RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 CARMIL2Q6F5E8 1435 aa26.71■■□□□ 1.87
COL13A1-208ENST00000479733 PANK1Q8TE04 598 aa26.7■■□□□ 1.87
COL13A1-208ENST00000479733 ATP10BO94823 1461 aa26.7■■□□□ 1.86
COL13A1-208ENST00000479733 PRDM15P57071 1507 aaPredicted RBP26.7■■□□□ 1.86
COL13A1-208ENST00000479733 UBE2Q2Q8WVN8 375 aa26.69■■□□□ 1.86
COL13A1-208ENST00000479733 SPRYD3Q8NCJ5 442 aa26.66■■□□□ 1.86
COL13A1-208ENST00000479733 BECN1Q14457 450 aa26.65■■□□□ 1.86
COL13A1-208ENST00000479733 TRMT2AQ8IZ69 625 aaKnown RBP26.65■■□□□ 1.86
COL13A1-208ENST00000479733 WDR7Q9Y4E6 1490 aa26.65■■□□□ 1.86
COL13A1-208ENST00000479733 EIF3AQ14152 1382 aaKnown RBP26.64■■□□□ 1.86
COL13A1-208ENST00000479733 RSPH6AQ9H0K4 717 aa26.63■■□□□ 1.85
COL13A1-208ENST00000479733 NEUROD2Q15784 382 aa26.63■■□□□ 1.85
COL13A1-208ENST00000479733 CCDC141Q6ZP82 1450 aa26.63■■□□□ 1.85
COL13A1-208ENST00000479733 NKTRP30414 1462 aaKnown RBP26.62■■□□□ 1.85
COL13A1-208ENST00000479733 CLUAP1Q96AJ1 413 aa26.62■■□□□ 1.85
COL13A1-208ENST00000479733 E9PSI1 815 aa26.61■■□□□ 1.85
COL13A1-208ENST00000479733 SYNJ2O15056 1496 aa26.61■■□□□ 1.85
COL13A1-208ENST00000479733 RRAGDQ9NQL2 400 aaPredicted RBP26.6■■□□□ 1.85
COL13A1-208ENST00000479733 CENPJQ9HC77 1338 aaPredicted RBP26.58■■□□□ 1.84
COL13A1-208ENST00000479733 CGNL1Q0VF96 1302 aa26.57■■□□□ 1.84
COL13A1-208ENST00000479733 GZF1Q9H116 711 aaPredicted RBP26.57■■□□□ 1.84
COL13A1-208ENST00000479733 MAPK8IP3Q9UPT6 1336 aa26.56■■□□□ 1.84
COL13A1-208ENST00000479733 CDCA8Q53HL2 280 aa26.55■■□□□ 1.84
COL13A1-208ENST00000479733 BCL2L13Q9BXK5 485 aa26.55■■□□□ 1.84
COL13A1-208ENST00000479733 RSPH4AQ5TD94 716 aa26.54■■□□□ 1.84
COL13A1-208ENST00000479733 RRP7AQ9Y3A4 280 aaKnown RBP26.54■■□□□ 1.84
COL13A1-208ENST00000479733 TNNQ9UQP3 1299 aa26.54■■□□□ 1.84
COL13A1-208ENST00000479733 ABCA8O94911 1581 aa26.53■■□□□ 1.84
COL13A1-208ENST00000479733 PDE3AQ14432 1141 aa26.53■■□□□ 1.84
COL13A1-208ENST00000479733 UPF2Q9HAU5 1272 aaKnown RBP26.53■■□□□ 1.84
COL13A1-208ENST00000479733 ARHGEF5Q12774 1597 aa26.53■■□□□ 1.84
COL13A1-208ENST00000479733 SAMD9LQ8IVG5 1584 aa26.52■■□□□ 1.84
COL13A1-208ENST00000479733 TNNT2P45379 298 aaPredicted RBP26.51■■□□□ 1.83
COL13A1-208ENST00000479733 TBC1D2Q9BYX2 928 aa26.51■■□□□ 1.83
COL13A1-208ENST00000479733 ANTXR1Q9H6X2 564 aa26.51■■□□□ 1.83
COL13A1-208ENST00000479733 L1TD1Q5T7N2 865 aaKnown RBP26.5■■□□□ 1.83
COL13A1-208ENST00000479733 MYO5CQ9NQX4 1742 aa26.5■■□□□ 1.83
COL13A1-208ENST00000479733 LAMC1P11047 1609 aa26.5■■□□□ 1.83
COL13A1-208ENST00000479733 ASXL1Q8IXJ9 1541 aa26.49■■□□□ 1.83
COL13A1-208ENST00000479733 PCDHB15Q9Y5E8 787 aa26.49■■□□□ 1.83
COL13A1-208ENST00000479733 PIK3C2GO75747 1445 aa26.49■■□□□ 1.83
COL13A1-208ENST00000479733 EIF2AK4Q9P2K8 1649 aaKnown RBP26.49■■□□□ 1.83
COL13A1-208ENST00000479733 NUP160Q12769 1436 aa26.49■■□□□ 1.83
COL13A1-208ENST00000479733 WWC1Q8IX03 1113 aa26.49■■□□□ 1.83
COL13A1-208ENST00000479733 SYCP2Q9BX26 1530 aa26.48■■□□□ 1.83
COL13A1-208ENST00000479733 RLBP1P12271 317 aa26.46■■□□□ 1.83
COL13A1-208ENST00000479733 PDZRN3Q9UPQ7 1066 aa26.46■■□□□ 1.83
COL13A1-208ENST00000479733 PANK2Q9BZ23 570 aa26.45■■□□□ 1.82
COL13A1-208ENST00000479733 XRCC6P12956 609 aaKnown RBP eCLIP26.44■■□□□ 1.82
COL13A1-208ENST00000479733 TBC1D32Q96NH3 1257 aa26.44■■□□□ 1.82
COL13A1-208ENST00000479733 CARD14Q9BXL6 1004 aa26.43■■□□□ 1.82
COL13A1-208ENST00000479733 GOLGA6L3A6NEY3 463 aa26.42■■□□□ 1.82
COL13A1-208ENST00000479733 CLASP1Q7Z460 1538 aa26.42■■□□□ 1.82
COL13A1-208ENST00000479733 NLRP1Q9C000 1473 aa26.41■■□□□ 1.82
COL13A1-208ENST00000479733 PMFBP1Q8TBY8 1022 aa26.41■■□□□ 1.82
COL13A1-208ENST00000479733 ARHGAP5Q13017 1502 aa26.41■■□□□ 1.82
COL13A1-208ENST00000479733 RARSP54136 660 aaKnown RBP26.41■■□□□ 1.82
COL13A1-208ENST00000479733 CDC42BPBQ9Y5S2 1711 aa26.4■■□□□ 1.82
COL13A1-208ENST00000479733 NAP1L5Q96NT1 182 aaPredicted RBP26.38■■□□□ 1.81
COL13A1-208ENST00000479733 UNC13BO14795 1591 aa26.38■■□□□ 1.81
COL13A1-208ENST00000479733 SCAF11Q99590 1463 aaKnown RBP26.37■■□□□ 1.81
COL13A1-208ENST00000479733 MCM4P33991 863 aa26.37■■□□□ 1.81
COL13A1-208ENST00000479733 ABCC2Q92887 1545 aa26.36■■□□□ 1.81
COL13A1-208ENST00000479733 MFAP1P55081 439 aaKnown RBP26.36■■□□□ 1.81
COL13A1-208ENST00000479733 CFAP70Q5T0N1 1121 aa26.35■■□□□ 1.81
COL13A1-208ENST00000479733 SYNMO15061 1565 aa26.35■■□□□ 1.81
COL13A1-208ENST00000479733 TCP11L2Q8N4U5 519 aa26.34■■□□□ 1.81
COL13A1-208ENST00000479733 RWDD1Q9H446 243 aaPredicted RBP26.33■■□□□ 1.81
COL13A1-208ENST00000479733 IQGAP3Q86VI3 1631 aa26.32■■□□□ 1.8
COL13A1-208ENST00000479733 RNF17Q9BXT8 1623 aaKnown RBP26.32■■□□□ 1.8
COL13A1-208ENST00000479733 NPC1L1Q9UHC9 1359 aa26.32■■□□□ 1.8
COL13A1-208ENST00000479733 PNNQ9H307 717 aaKnown RBP26.32■■□□□ 1.8
COL13A1-208ENST00000479733 VIRMAQ69YN4 1812 aaKnown RBP26.31■■□□□ 1.8
COL13A1-208ENST00000479733 PREX2Q70Z35 1606 aa26.31■■□□□ 1.8
COL13A1-208ENST00000479733 NINLQ9Y2I6 1382 aa26.31■■□□□ 1.8
COL13A1-208ENST00000479733 ATP10AO60312 1499 aa26.3■■□□□ 1.8
COL13A1-208ENST00000479733 TRAK2O60296 914 aa26.3■■□□□ 1.8
COL13A1-208ENST00000479733 MORC1Q86VD1 984 aa26.29■■□□□ 1.8
COL13A1-208ENST00000479733 C22orf23Q9BZE7 217 aa26.29■■□□□ 1.8
COL13A1-208ENST00000479733 NGEFQ8N5V2 710 aa26.28■■□□□ 1.8
COL13A1-208ENST00000479733 MADDQ8WXG6 1647 aa26.28■■□□□ 1.8
COL13A1-208ENST00000479733 FSD2A1L4K1 749 aa26.28■■□□□ 1.8
COL13A1-208ENST00000479733 RUNDC1Q96C34 613 aa26.27■■□□□ 1.8
COL13A1-208ENST00000479733 IQGAP1P46940 1657 aa26.26■■□□□ 1.79
COL13A1-208ENST00000479733 CHMP5Q9NZZ3 219 aa26.25■■□□□ 1.79
COL13A1-208ENST00000479733 FTSJ3Q8IY81 847 aaKnown RBP26.25■■□□□ 1.79
COL13A1-208ENST00000479733 TTC37Q6PGP7 1564 aa26.24■■□□□ 1.79
COL13A1-208ENST00000479733 MAST1Q9Y2H9 1570 aa26.24■■□□□ 1.79
COL13A1-208ENST00000479733 CHD1O14646 1710 aa26.24■■□□□ 1.79
COL13A1-208ENST00000479733 DUOX2Q9NRD8 1548 aa26.23■■□□□ 1.79
COL13A1-208ENST00000479733 MYOM1P52179 1685 aa26.23■■□□□ 1.79
COL13A1-208ENST00000479733 MVPQ14764 893 aaKnown RBP26.21■■□□□ 1.79
COL13A1-208ENST00000479733 SLC12A5Q9H2X9 1139 aa26.21■■□□□ 1.79
COL13A1-208ENST00000479733 ADGRF5Q8IZF2 1346 aa26.2■■□□□ 1.79
COL13A1-208ENST00000479733 POLR3AO14802 1390 aaPredicted RBP26.2■■□□□ 1.78
COL13A1-208ENST00000479733 AFAP1Q8N556 730 aa26.19■■□□□ 1.78
COL13A1-208ENST00000479733 SCAPERQ9BY12 1400 aa26.19■■□□□ 1.78
COL13A1-208ENST00000479733 CLCN1P35523 988 aa26.19■■□□□ 1.78
COL13A1-208ENST00000479733 MTHFSP49914 203 aa26.19■■□□□ 1.78
COL13A1-208ENST00000479733 TSR2Q969E8 191 aaKnown RBP26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms