RNA–Protein interactions for RNA: ENST00000478082.5

PLOD3-212, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 1,585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-212ENST00000478082 ZNF335Q9H4Z2 1342 aaPredicted RBP27.68■■■□□ 2.02
PLOD3-212ENST00000478082 ACIN1Q9UKV3 1341 aaKnown RBP27.67■■■□□ 2.02
PLOD3-212ENST00000478082 LTBP4Q8N2S1 1624 aa27.64■■■□□ 2.01
PLOD3-212ENST00000478082 KIF1BO60333 1816 aa27.62■■■□□ 2.01
PLOD3-212ENST00000478082 ZNF326Q5BKZ1 582 aaKnown RBP27.6■■■□□ 2.01
PLOD3-212ENST00000478082 CCDC144AA2RUR9 1427 aa27.6■■■□□ 2.01
PLOD3-212ENST00000478082 PPP1R15AO75807 674 aaPredicted RBP27.58■■■□□ 2.01
PLOD3-212ENST00000478082 SLC26A8Q96RN1 970 aa27.57■■■□□ 2
PLOD3-212ENST00000478082 NEXMIFQ5QGS0 1516 aa27.57■■■□□ 2
PLOD3-212ENST00000478082 PLEKHG1Q9ULL1 1385 aa27.56■■■□□ 2
PLOD3-212ENST00000478082 ANKRD30BQ9BXX2 1392 aa27.55■■■□□ 2
PLOD3-212ENST00000478082 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.54■■■□□ 2
PLOD3-212ENST00000478082 CERKQ8TCT0 537 aa27.54■■■□□ 2
PLOD3-212ENST00000478082 STRCP1A6NGW2 1772 aa27.54■■■□□ 2
PLOD3-212ENST00000478082 BCANQ96GW7 911 aa27.53■■■□□ 2
PLOD3-212ENST00000478082 SPATA31E1Q6ZUB1 1445 aa27.52■■■□□ 2
PLOD3-212ENST00000478082 HDGFP51858 240 aaKnown RBP27.52■■■□□ 2
PLOD3-212ENST00000478082 RGL3Q3MIN7 710 aa27.5■■□□□ 1.99
PLOD3-212ENST00000478082 ADAMTS13Q76LX8 1427 aa27.49■■□□□ 1.99
PLOD3-212ENST00000478082 NRXN3Q9Y4C0 1643 aa27.47■■□□□ 1.99
PLOD3-212ENST00000478082 PPLO60437 1756 aa27.45■■□□□ 1.99
PLOD3-212ENST00000478082 CPS1P31327 1500 aa27.42■■□□□ 1.98
PLOD3-212ENST00000478082 SETBP1Q9Y6X0 1596 aa27.41■■□□□ 1.98
PLOD3-212ENST00000478082 RPGRIP1LQ68CZ1 1315 aa27.4■■□□□ 1.98
PLOD3-212ENST00000478082 IFT172Q9UG01 1749 aa27.4■■□□□ 1.98
PLOD3-212ENST00000478082 TBX22Q9Y458 520 aa27.39■■□□□ 1.98
PLOD3-212ENST00000478082 LRRC7Q96NW7 1537 aa27.38■■□□□ 1.97
PLOD3-212ENST00000478082 DHX57Q6P158 1386 aaKnown RBP27.38■■□□□ 1.97
PLOD3-212ENST00000478082 ADGRF5Q8IZF2 1346 aa27.37■■□□□ 1.97
PLOD3-212ENST00000478082 DIP2AQ14689 1571 aa27.37■■□□□ 1.97
PLOD3-212ENST00000478082 PCGF6Q9BYE7 350 aa27.37■■□□□ 1.97
PLOD3-212ENST00000478082 VGFO15240 615 aaPredicted RBP27.36■■□□□ 1.97
PLOD3-212ENST00000478082 KCNA6P17658 529 aa27.36■■□□□ 1.97
PLOD3-212ENST00000478082 NWD1Q149M9 1564 aa27.36■■□□□ 1.97
PLOD3-212ENST00000478082 PTPRUQ92729 1446 aa27.35■■□□□ 1.97
PLOD3-212ENST00000478082 RBM33Q96EV2 1170 aaKnown RBP27.35■■□□□ 1.97
PLOD3-212ENST00000478082 CHD2O14647 1828 aaKnown RBP27.34■■□□□ 1.97
PLOD3-212ENST00000478082 METP08581 1390 aa27.34■■□□□ 1.97
PLOD3-212ENST00000478082 ILDR1Q86SU0 546 aaPredicted RBP27.34■■□□□ 1.97
PLOD3-212ENST00000478082 IQSEC2Q5JU85 1478 aa27.32■■□□□ 1.96
PLOD3-212ENST00000478082 SETD1AO15047 1707 aaKnown RBP27.31■■□□□ 1.96
PLOD3-212ENST00000478082 FBXO41Q8TF61 875 aa27.31■■□□□ 1.96
PLOD3-212ENST00000478082 XIRP1Q702N8 1843 aaKnown RBP27.31■■□□□ 1.96
PLOD3-212ENST00000478082 ALKQ9UM73 1620 aa27.3■■□□□ 1.96
PLOD3-212ENST00000478082 SIN3AQ96ST3 1273 aa27.27■■□□□ 1.96
PLOD3-212ENST00000478082 AMOTL2Q9Y2J4 779 aa27.26■■□□□ 1.96
PLOD3-212ENST00000478082 TMEM94Q12767 1356 aa27.26■■□□□ 1.96
PLOD3-212ENST00000478082 PIK3R4Q99570 1358 aa27.26■■□□□ 1.96
PLOD3-212ENST00000478082 NKTRP30414 1462 aaKnown RBP27.26■■□□□ 1.95
PLOD3-212ENST00000478082 PIK3C2GO75747 1445 aa27.26■■□□□ 1.95
PLOD3-212ENST00000478082 MYOM2P54296 1465 aa27.25■■□□□ 1.95
PLOD3-212ENST00000478082 PROSER2Q86WR7 435 aaPredicted RBP27.25■■□□□ 1.95
PLOD3-212ENST00000478082 XRN1Q8IZH2 1706 aaKnown RBP27.24■■□□□ 1.95
PLOD3-212ENST00000478082 NRXN1Q9ULB1 1477 aa27.23■■□□□ 1.95
PLOD3-212ENST00000478082 DCAF11Q8TEB1 546 aa27.23■■□□□ 1.95
PLOD3-212ENST00000478082 KDM2AQ9Y2K7 1162 aa27.23■■□□□ 1.95
PLOD3-212ENST00000478082 UBAP1LF5GYI3 381 aa27.21■■□□□ 1.95
PLOD3-212ENST00000478082 ASXL1Q8IXJ9 1541 aa27.2■■□□□ 1.95
PLOD3-212ENST00000478082 NEUROD1Q13562 356 aa27.18■■□□□ 1.94
PLOD3-212ENST00000478082 CFAP70Q5T0N1 1121 aa27.17■■□□□ 1.94
PLOD3-212ENST00000478082 TMEM132EQ6IEE7 984 aa27.17■■□□□ 1.94
PLOD3-212ENST00000478082 C14orf93Q9H972 538 aaKnown RBP27.14■■□□□ 1.93
PLOD3-212ENST00000478082 ROBO2Q9HCK4 1378 aa27.12■■□□□ 1.93
PLOD3-212ENST00000478082 PIP4K2BP78356 416 aa27.11■■□□□ 1.93
PLOD3-212ENST00000478082 STK26Q9P289 416 aa27.1■■□□□ 1.93
PLOD3-212ENST00000478082 TOM1O60784 492 aa27.09■■□□□ 1.93
PLOD3-212ENST00000478082 L3MBTL2Q969R5 705 aa27.09■■□□□ 1.93
PLOD3-212ENST00000478082 SCAF1Q9H7N4 1312 aaKnown RBP27.08■■□□□ 1.93
PLOD3-212ENST00000478082 LAMC1P11047 1609 aa27.07■■□□□ 1.92
PLOD3-212ENST00000478082 C14orf37Q86TY3 774 aa27.07■■□□□ 1.92
PLOD3-212ENST00000478082 PTCH1Q13635 1447 aa27.07■■□□□ 1.92
PLOD3-212ENST00000478082 MSH6P52701 1360 aa27.06■■□□□ 1.92
PLOD3-212ENST00000478082 LRPPRCP42704 1394 aaKnown RBP27.05■■□□□ 1.92
PLOD3-212ENST00000478082 PRAG1Q86YV5 1406 aa27.05■■□□□ 1.92
PLOD3-212ENST00000478082 YTHDC2Q9H6S0 1430 aaKnown RBP27.05■■□□□ 1.92
PLOD3-212ENST00000478082 NCOA3Q9Y6Q9 1424 aa27.05■■□□□ 1.92
PLOD3-212ENST00000478082 ADGRB1O14514 1584 aa27.05■■□□□ 1.92
PLOD3-212ENST00000478082 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.04■■□□□ 1.92
PLOD3-212ENST00000478082 NALCNQ8IZF0 1738 aa27.03■■□□□ 1.92
PLOD3-212ENST00000478082 TECPR2O15040 1411 aa27.02■■□□□ 1.92
PLOD3-212ENST00000478082 PLEKHH1Q9ULM0 1364 aa27.02■■□□□ 1.92
PLOD3-212ENST00000478082 STAC3Q96MF2 364 aa27.01■■□□□ 1.92
PLOD3-212ENST00000478082 WAPLQ7Z5K2 1190 aa27.01■■□□□ 1.91
PLOD3-212ENST00000478082 KNDC1Q76NI1 1749 aa27■■□□□ 1.91
PLOD3-212ENST00000478082 ABCC11Q96J66 1382 aa27■■□□□ 1.91
PLOD3-212ENST00000478082 C19orf44Q9H6X5 657 aa27■■□□□ 1.91
PLOD3-212ENST00000478082 ADGRL3Q9HAR2 1447 aa26.98■■□□□ 1.91
PLOD3-212ENST00000478082 NBPF1Q3BBV0 1214 aa26.95■■□□□ 1.9
PLOD3-212ENST00000478082 SLAIN2Q9P270 581 aa26.93■■□□□ 1.9
PLOD3-212ENST00000478082 TRAK1Q9UPV9 953 aa26.93■■□□□ 1.9
PLOD3-212ENST00000478082 ATF3P18847 181 aa26.92■■□□□ 1.9
PLOD3-212ENST00000478082 TONSLQ96HA7 1378 aa26.92■■□□□ 1.9
PLOD3-212ENST00000478082 HSPA1LP34931 641 aa26.92■■□□□ 1.9
PLOD3-212ENST00000478082 CADPS2Q86UW7 1296 aa26.92■■□□□ 1.9
PLOD3-212ENST00000478082 ROBO1Q9Y6N7 1651 aa26.91■■□□□ 1.9
PLOD3-212ENST00000478082 DCCP43146 1447 aa26.91■■□□□ 1.9
PLOD3-212ENST00000478082 KIAA1210Q9ULL0 1709 aa26.91■■□□□ 1.9
PLOD3-212ENST00000478082 SAFB2Q14151 953 aaKnown RBP eCLIP26.9■■□□□ 1.9
PLOD3-212ENST00000478082 NBPF8Q3BBV2 869 aa26.9■■□□□ 1.9
PLOD3-212ENST00000478082 PRAM1Q96QH2 718 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms