RNA–Protein interactions for RNA: ENST00000480289.1

ATP6V1C2-203, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 2

Gene ATP6V1C2, Length 385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-203ENST00000480289 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.48■□□□□ 0.39
ATP6V1C2-203ENST00000480289 MPHOSPH9Q99550 1183 aa17.48■□□□□ 0.39
ATP6V1C2-203ENST00000480289 TRPM2O94759 1503 aa17.47■□□□□ 0.39
ATP6V1C2-203ENST00000480289 CPS1P31327 1500 aa17.47■□□□□ 0.39
ATP6V1C2-203ENST00000480289 MYO5BQ9ULV0 1848 aa17.45■□□□□ 0.38
ATP6V1C2-203ENST00000480289 RAB3GAP2Q9H2M9 1393 aa17.45■□□□□ 0.38
ATP6V1C2-203ENST00000480289 PLEKHG1Q9ULL1 1385 aa17.45■□□□□ 0.38
ATP6V1C2-203ENST00000480289 PPP1R15AO75807 674 aaPredicted RBP17.45■□□□□ 0.38
ATP6V1C2-203ENST00000480289 FOXD1Q16676 465 aa17.45■□□□□ 0.38
ATP6V1C2-203ENST00000480289 SLC26A8Q96RN1 970 aa17.45■□□□□ 0.38
ATP6V1C2-203ENST00000480289 NUTM2DQ5VT03 806 aaPredicted RBP17.43■□□□□ 0.38
ATP6V1C2-203ENST00000480289 BCANQ96GW7 911 aa17.43■□□□□ 0.38
ATP6V1C2-203ENST00000480289 CLTCL1P53675 1640 aa17.43■□□□□ 0.38
ATP6V1C2-203ENST00000480289 HRCP23327 699 aa17.42■□□□□ 0.38
ATP6V1C2-203ENST00000480289 ZNF326Q5BKZ1 582 aaKnown RBP17.41■□□□□ 0.38
ATP6V1C2-203ENST00000480289 STRCP1A6NGW2 1772 aa17.4■□□□□ 0.38
ATP6V1C2-203ENST00000480289 KCNA6P17658 529 aa17.4■□□□□ 0.38
ATP6V1C2-203ENST00000480289 TBX22Q9Y458 520 aa17.4■□□□□ 0.38
ATP6V1C2-203ENST00000480289 LRRC7Q96NW7 1537 aa17.39■□□□□ 0.37
ATP6V1C2-203ENST00000480289 UBAP1LF5GYI3 381 aa17.38■□□□□ 0.37
ATP6V1C2-203ENST00000480289 ADAMTS13Q76LX8 1427 aa17.38■□□□□ 0.37
ATP6V1C2-203ENST00000480289 RPGRIP1LQ68CZ1 1315 aa17.35■□□□□ 0.37
ATP6V1C2-203ENST00000480289 CCDC144AA2RUR9 1427 aa17.35■□□□□ 0.37
ATP6V1C2-203ENST00000480289 KIF1BO60333 1816 aa17.34■□□□□ 0.37
ATP6V1C2-203ENST00000480289 NEXMIFQ5QGS0 1516 aa17.34■□□□□ 0.37
ATP6V1C2-203ENST00000480289 TOM1O60784 492 aa17.33■□□□□ 0.36
ATP6V1C2-203ENST00000480289 PIK3R4Q99570 1358 aa17.32■□□□□ 0.36
ATP6V1C2-203ENST00000480289 VGFO15240 615 aaPredicted RBP17.32■□□□□ 0.36
ATP6V1C2-203ENST00000480289 DIP2AQ14689 1571 aa17.32■□□□□ 0.36
ATP6V1C2-203ENST00000480289 NWD1Q149M9 1564 aa17.32■□□□□ 0.36
ATP6V1C2-203ENST00000480289 PROSER2Q86WR7 435 aaPredicted RBP17.31■□□□□ 0.36
ATP6V1C2-203ENST00000480289 SETBP1Q9Y6X0 1596 aa17.31■□□□□ 0.36
ATP6V1C2-203ENST00000480289 NKTRP30414 1462 aaKnown RBP17.31■□□□□ 0.36
ATP6V1C2-203ENST00000480289 SPATA31E1Q6ZUB1 1445 aa17.3■□□□□ 0.36
ATP6V1C2-203ENST00000480289 TMEM94Q12767 1356 aa17.3■□□□□ 0.36
ATP6V1C2-203ENST00000480289 NRXN3Q9Y4C0 1643 aa17.29■□□□□ 0.36
ATP6V1C2-203ENST00000480289 CHD2O14647 1828 aaKnown RBP17.28■□□□□ 0.36
ATP6V1C2-203ENST00000480289 RGL3Q3MIN7 710 aa17.28■□□□□ 0.36
ATP6V1C2-203ENST00000480289 RBM33Q96EV2 1170 aaKnown RBP17.28■□□□□ 0.36
ATP6V1C2-203ENST00000480289 ANKRD30BQ9BXX2 1392 aa17.28■□□□□ 0.36
ATP6V1C2-203ENST00000480289 AMOTL2Q9Y2J4 779 aa17.27■□□□□ 0.36
ATP6V1C2-203ENST00000480289 ALKQ9UM73 1620 aa17.27■□□□□ 0.36
ATP6V1C2-203ENST00000480289 PTPRUQ92729 1446 aa17.27■□□□□ 0.35
ATP6V1C2-203ENST00000480289 METP08581 1390 aa17.27■□□□□ 0.35
ATP6V1C2-203ENST00000480289 PIP4K2BP78356 416 aa17.26■□□□□ 0.35
ATP6V1C2-203ENST00000480289 XIRP1Q702N8 1843 aaKnown RBP17.26■□□□□ 0.35
ATP6V1C2-203ENST00000480289 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
ATP6V1C2-203ENST00000480289 NCOA3Q9Y6Q9 1424 aa17.23■□□□□ 0.35
ATP6V1C2-203ENST00000480289 PPLO60437 1756 aa17.23■□□□□ 0.35
ATP6V1C2-203ENST00000480289 ADGRF5Q8IZF2 1346 aa17.22■□□□□ 0.35
ATP6V1C2-203ENST00000480289 MSH6P52701 1360 aa17.2■□□□□ 0.34
ATP6V1C2-203ENST00000480289 HSPA1LP34931 641 aa17.19■□□□□ 0.34
ATP6V1C2-203ENST00000480289 C19orf44Q9H6X5 657 aa17.18■□□□□ 0.34
ATP6V1C2-203ENST00000480289 XRN1Q8IZH2 1706 aaKnown RBP17.18■□□□□ 0.34
ATP6V1C2-203ENST00000480289 IFT172Q9UG01 1749 aa17.16■□□□□ 0.34
ATP6V1C2-203ENST00000480289 TRIM26Q12899 539 aaPredicted RBP17.16■□□□□ 0.34
ATP6V1C2-203ENST00000480289 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
ATP6V1C2-203ENST00000480289 SETD1AO15047 1707 aaKnown RBP17.16■□□□□ 0.34
ATP6V1C2-203ENST00000480289 PIK3C2GO75747 1445 aa17.15■□□□□ 0.34
ATP6V1C2-203ENST00000480289 FAM135BQ49AJ0 1406 aa17.15■□□□□ 0.34
ATP6V1C2-203ENST00000480289 SLAIN2Q9P270 581 aa17.15■□□□□ 0.34
ATP6V1C2-203ENST00000480289 NRXN1Q9ULB1 1477 aa17.14■□□□□ 0.33
ATP6V1C2-203ENST00000480289 PRAG1Q86YV5 1406 aa17.13■□□□□ 0.33
ATP6V1C2-203ENST00000480289 MYOM2P54296 1465 aa17.13■□□□□ 0.33
ATP6V1C2-203ENST00000480289 CADPS2Q86UW7 1296 aa17.13■□□□□ 0.33
ATP6V1C2-203ENST00000480289 C14orf93Q9H972 538 aaKnown RBP17.13■□□□□ 0.33
ATP6V1C2-203ENST00000480289 ATF3P18847 181 aa17.12■□□□□ 0.33
ATP6V1C2-203ENST00000480289 ROBO2Q9HCK4 1378 aa17.12■□□□□ 0.33
ATP6V1C2-203ENST00000480289 PTCH1Q13635 1447 aa17.12■□□□□ 0.33
ATP6V1C2-203ENST00000480289 STAC3Q96MF2 364 aa17.11■□□□□ 0.33
ATP6V1C2-203ENST00000480289 TMEM132EQ6IEE7 984 aa17.1■□□□□ 0.33
ATP6V1C2-203ENST00000480289 DCAF11Q8TEB1 546 aa17.1■□□□□ 0.33
ATP6V1C2-203ENST00000480289 DHX57Q6P158 1386 aaKnown RBP17.1■□□□□ 0.33
ATP6V1C2-203ENST00000480289 CFAP70Q5T0N1 1121 aa17.09■□□□□ 0.33
ATP6V1C2-203ENST00000480289 LRPPRCP42704 1394 aaKnown RBP17.09■□□□□ 0.33
ATP6V1C2-203ENST00000480289 DCCP43146 1447 aa17.09■□□□□ 0.33
ATP6V1C2-203ENST00000480289 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.09■□□□□ 0.33
ATP6V1C2-203ENST00000480289 ADGRL3Q9HAR2 1447 aa17.08■□□□□ 0.32
ATP6V1C2-203ENST00000480289 ABCC11Q96J66 1382 aa17.08■□□□□ 0.32
ATP6V1C2-203ENST00000480289 KDM2AQ9Y2K7 1162 aa17.08■□□□□ 0.32
ATP6V1C2-203ENST00000480289 ASXL1Q8IXJ9 1541 aa17.07■□□□□ 0.32
ATP6V1C2-203ENST00000480289 TECPR2O15040 1411 aa17.07■□□□□ 0.32
ATP6V1C2-203ENST00000480289 STK26Q9P289 416 aa17.07■□□□□ 0.32
ATP6V1C2-203ENST00000480289 ROBO1Q9Y6N7 1651 aa17.06■□□□□ 0.32
ATP6V1C2-203ENST00000480289 YTHDC2Q9H6S0 1430 aaKnown RBP17.05■□□□□ 0.32
ATP6V1C2-203ENST00000480289 SIRT1Q96EB6 747 aa17.04■□□□□ 0.32
ATP6V1C2-203ENST00000480289 WAPLQ7Z5K2 1190 aa17.03■□□□□ 0.32
ATP6V1C2-203ENST00000480289 MST1RQ04912 1400 aa17.03■□□□□ 0.32
ATP6V1C2-203ENST00000480289 LAMC1P11047 1609 aa17.02■□□□□ 0.31
ATP6V1C2-203ENST00000480289 BRINP3Q76B58 766 aa17.01■□□□□ 0.31
ATP6V1C2-203ENST00000480289 SIN3AQ96ST3 1273 aa17.01■□□□□ 0.31
ATP6V1C2-203ENST00000480289 NALCNQ8IZF0 1738 aa17.01■□□□□ 0.31
ATP6V1C2-203ENST00000480289 PLEKHH1Q9ULM0 1364 aa17■□□□□ 0.31
ATP6V1C2-203ENST00000480289 ADGRB1O14514 1584 aa16.99■□□□□ 0.31
ATP6V1C2-203ENST00000480289 KNDC1Q76NI1 1749 aa16.99■□□□□ 0.31
ATP6V1C2-203ENST00000480289 DISP3Q9P2K9 1392 aa16.98■□□□□ 0.31
ATP6V1C2-203ENST00000480289 L3MBTL2Q969R5 705 aa16.97■□□□□ 0.31
ATP6V1C2-203ENST00000480289 C1orf167Q5SNV9 1468 aa16.97■□□□□ 0.31
ATP6V1C2-203ENST00000480289 NEUROD1Q13562 356 aa16.96■□□□□ 0.31
ATP6V1C2-203ENST00000480289 PRAM1Q96QH2 718 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms