RNA–Protein interactions for RNA: ENST00000478209.1

PDZRN3-207, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-207ENST00000478209 PPP1R15AO75807 674 aaPredicted RBP24.28■■□□□ 1.48
PDZRN3-207ENST00000478209 TRIM26Q12899 539 aaPredicted RBP24.27■■□□□ 1.48
PDZRN3-207ENST00000478209 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.27■■□□□ 1.48
PDZRN3-207ENST00000478209 ZNF335Q9H4Z2 1342 aaPredicted RBP24.26■■□□□ 1.47
PDZRN3-207ENST00000478209 CCDC144AA2RUR9 1427 aa24.26■■□□□ 1.47
PDZRN3-207ENST00000478209 ZNF326Q5BKZ1 582 aaKnown RBP24.25■■□□□ 1.47
PDZRN3-207ENST00000478209 LTBP4Q8N2S1 1624 aa24.23■■□□□ 1.47
PDZRN3-207ENST00000478209 BCANQ96GW7 911 aa24.22■■□□□ 1.47
PDZRN3-207ENST00000478209 PLEKHG1Q9ULL1 1385 aa24.21■■□□□ 1.47
PDZRN3-207ENST00000478209 CERKQ8TCT0 537 aa24.21■■□□□ 1.47
PDZRN3-207ENST00000478209 NUTM2DQ5VT03 806 aaPredicted RBP24.19■■□□□ 1.46
PDZRN3-207ENST00000478209 CPS1P31327 1500 aa24.15■■□□□ 1.46
PDZRN3-207ENST00000478209 NEXMIFQ5QGS0 1516 aa24.15■■□□□ 1.46
PDZRN3-207ENST00000478209 SLC26A8Q96RN1 970 aa24.15■■□□□ 1.46
PDZRN3-207ENST00000478209 SENP3Q9H4L4 574 aaPredicted RBP24.14■■□□□ 1.45
PDZRN3-207ENST00000478209 RPGRIP1LQ68CZ1 1315 aa24.13■■□□□ 1.45
PDZRN3-207ENST00000478209 ANKRD30BQ9BXX2 1392 aa24.12■■□□□ 1.45
PDZRN3-207ENST00000478209 IQSEC2Q5JU85 1478 aa24.11■■□□□ 1.45
PDZRN3-207ENST00000478209 DIP2AQ14689 1571 aa24.11■■□□□ 1.45
PDZRN3-207ENST00000478209 SPATA31E1Q6ZUB1 1445 aa24.1■■□□□ 1.45
PDZRN3-207ENST00000478209 VGFO15240 615 aaPredicted RBP24.08■■□□□ 1.45
PDZRN3-207ENST00000478209 RGL3Q3MIN7 710 aa24.08■■□□□ 1.45
PDZRN3-207ENST00000478209 TBX22Q9Y458 520 aa24.08■■□□□ 1.45
PDZRN3-207ENST00000478209 STRCP1A6NGW2 1772 aa24.08■■□□□ 1.44
PDZRN3-207ENST00000478209 PPLO60437 1756 aa24.08■■□□□ 1.44
PDZRN3-207ENST00000478209 ADAMTS13Q76LX8 1427 aa24.08■■□□□ 1.44
PDZRN3-207ENST00000478209 SETBP1Q9Y6X0 1596 aa24.07■■□□□ 1.44
PDZRN3-207ENST00000478209 KCNA6P17658 529 aa24.05■■□□□ 1.44
PDZRN3-207ENST00000478209 FBXO41Q8TF61 875 aa24.05■■□□□ 1.44
PDZRN3-207ENST00000478209 NRXN3Q9Y4C0 1643 aa24.03■■□□□ 1.44
PDZRN3-207ENST00000478209 NWD1Q149M9 1564 aa24.03■■□□□ 1.44
PDZRN3-207ENST00000478209 PIK3R4Q99570 1358 aa24.02■■□□□ 1.44
PDZRN3-207ENST00000478209 IFT172Q9UG01 1749 aa24.01■■□□□ 1.43
PDZRN3-207ENST00000478209 LRRC7Q96NW7 1537 aa24.01■■□□□ 1.43
PDZRN3-207ENST00000478209 NKTRP30414 1462 aaKnown RBP24■■□□□ 1.43
PDZRN3-207ENST00000478209 CHD2O14647 1828 aaKnown RBP24■■□□□ 1.43
PDZRN3-207ENST00000478209 ILDR1Q86SU0 546 aaPredicted RBP23.96■■□□□ 1.43
PDZRN3-207ENST00000478209 ADGRF5Q8IZF2 1346 aa23.95■■□□□ 1.42
PDZRN3-207ENST00000478209 PROSER2Q86WR7 435 aaPredicted RBP23.95■■□□□ 1.42
PDZRN3-207ENST00000478209 DHX57Q6P158 1386 aaKnown RBP23.94■■□□□ 1.42
PDZRN3-207ENST00000478209 MYOM2P54296 1465 aa23.94■■□□□ 1.42
PDZRN3-207ENST00000478209 ALKQ9UM73 1620 aa23.93■■□□□ 1.42
PDZRN3-207ENST00000478209 METP08581 1390 aa23.92■■□□□ 1.42
PDZRN3-207ENST00000478209 TMEM94Q12767 1356 aa23.92■■□□□ 1.42
PDZRN3-207ENST00000478209 UBAP1LF5GYI3 381 aa23.92■■□□□ 1.42
PDZRN3-207ENST00000478209 AMOTL2Q9Y2J4 779 aa23.92■■□□□ 1.42
PDZRN3-207ENST00000478209 PTPRUQ92729 1446 aa23.92■■□□□ 1.42
PDZRN3-207ENST00000478209 SETD1AO15047 1707 aaKnown RBP23.9■■□□□ 1.42
PDZRN3-207ENST00000478209 PIK3C2GO75747 1445 aa23.9■■□□□ 1.42
PDZRN3-207ENST00000478209 XRN1Q8IZH2 1706 aaKnown RBP23.9■■□□□ 1.42
PDZRN3-207ENST00000478209 XIRP1Q702N8 1843 aaKnown RBP23.89■■□□□ 1.42
PDZRN3-207ENST00000478209 PCGF6Q9BYE7 350 aa23.89■■□□□ 1.41
PDZRN3-207ENST00000478209 TOM1O60784 492 aa23.88■■□□□ 1.41
PDZRN3-207ENST00000478209 NRXN1Q9ULB1 1477 aa23.87■■□□□ 1.41
PDZRN3-207ENST00000478209 STAC3Q96MF2 364 aa23.87■■□□□ 1.41
PDZRN3-207ENST00000478209 DCAF11Q8TEB1 546 aa23.86■■□□□ 1.41
PDZRN3-207ENST00000478209 RBM33Q96EV2 1170 aaKnown RBP23.85■■□□□ 1.41
PDZRN3-207ENST00000478209 KDM2AQ9Y2K7 1162 aa23.85■■□□□ 1.41
PDZRN3-207ENST00000478209 LAMC1P11047 1609 aa23.84■■□□□ 1.41
PDZRN3-207ENST00000478209 NCOA3Q9Y6Q9 1424 aa23.84■■□□□ 1.41
PDZRN3-207ENST00000478209 MSH6P52701 1360 aa23.83■■□□□ 1.41
PDZRN3-207ENST00000478209 C14orf37Q86TY3 774 aa23.82■■□□□ 1.4
PDZRN3-207ENST00000478209 PTCH1Q13635 1447 aa23.8■■□□□ 1.4
PDZRN3-207ENST00000478209 SIN3AQ96ST3 1273 aa23.8■■□□□ 1.4
PDZRN3-207ENST00000478209 C14orf93Q9H972 538 aaKnown RBP23.8■■□□□ 1.4
PDZRN3-207ENST00000478209 SCAF1Q9H7N4 1312 aaKnown RBP23.8■■□□□ 1.4
PDZRN3-207ENST00000478209 PRAG1Q86YV5 1406 aa23.79■■□□□ 1.4
PDZRN3-207ENST00000478209 PIP4K2BP78356 416 aa23.78■■□□□ 1.4
PDZRN3-207ENST00000478209 NEUROD1Q13562 356 aa23.78■■□□□ 1.4
PDZRN3-207ENST00000478209 CFAP70Q5T0N1 1121 aa23.78■■□□□ 1.4
PDZRN3-207ENST00000478209 ASXL1Q8IXJ9 1541 aa23.78■■□□□ 1.4
PDZRN3-207ENST00000478209 LRPPRCP42704 1394 aaKnown RBP23.77■■□□□ 1.4
PDZRN3-207ENST00000478209 TMEM132EQ6IEE7 984 aa23.76■■□□□ 1.39
PDZRN3-207ENST00000478209 C19orf44Q9H6X5 657 aa23.74■■□□□ 1.39
PDZRN3-207ENST00000478209 STK26Q9P289 416 aa23.74■■□□□ 1.39
PDZRN3-207ENST00000478209 ROBO2Q9HCK4 1378 aa23.74■■□□□ 1.39
PDZRN3-207ENST00000478209 YTHDC2Q9H6S0 1430 aaKnown RBP23.74■■□□□ 1.39
PDZRN3-207ENST00000478209 KNDC1Q76NI1 1749 aa23.73■■□□□ 1.39
PDZRN3-207ENST00000478209 TECPR2O15040 1411 aa23.73■■□□□ 1.39
PDZRN3-207ENST00000478209 ABCC11Q96J66 1382 aa23.72■■□□□ 1.39
PDZRN3-207ENST00000478209 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.71■■□□□ 1.39
PDZRN3-207ENST00000478209 ADGRL3Q9HAR2 1447 aa23.71■■□□□ 1.39
PDZRN3-207ENST00000478209 ATF3P18847 181 aa23.71■■□□□ 1.39
PDZRN3-207ENST00000478209 L3MBTL2Q969R5 705 aa23.71■■□□□ 1.39
PDZRN3-207ENST00000478209 DCCP43146 1447 aa23.7■■□□□ 1.38
PDZRN3-207ENST00000478209 CADPS2Q86UW7 1296 aa23.7■■□□□ 1.38
PDZRN3-207ENST00000478209 NALCNQ8IZF0 1738 aa23.68■■□□□ 1.38
PDZRN3-207ENST00000478209 ADGRB1O14514 1584 aa23.68■■□□□ 1.38
PDZRN3-207ENST00000478209 TONSLQ96HA7 1378 aa23.66■■□□□ 1.38
PDZRN3-207ENST00000478209 KIAA1210Q9ULL0 1709 aa23.66■■□□□ 1.38
PDZRN3-207ENST00000478209 SLAIN2Q9P270 581 aa23.65■■□□□ 1.38
PDZRN3-207ENST00000478209 FAM135BQ49AJ0 1406 aa23.65■■□□□ 1.38
PDZRN3-207ENST00000478209 SIRT1Q96EB6 747 aa23.63■■□□□ 1.37
PDZRN3-207ENST00000478209 DLC1Q96QB1 1528 aa23.63■■□□□ 1.37
PDZRN3-207ENST00000478209 WAPLQ7Z5K2 1190 aa23.62■■□□□ 1.37
PDZRN3-207ENST00000478209 ROBO1Q9Y6N7 1651 aa23.61■■□□□ 1.37
PDZRN3-207ENST00000478209 HSPA1LP34931 641 aa23.6■■□□□ 1.37
PDZRN3-207ENST00000478209 PLEKHH1Q9ULM0 1364 aa23.6■■□□□ 1.37
PDZRN3-207ENST00000478209 CLSPNQ9HAW4 1339 aa23.59■■□□□ 1.37
PDZRN3-207ENST00000478209 POGKQ9P215 609 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms