1BO60333 1816 aa22.38■■□□□ 1.17
TDP2-205ENST00000480495 SETBP1Q9Y6X0 1596 aa22.38■■□□□ 1.17
TDP2-205ENST00000480495 RBM33Q96EV2 1170 aaKnown RBP22.37■■□□□ 1.17
TDP2-205ENST00000480495 NCOA3Q9Y6Q9 1424 aa22.37■■□□□ 1.17
TDP2-205ENST00000480495 DISP3Q9P2K9 1392 aa22.37■■□□□ 1.17
TDP2-205ENST00000480495 NEXMIFQ5QGS0 1516 aa22.36■■□□□ 1.17
TDP2-205ENST00000480495 MSH6P52701 1360 aa22.36■■□□□ 1.17
TDP2-205ENST00000480495 RPGRIP1LQ68CZ1 1315 aa22.35■■□□□ 1.17
TDP2-205ENST00000480495 FOXD1Q16676 465 aa22.35■■□□□ 1.17
TDP2-205ENST00000480495 VGFO15240 615 aaPredicted RBP22.34■■□□□ 1.17
TDP2-205ENST00000480495 FAM135BQ49AJ0 1406 aa22.33■■□□□ 1.17
TDP2-205ENST00000480495 NRXN3Q9Y4C0 1643 aa22.33■■□□□ 1.17
TDP2-205ENST00000480495 AMOTL2Q9Y2J4 779 aa22.33■■□□□ 1.17
TDP2-205ENST00000480495 CCDC144AA2RUR9 1427 aa22.31■■□□□ 1.16
TDP2-205ENST00000480495 PTPRUQ92729 1446 aa22.31■■□□□ 1.16
TDP2-205ENST00000480495 RAB3GAP2Q9H2M9 1393 aa22.29■■□□□ 1.16
TDP2-205ENST00000480495 METP08581 1390 aa22.28■■□□□ 1.16
TDP2-205ENST00000480495 C14orf37Q86TY3 774 aa22.28■■□□□ 1.16
TDP2-205ENST00000480495 C19orf44Q9H6X5 657 aa22.27■■□□□ 1.16
TDP2-205ENST00000480495 SLAIN2Q9P270 581 aa22.27■■□□□ 1.16
TDP2-205ENST00000480495 XRN1Q8IZH2 1706 aaKnown RBP22.25■■□□□ 1.15
TDP2-205ENST00000480495 CADPS2Q86UW7 1296 aa22.24■■□□□ 1.15
TDP2-205ENST00000480495 SPATA31E1Q6ZUB1 1445 aa22.23■■□□□ 1.15
TDP2-205ENST00000480495 ATF3P18847 181 aa22.22■■□□□ 1.15
TDP2-205ENST00000480495 HRCP23327 699 aa22.22■■□□□ 1.15
TDP2-205ENST00000480495 ROBO1Q9Y6N7 1651 aa22.21■■□□□ 1.15
TDP2-205ENST00000480495 PPLO60437 1756 aa22.21■■□□□ 1.15
TDP2-205ENST00000480495 RGL3Q3MIN7 710 aa22.21■■□□□ 1.15
TDP2-205ENST00000480495 ANKRD30BQ9BXX2 1392 aa22.21■■□□□ 1.15
TDP2-205ENST00000480495 DCCP43146 1447 aa22.19■■□□□ 1.14
TDP2-205ENST00000480495 MED1Q15648 1581 aaPredicted RBP22.19■■□□□ 1.14
TDP2-205ENST00000480495 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.18■■□□□ 1.14
TDP2-205ENST00000480495 PTCH1Q13635 1447 aa22.15■■□□□ 1.14
TDP2-205ENST00000480495 SETD1AO15047 1707 aaKnown RBP22.15■■□□□ 1.14
TDP2-205ENST00000480495 ADGRF5Q8IZF2 1346 aa22.15■■□□□ 1.14
TDP2-205ENST00000480495 ILDR2Q71H61 639 aa22.15■■□□□ 1.14
TDP2-205ENST00000480495 PRAG1Q86YV5 1406 aa22.14■■□□□ 1.14
TDP2-205ENST00000480495 ADGRL3Q9HAR2 1447 aa22.14■■□□□ 1.13
TDP2-205ENST00000480495 IFT172Q9UG01 1749 aa22.1■■□□□ 1.13
TDP2-205ENST00000480495 ROBO2Q9HCK4 1378 aa22.1■■□□□ 1.13
TDP2-205ENST00000480495 PIK3C2GO75747 1445 aa22.08■■□□□ 1.13
TDP2-205ENST00000480495 PHF23Q9BUL5 403 aaPredicted RBP22.08■■□□□ 1.13
TDP2-205ENST00000480495 MST1RQ04912 1400 aa22.07■■□□□ 1.12
TDP2-205ENST00000480495 PHLPP1O60346 1717 aa22.07■■□□□ 1.12
TDP2-205ENST00000480495 BRINP3Q76B58 766 aa22.07■■□□□ 1.12
TDP2-205ENST00000480495 MYOM2P54296 1465 aa22.05■■□□□ 1.12
TDP2-205ENST00000480495 JCADQ9P266 1359 aa22.05■■□□□ 1.12
TDP2-205ENST00000480495 AHDC1Q5TGY3 1603 aaPredicted RBP22.05■■□□□ 1.12
TDP2-205ENST00000480495 LRPPRCP42704 1394 aaKnown RBP22.04■■□□□ 1.12
TDP2-205ENST00000480495 NALCNQ8IZF0 1738 aa22.04■■□□□ 1.12
TDP2-205ENST00000480495 NRXN1Q9ULB1 1477 aa22.03■■□□□ 1.12
TDP2-205ENST00000480495 TECPR2O15040 1411 aa22.03■■□□□ 1.12
TDP2-205ENST00000480495 COL16A1Q07092 1604 aaPredicted RBP22.02■■□□□ 1.12
TDP2-205ENST00000480495 ABCC11Q96J66 1382 aa22.02■■□□□ 1.12
TDP2-205ENST00000480495 C14orf93Q9H972 538 aaKnown RBP22.02■■□□□ 1.12
TDP2-205ENST00000480495 ASXL1Q8IXJ9 1541 aa22.01■■□□□ 1.11
TDP2-205ENST00000480495 STK26Q9P289 416 aa22.01■■□□□ 1.11
TDP2-205ENST00000480495 SOCS7O14512 581 aa22■■□□□ 1.11
TDP2-205ENST00000480495 TMEM132EQ6IEE7 984 aa22■■□□□ 1.11
TDP2-205ENST00000480495 C1orf167Q5SNV9 1468 aa21.99■■□□□ 1.11
TDP2-205ENST00000480495 STAC3Q96MF2 364 aa21.99■■□□□ 1.11
TDP2-205ENST00000480495 YTHDC2Q9H6S0 1430 aaKnown RBP21.98■■□□□ 1.11
TDP2-205ENST00000480495 SIRT1Q96EB6 747 aa21.97■■□□□ 1.11
TDP2-205ENST00000480495 LAMC1P11047 1609 aa21.96■■□□□ 1.11
TDP2-205ENST00000480495 CFAP70Q5T0N1 1121 aa21.96■■□□□ 1.11
TDP2-205ENST00000480495 SPATA31A6Q5VVP1 1343 aa21.96■■□□□ 1.11
TDP2-205ENST00000480495 DHX57Q6P158 1386 aaKnown RBP21.96■■□□□ 1.11
TDP2-205ENST00000480495 WAPLQ7Z5K2 1190 aa21.95■■□□□ 1.1
TDP2-205ENST00000480495 KNDC1Q76NI1 1749 aa21.94■■□□□ 1.1
TDP2-205ENST00000480495 CDC42BPGQ6DT37 1551 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms