RNA–Protein interactions for RNA: ENST00000479295.1

PTPN18-210, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-210ENST00000479295 CPS1P31327 1500 aa14.53□□□□□ -0.08
PTPN18-210ENST00000479295 PLEKHG1Q9ULL1 1385 aa14.52□□□□□ -0.08
PTPN18-210ENST00000479295 FBXO41Q8TF61 875 aa14.52□□□□□ -0.09
PTPN18-210ENST00000479295 HDGFP51858 240 aaKnown RBP14.51□□□□□ -0.09
PTPN18-210ENST00000479295 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.51□□□□□ -0.09
PTPN18-210ENST00000479295 ILDR1Q86SU0 546 aaPredicted RBP14.49□□□□□ -0.09
PTPN18-210ENST00000479295 STRCP1A6NGW2 1772 aa14.49□□□□□ -0.09
PTPN18-210ENST00000479295 NEXMIFQ5QGS0 1516 aa14.48□□□□□ -0.09
PTPN18-210ENST00000479295 ADAMTS13Q76LX8 1427 aa14.48□□□□□ -0.09
PTPN18-210ENST00000479295 KIF1BO60333 1816 aa14.47□□□□□ -0.09
PTPN18-210ENST00000479295 SPATA31E1Q6ZUB1 1445 aa14.47□□□□□ -0.09
PTPN18-210ENST00000479295 NWD1Q149M9 1564 aa14.47□□□□□ -0.09
PTPN18-210ENST00000479295 FOXD1Q16676 465 aa14.46□□□□□ -0.09
PTPN18-210ENST00000479295 TBX22Q9Y458 520 aa14.46□□□□□ -0.09
PTPN18-210ENST00000479295 DIP2AQ14689 1571 aa14.46□□□□□ -0.09
PTPN18-210ENST00000479295 SETBP1Q9Y6X0 1596 aa14.46□□□□□ -0.09
PTPN18-210ENST00000479295 RPGRIP1LQ68CZ1 1315 aa14.45□□□□□ -0.1
PTPN18-210ENST00000479295 CHGAP10645 457 aaKnown RBP14.45□□□□□ -0.1
PTPN18-210ENST00000479295 LRRC7Q96NW7 1537 aa14.45□□□□□ -0.1
PTPN18-210ENST00000479295 PIK3R4Q99570 1358 aa14.45□□□□□ -0.1
PTPN18-210ENST00000479295 NRXN3Q9Y4C0 1643 aa14.44□□□□□ -0.1
PTPN18-210ENST00000479295 CCDC144AA2RUR9 1427 aa14.44□□□□□ -0.1
PTPN18-210ENST00000479295 KCNA6P17658 529 aa14.44□□□□□ -0.1
PTPN18-210ENST00000479295 ANKRD30BQ9BXX2 1392 aa14.43□□□□□ -0.1
PTPN18-210ENST00000479295 SLC26A8Q96RN1 970 aa14.42□□□□□ -0.1
PTPN18-210ENST00000479295 NKTRP30414 1462 aaKnown RBP14.42□□□□□ -0.1
PTPN18-210ENST00000479295 CHD2O14647 1828 aaKnown RBP14.41□□□□□ -0.1
PTPN18-210ENST00000479295 PPP1R15AO75807 674 aaPredicted RBP14.41□□□□□ -0.1
PTPN18-210ENST00000479295 ALKQ9UM73 1620 aa14.4□□□□□ -0.1
PTPN18-210ENST00000479295 PPLO60437 1756 aa14.39□□□□□ -0.11
PTPN18-210ENST00000479295 ZNF326Q5BKZ1 582 aaKnown RBP14.39□□□□□ -0.11
PTPN18-210ENST00000479295 XIRP1Q702N8 1843 aaKnown RBP14.38□□□□□ -0.11
PTPN18-210ENST00000479295 IFT172Q9UG01 1749 aa14.38□□□□□ -0.11
PTPN18-210ENST00000479295 VGFO15240 615 aaPredicted RBP14.38□□□□□ -0.11
PTPN18-210ENST00000479295 NUTM2DQ5VT03 806 aaPredicted RBP14.38□□□□□ -0.11
PTPN18-210ENST00000479295 PRAG1Q86YV5 1406 aa14.37□□□□□ -0.11
PTPN18-210ENST00000479295 PTPRUQ92729 1446 aa14.37□□□□□ -0.11
PTPN18-210ENST00000479295 NCOA3Q9Y6Q9 1424 aa14.37□□□□□ -0.11
PTPN18-210ENST00000479295 SETD1AO15047 1707 aaKnown RBP14.37□□□□□ -0.11
PTPN18-210ENST00000479295 XRN1Q8IZH2 1706 aaKnown RBP14.35□□□□□ -0.11
PTPN18-210ENST00000479295 NRXN1Q9ULB1 1477 aa14.35□□□□□ -0.11
PTPN18-210ENST00000479295 METP08581 1390 aa14.34□□□□□ -0.11
PTPN18-210ENST00000479295 TMEM94Q12767 1356 aa14.34□□□□□ -0.11
PTPN18-210ENST00000479295 MYOM2P54296 1465 aa14.33□□□□□ -0.12
PTPN18-210ENST00000479295 TRIM26Q12899 539 aaPredicted RBP14.33□□□□□ -0.12
PTPN18-210ENST00000479295 BCANQ96GW7 911 aa14.33□□□□□ -0.12
PTPN18-210ENST00000479295 UBAP1LF5GYI3 381 aa14.32□□□□□ -0.12
PTPN18-210ENST00000479295 TOM1O60784 492 aa14.32□□□□□ -0.12
PTPN18-210ENST00000479295 ADGRF5Q8IZF2 1346 aa14.32□□□□□ -0.12
PTPN18-210ENST00000479295 PIK3C2GO75747 1445 aa14.32□□□□□ -0.12
PTPN18-210ENST00000479295 AMOTL2Q9Y2J4 779 aa14.31□□□□□ -0.12
PTPN18-210ENST00000479295 PROSER2Q86WR7 435 aaPredicted RBP14.3□□□□□ -0.12
PTPN18-210ENST00000479295 RGL3Q3MIN7 710 aa14.29□□□□□ -0.12
PTPN18-210ENST00000479295 STAC3Q96MF2 364 aa14.29□□□□□ -0.12
PTPN18-210ENST00000479295 PTCH1Q13635 1447 aa14.28□□□□□ -0.12
PTPN18-210ENST00000479295 DHX57Q6P158 1386 aaKnown RBP14.28□□□□□ -0.12
PTPN18-210ENST00000479295 SENP3Q9H4L4 574 aaPredicted RBP14.28□□□□□ -0.12
PTPN18-210ENST00000479295 ASXL1Q8IXJ9 1541 aa14.26□□□□□ -0.13
PTPN18-210ENST00000479295 TECPR2O15040 1411 aa14.26□□□□□ -0.13
PTPN18-210ENST00000479295 C14orf93Q9H972 538 aaKnown RBP14.26□□□□□ -0.13
PTPN18-210ENST00000479295 FAM135BQ49AJ0 1406 aa14.25□□□□□ -0.13
PTPN18-210ENST00000479295 DCCP43146 1447 aa14.24□□□□□ -0.13
PTPN18-210ENST00000479295 MSH6P52701 1360 aa14.24□□□□□ -0.13
PTPN18-210ENST00000479295 LAMC1P11047 1609 aa14.24□□□□□ -0.13
PTPN18-210ENST00000479295 RBM33Q96EV2 1170 aaKnown RBP14.24□□□□□ -0.13
PTPN18-210ENST00000479295 LRPPRCP42704 1394 aaKnown RBP14.23□□□□□ -0.13
PTPN18-210ENST00000479295 ABCC11Q96J66 1382 aa14.23□□□□□ -0.13
PTPN18-210ENST00000479295 C19orf44Q9H6X5 657 aa14.23□□□□□ -0.13
PTPN18-210ENST00000479295 ROBO2Q9HCK4 1378 aa14.22□□□□□ -0.13
PTPN18-210ENST00000479295 KNDC1Q76NI1 1749 aa14.22□□□□□ -0.13
PTPN18-210ENST00000479295 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.22□□□□□ -0.13
PTPN18-210ENST00000479295 SIRT1Q96EB6 747 aa14.22□□□□□ -0.13
PTPN18-210ENST00000479295 ADGRL3Q9HAR2 1447 aa14.22□□□□□ -0.13
PTPN18-210ENST00000479295 ADGRB1O14514 1584 aa14.21□□□□□ -0.14
PTPN18-210ENST00000479295 YTHDC2Q9H6S0 1430 aaKnown RBP14.19□□□□□ -0.14
PTPN18-210ENST00000479295 CFAP70Q5T0N1 1121 aa14.19□□□□□ -0.14
PTPN18-210ENST00000479295 CADPS2Q86UW7 1296 aa14.19□□□□□ -0.14
PTPN18-210ENST00000479295 HSPA1LP34931 641 aa14.18□□□□□ -0.14
PTPN18-210ENST00000479295 PIP4K2BP78356 416 aa14.18□□□□□ -0.14
PTPN18-210ENST00000479295 DCAF11Q8TEB1 546 aa14.18□□□□□ -0.14
PTPN18-210ENST00000479295 SLAIN2Q9P270 581 aa14.18□□□□□ -0.14
PTPN18-210ENST00000479295 NALCNQ8IZF0 1738 aa14.18□□□□□ -0.14
PTPN18-210ENST00000479295 DLC1Q96QB1 1528 aa14.17□□□□□ -0.14
PTPN18-210ENST00000479295 ROBO1Q9Y6N7 1651 aa14.17□□□□□ -0.14
PTPN18-210ENST00000479295 MST1RQ04912 1400 aa14.16□□□□□ -0.14
PTPN18-210ENST00000479295 TMEM132EQ6IEE7 984 aa14.16□□□□□ -0.14
PTPN18-210ENST00000479295 KIAA1210Q9ULL0 1709 aa14.15□□□□□ -0.14
PTPN18-210ENST00000479295 ATF3P18847 181 aa14.14□□□□□ -0.15
PTPN18-210ENST00000479295 SIN3AQ96ST3 1273 aa14.14□□□□□ -0.15
PTPN18-210ENST00000479295 CDC42BPGQ6DT37 1551 aa14.13□□□□□ -0.15
PTPN18-210ENST00000479295 PLEKHH1Q9ULM0 1364 aa14.12□□□□□ -0.15
PTPN18-210ENST00000479295 C14orf37Q86TY3 774 aa14.12□□□□□ -0.15
PTPN18-210ENST00000479295 L3MBTL2Q969R5 705 aa14.12□□□□□ -0.15
PTPN18-210ENST00000479295 KDM2AQ9Y2K7 1162 aa14.12□□□□□ -0.15
PTPN18-210ENST00000479295 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
PTPN18-210ENST00000479295 AHDC1Q5TGY3 1603 aaPredicted RBP14.12□□□□□ -0.15
PTPN18-210ENST00000479295 C1orf167Q5SNV9 1468 aa14.11□□□□□ -0.15
PTPN18-210ENST00000479295 BRINP3Q76B58 766 aa14.1□□□□□ -0.15
PTPN18-210ENST00000479295 WAPLQ7Z5K2 1190 aa14.1□□□□□ -0.15
PTPN18-210ENST00000479295 STK26Q9P289 416 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms