RNA–Protein interactions for RNA: ENST00000479389.1

RIPK1-203, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

TSL 3

Gene RIPK1, Length 1,481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-203ENST00000479389 CHGAP10645 457 aaKnown RBP24.69■■□□□ 1.54
RIPK1-203ENST00000479389 HDGFP51858 240 aaKnown RBP24.69■■□□□ 1.54
RIPK1-203ENST00000479389 BCANQ96GW7 911 aa24.69■■□□□ 1.54
RIPK1-203ENST00000479389 RIMS2Q9UQ26 1411 aa24.69■■□□□ 1.54
RIPK1-203ENST00000479389 SPHKAPQ2M3C7 1700 aa24.66■■□□□ 1.54
RIPK1-203ENST00000479389 PPP1R15AO75807 674 aaPredicted RBP24.66■■□□□ 1.54
RIPK1-203ENST00000479389 HSPA1LP34931 641 aa24.66■■□□□ 1.54
RIPK1-203ENST00000479389 KCNA6P17658 529 aa24.65■■□□□ 1.54
RIPK1-203ENST00000479389 PLEKHG1Q9ULL1 1385 aa24.65■■□□□ 1.54
RIPK1-203ENST00000479389 NAIPQ13075 1403 aa24.64■■□□□ 1.54
RIPK1-203ENST00000479389 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.63■■□□□ 1.53
RIPK1-203ENST00000479389 SENP3Q9H4L4 574 aaPredicted RBP24.63■■□□□ 1.53
RIPK1-203ENST00000479389 NWD1Q149M9 1564 aa24.62■■□□□ 1.53
RIPK1-203ENST00000479389 NKTRP30414 1462 aaKnown RBP24.6■■□□□ 1.53
RIPK1-203ENST00000479389 CHD2O14647 1828 aaKnown RBP24.6■■□□□ 1.53
RIPK1-203ENST00000479389 TMEM94Q12767 1356 aa24.59■■□□□ 1.53
RIPK1-203ENST00000479389 PROSER2Q86WR7 435 aaPredicted RBP24.58■■□□□ 1.53
RIPK1-203ENST00000479389 HFM1A2PYH4 1435 aa24.57■■□□□ 1.52
RIPK1-203ENST00000479389 NUTM2DQ5VT03 806 aaPredicted RBP24.57■■□□□ 1.52
RIPK1-203ENST00000479389 DIP2AQ14689 1571 aa24.54■■□□□ 1.52
RIPK1-203ENST00000479389 TBX22Q9Y458 520 aa24.54■■□□□ 1.52
RIPK1-203ENST00000479389 ILDR2Q71H61 639 aa24.52■■□□□ 1.52
RIPK1-203ENST00000479389 RBM33Q96EV2 1170 aaKnown RBP24.52■■□□□ 1.52
RIPK1-203ENST00000479389 TRIM52Q96A61 297 aa24.51■■□□□ 1.51
RIPK1-203ENST00000479389 TRPM2O94759 1503 aa24.51■■□□□ 1.51
RIPK1-203ENST00000479389 CLTCL1P53675 1640 aa24.51■■□□□ 1.51
RIPK1-203ENST00000479389 ADAMTS13Q76LX8 1427 aa24.51■■□□□ 1.51
RIPK1-203ENST00000479389 KIF1BO60333 1816 aa24.5■■□□□ 1.51
RIPK1-203ENST00000479389 MED1Q15648 1581 aaPredicted RBP24.5■■□□□ 1.51
RIPK1-203ENST00000479389 ZNF326Q5BKZ1 582 aaKnown RBP24.48■■□□□ 1.51
RIPK1-203ENST00000479389 MSH6P52701 1360 aa24.47■■□□□ 1.51
RIPK1-203ENST00000479389 PIK3R4Q99570 1358 aa24.46■■□□□ 1.51
RIPK1-203ENST00000479389 FAM135BQ49AJ0 1406 aa24.46■■□□□ 1.51
RIPK1-203ENST00000479389 ROBO1Q9Y6N7 1651 aa24.44■■□□□ 1.5
RIPK1-203ENST00000479389 SLC4A1APQ9BWU0 796 aaKnown RBP24.44■■□□□ 1.5
RIPK1-203ENST00000479389 NRXN3Q9Y4C0 1643 aa24.44■■□□□ 1.5
RIPK1-203ENST00000479389 SETBP1Q9Y6X0 1596 aa24.43■■□□□ 1.5
RIPK1-203ENST00000479389 NEXMIFQ5QGS0 1516 aa24.41■■□□□ 1.5
RIPK1-203ENST00000479389 NCOA3Q9Y6Q9 1424 aa24.41■■□□□ 1.5
RIPK1-203ENST00000479389 C14orf37Q86TY3 774 aa24.38■■□□□ 1.49
RIPK1-203ENST00000479389 AMOTL2Q9Y2J4 779 aa24.38■■□□□ 1.49
RIPK1-203ENST00000479389 PTPRUQ92729 1446 aa24.37■■□□□ 1.49
RIPK1-203ENST00000479389 SLAIN2Q9P270 581 aa24.37■■□□□ 1.49
RIPK1-203ENST00000479389 XRN1Q8IZH2 1706 aaKnown RBP24.36■■□□□ 1.49
RIPK1-203ENST00000479389 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.36■■□□□ 1.49
RIPK1-203ENST00000479389 SOCS7O14512 581 aa24.35■■□□□ 1.49
RIPK1-203ENST00000479389 PHF23Q9BUL5 403 aaPredicted RBP24.33■■□□□ 1.49
RIPK1-203ENST00000479389 C19orf44Q9H6X5 657 aa24.32■■□□□ 1.48
RIPK1-203ENST00000479389 METP08581 1390 aa24.31■■□□□ 1.48
RIPK1-203ENST00000479389 PHLPP1O60346 1717 aa24.31■■□□□ 1.48
RIPK1-203ENST00000479389 FOXD1Q16676 465 aa24.3■■□□□ 1.48
RIPK1-203ENST00000479389 CADPS2Q86UW7 1296 aa24.3■■□□□ 1.48
RIPK1-203ENST00000479389 PPLO60437 1756 aa24.3■■□□□ 1.48
RIPK1-203ENST00000479389 VGFO15240 615 aaPredicted RBP24.29■■□□□ 1.48
RIPK1-203ENST00000479389 ATF3P18847 181 aa24.29■■□□□ 1.48
RIPK1-203ENST00000479389 RPGRIP1LQ68CZ1 1315 aa24.28■■□□□ 1.48
RIPK1-203ENST00000479389 MPHOSPH9Q99550 1183 aa24.27■■□□□ 1.48
RIPK1-203ENST00000479389 CCDC144AA2RUR9 1427 aa24.25■■□□□ 1.47
RIPK1-203ENST00000479389 SETD1AO15047 1707 aaKnown RBP24.25■■□□□ 1.47
RIPK1-203ENST00000479389 ACIN1Q9UKV3 1341 aaKnown RBP24.25■■□□□ 1.47
RIPK1-203ENST00000479389 DCCP43146 1447 aa24.24■■□□□ 1.47
RIPK1-203ENST00000479389 SETD5Q9C0A6 1442 aa24.23■■□□□ 1.47
RIPK1-203ENST00000479389 COL16A1Q07092 1604 aaPredicted RBP24.21■■□□□ 1.47
RIPK1-203ENST00000479389 NALCNQ8IZF0 1738 aa24.19■■□□□ 1.46
RIPK1-203ENST00000479389 AHDC1Q5TGY3 1603 aaPredicted RBP24.18■■□□□ 1.46
RIPK1-203ENST00000479389 ADGRL3Q9HAR2 1447 aa24.18■■□□□ 1.46
RIPK1-203ENST00000479389 IFT172Q9UG01 1749 aa24.18■■□□□ 1.46
RIPK1-203ENST00000479389 JCADQ9P266 1359 aa24.17■■□□□ 1.46
RIPK1-203ENST00000479389 SPATA31E1Q6ZUB1 1445 aa24.16■■□□□ 1.46
RIPK1-203ENST00000479389 PTCH1Q13635 1447 aa24.15■■□□□ 1.46
RIPK1-203ENST00000479389 RGL3Q3MIN7 710 aa24.15■■□□□ 1.46
RIPK1-203ENST00000479389 MST1RQ04912 1400 aa24.15■■□□□ 1.46
RIPK1-203ENST00000479389 BRINP3Q76B58 766 aa24.14■■□□□ 1.46
RIPK1-203ENST00000479389 RAB3GAP2Q9H2M9 1393 aa24.13■■□□□ 1.45
RIPK1-203ENST00000479389 ASXL1Q8IXJ9 1541 aa24.12■■□□□ 1.45
RIPK1-203ENST00000479389 ANKRD30BQ9BXX2 1392 aa24.12■■□□□ 1.45
RIPK1-203ENST00000479389 PRAG1Q86YV5 1406 aa24.12■■□□□ 1.45
RIPK1-203ENST00000479389 ADGRF5Q8IZF2 1346 aa24.11■■□□□ 1.45
RIPK1-203ENST00000479389 ROBO2Q9HCK4 1378 aa24.11■■□□□ 1.45
RIPK1-203ENST00000479389 RGS17Q9UGC6 210 aaPredicted RBP24.11■■□□□ 1.45
RIPK1-203ENST00000479389 SHPRHQ149N8 1683 aa24.1■■□□□ 1.45
RIPK1-203ENST00000479389 NHSL1Q5SYE7 1610 aa24.09■■□□□ 1.45
RIPK1-203ENST00000479389 SPATA31A6Q5VVP1 1343 aa24.06■■□□□ 1.44
RIPK1-203ENST00000479389 PIK3C2GO75747 1445 aa24.03■■□□□ 1.44
RIPK1-203ENST00000479389 C1orf167Q5SNV9 1468 aa24.02■■□□□ 1.44
RIPK1-203ENST00000479389 KNDC1Q76NI1 1749 aa24.01■■□□□ 1.43
RIPK1-203ENST00000479389 LRP6O75581 1613 aa24.01■■□□□ 1.43
RIPK1-203ENST00000479389 POTEAQ6S8J7 498 aa24■■□□□ 1.43
RIPK1-203ENST00000479389 STK26Q9P289 416 aa24■■□□□ 1.43
RIPK1-203ENST00000479389 LRPPRCP42704 1394 aaKnown RBP23.99■■□□□ 1.43
RIPK1-203ENST00000479389 MEX3CQ5U5Q3 659 aaKnown RBP23.99■■□□□ 1.43
RIPK1-203ENST00000479389 TECPR2O15040 1411 aa23.98■■□□□ 1.43
RIPK1-203ENST00000479389 CDC42BPGQ6DT37 1551 aa23.97■■□□□ 1.43
RIPK1-203ENST00000479389 MYOM2P54296 1465 aa23.97■■□□□ 1.43
RIPK1-203ENST00000479389 TMEM132EQ6IEE7 984 aa23.97■■□□□ 1.43
RIPK1-203ENST00000479389 DDX17Q92841 729 aaKnown RBP23.97■■□□□ 1.43
RIPK1-203ENST00000479389 LRRC59Q96AG4 307 aaKnown RBP23.97■■□□□ 1.43
RIPK1-203ENST00000479389 LAMC1P11047 1609 aa23.97■■□□□ 1.43
RIPK1-203ENST00000479389 ABCC11Q96J66 1382 aa23.96■■□□□ 1.43
RIPK1-203ENST00000479389 NRXN1Q9ULB1 1477 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms