RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 CEP170BQ9Y4F5 1589 aaPredicted RBP19.02■□□□□ 0.64
LMNA-214ENST00000478063 PRAG1Q86YV5 1406 aa19.02■□□□□ 0.64
LMNA-214ENST00000478063 NBPF8Q3BBV2 869 aa19.02■□□□□ 0.64
LMNA-214ENST00000478063 KIAA1210Q9ULL0 1709 aa19.02■□□□□ 0.63
LMNA-214ENST00000478063 RPGRIP1LQ68CZ1 1315 aa19■□□□□ 0.63
LMNA-214ENST00000478063 RALGAPBQ86X10 1494 aa18.99■□□□□ 0.63
LMNA-214ENST00000478063 STAC3Q96MF2 364 aa18.99■□□□□ 0.63
LMNA-214ENST00000478063 NRXN1Q9ULB1 1477 aa18.97■□□□□ 0.63
LMNA-214ENST00000478063 LAMC1P11047 1609 aa18.96■□□□□ 0.63
LMNA-214ENST00000478063 RIMS2Q9UQ26 1411 aa18.96■□□□□ 0.63
LMNA-214ENST00000478063 KDM4FA0A1W2PPD8 638 aa18.94■□□□□ 0.62
LMNA-214ENST00000478063 ADGRF5Q8IZF2 1346 aa18.94■□□□□ 0.62
LMNA-214ENST00000478063 ZFYVE9O95405 1425 aa18.93■□□□□ 0.62
LMNA-214ENST00000478063 NUTM2DQ5VT03 806 aaPredicted RBP18.93■□□□□ 0.62
LMNA-214ENST00000478063 PIK3C2GO75747 1445 aa18.92■□□□□ 0.62
LMNA-214ENST00000478063 IQGAP1P46940 1657 aa18.92■□□□□ 0.62
LMNA-214ENST00000478063 VGFO15240 615 aaPredicted RBP18.92■□□□□ 0.62
LMNA-214ENST00000478063 SLIT1O75093 1534 aa18.91■□□□□ 0.62
LMNA-214ENST00000478063 ROCK2O75116 1388 aaKnown RBP18.91■□□□□ 0.62
LMNA-214ENST00000478063 TMEM2Q9UHN6 1383 aa18.91■□□□□ 0.62
LMNA-214ENST00000478063 POLR1AO95602 1720 aaPredicted RBP18.89■□□□□ 0.61
LMNA-214ENST00000478063 ARHGAP23Q9P227 1491 aa18.89■□□□□ 0.61
LMNA-214ENST00000478063 SETD1AO15047 1707 aaKnown RBP18.88■□□□□ 0.61
LMNA-214ENST00000478063 THEMISQ8N1K5 641 aaPredicted RBP18.88■□□□□ 0.61
LMNA-214ENST00000478063 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.88■□□□□ 0.61
LMNA-214ENST00000478063 SETBP1Q9Y6X0 1596 aa18.88■□□□□ 0.61
LMNA-214ENST00000478063 NRXN3Q9Y4C0 1643 aa18.88■□□□□ 0.61
LMNA-214ENST00000478063 HDGFP51858 240 aaKnown RBP18.87■□□□□ 0.61
LMNA-214ENST00000478063 ALKQ9UM73 1620 aa18.85■□□□□ 0.61
LMNA-214ENST00000478063 GPRASP1Q5JY77 1395 aa18.85■□□□□ 0.61
LMNA-214ENST00000478063 NBPF1Q3BBV0 1214 aa18.85■□□□□ 0.61
LMNA-214ENST00000478063 CARD11Q9BXL7 1154 aa18.85■□□□□ 0.61
LMNA-214ENST00000478063 SENP3Q9H4L4 574 aaPredicted RBP18.85■□□□□ 0.61
LMNA-214ENST00000478063 CFAP70Q5T0N1 1121 aa18.84■□□□□ 0.61
LMNA-214ENST00000478063 EIF4G2P78344 907 aaKnown RBP eCLIP18.83■□□□□ 0.6
LMNA-214ENST00000478063 EID1Q9Y6B2 187 aa18.83■□□□□ 0.6
LMNA-214ENST00000478063 SCAF11Q99590 1463 aaKnown RBP18.83■□□□□ 0.6
LMNA-214ENST00000478063 USP47Q96K76 1375 aa18.82■□□□□ 0.6
LMNA-214ENST00000478063 ADGRB1O14514 1584 aa18.82■□□□□ 0.6
LMNA-214ENST00000478063 ASXL1Q8IXJ9 1541 aa18.81■□□□□ 0.6
LMNA-214ENST00000478063 ZNF316A6NFI3 1004 aaPredicted RBP18.81■□□□□ 0.6
LMNA-214ENST00000478063 TXNDC2Q86VQ3 553 aa18.81■□□□□ 0.6
LMNA-214ENST00000478063 C14orf93Q9H972 538 aaKnown RBP18.81■□□□□ 0.6
LMNA-214ENST00000478063 ARHGEF28Q8N1W1 1705 aaKnown RBP18.8■□□□□ 0.6
LMNA-214ENST00000478063 HSPA5P11021 654 aaKnown RBP18.8■□□□□ 0.6
LMNA-214ENST00000478063 PLEKHG1Q9ULL1 1385 aa18.8■□□□□ 0.6
LMNA-214ENST00000478063 LTKP29376 864 aa18.79■□□□□ 0.6
LMNA-214ENST00000478063 BCANQ96GW7 911 aa18.79■□□□□ 0.6
LMNA-214ENST00000478063 HIRIP3Q9BW71 556 aaPredicted RBP18.79■□□□□ 0.6
LMNA-214ENST00000478063 DIP2AQ14689 1571 aa18.76■□□□□ 0.59
LMNA-214ENST00000478063 QRICH2Q9H0J4 1663 aa18.76■□□□□ 0.59
LMNA-214ENST00000478063 KNDC1Q76NI1 1749 aa18.75■□□□□ 0.59
LMNA-214ENST00000478063 LMTK3Q96Q04 1460 aa18.74■□□□□ 0.59
LMNA-214ENST00000478063 EIF3AQ14152 1382 aaKnown RBP18.74■□□□□ 0.59
LMNA-214ENST00000478063 TMEM132EQ6IEE7 984 aa18.74■□□□□ 0.59
LMNA-214ENST00000478063 ANKLE2Q86XL3 938 aa18.74■□□□□ 0.59
LMNA-214ENST00000478063 ADAMTS13Q76LX8 1427 aa18.74■□□□□ 0.59
LMNA-214ENST00000478063 YTHDC2Q9H6S0 1430 aaKnown RBP18.71■□□□□ 0.59
LMNA-214ENST00000478063 MED14O60244 1454 aa18.71■□□□□ 0.59
LMNA-214ENST00000478063 ST20-MTHFSA0A0A6YYL1 179 aa18.7■□□□□ 0.58
LMNA-214ENST00000478063 STRCQ7RTU9 1775 aa18.69■□□□□ 0.58
LMNA-214ENST00000478063 TRAK1Q9UPV9 953 aa18.69■□□□□ 0.58
LMNA-214ENST00000478063 CHD2O14647 1828 aaKnown RBP18.69■□□□□ 0.58
LMNA-214ENST00000478063 METP08581 1390 aa18.68■□□□□ 0.58
LMNA-214ENST00000478063 NPHP4O75161 1426 aaPredicted RBP18.68■□□□□ 0.58
LMNA-214ENST00000478063 SLC26A8Q96RN1 970 aa18.68■□□□□ 0.58
LMNA-214ENST00000478063 HSPA2P54652 639 aa18.67■□□□□ 0.58
LMNA-214ENST00000478063 STK26Q9P289 416 aa18.67■□□□□ 0.58
LMNA-214ENST00000478063 DLC1Q96QB1 1528 aa18.67■□□□□ 0.58
LMNA-214ENST00000478063 NCKAP5LQ9HCH0 1330 aa18.67■□□□□ 0.58
LMNA-214ENST00000478063 CPS1P31327 1500 aa18.66■□□□□ 0.58
LMNA-214ENST00000478063 LRPPRCP42704 1394 aaKnown RBP18.66■□□□□ 0.58
LMNA-214ENST00000478063 XRN1Q8IZH2 1706 aaKnown RBP18.66■□□□□ 0.58
LMNA-214ENST00000478063 TBX22Q9Y458 520 aa18.64■□□□□ 0.57
LMNA-214ENST00000478063 CENPJQ9HC77 1338 aaPredicted RBP18.63■□□□□ 0.57
LMNA-214ENST00000478063 TECPR2O15040 1411 aa18.61■□□□□ 0.57
LMNA-214ENST00000478063 ABCC11Q96J66 1382 aa18.61■□□□□ 0.57
LMNA-214ENST00000478063 PTPRUQ92729 1446 aa18.6■□□□□ 0.57
LMNA-214ENST00000478063 TESK2Q96S53 571 aa18.6■□□□□ 0.57
LMNA-214ENST00000478063 CCDC7Q96M83 1385 aa18.59■□□□□ 0.57
LMNA-214ENST00000478063 PIK3R4Q99570 1358 aa18.59■□□□□ 0.57
LMNA-214ENST00000478063 SBNO2Q9Y2G9 1366 aa18.59■□□□□ 0.57
LMNA-214ENST00000478063 WASHC2AQ641Q2 1341 aa18.59■□□□□ 0.57
LMNA-214ENST00000478063 C11orf95C9JLR9 678 aaPredicted RBP18.59■□□□□ 0.57
LMNA-214ENST00000478063 DISP3Q9P2K9 1392 aa18.58■□□□□ 0.57
LMNA-214ENST00000478063 TMF1P82094 1093 aa18.58■□□□□ 0.56
LMNA-214ENST00000478063 PRAM1Q96QH2 718 aa18.58■□□□□ 0.56
LMNA-214ENST00000478063 POGKQ9P215 609 aa18.58■□□□□ 0.56
LMNA-214ENST00000478063 KIF7Q2M1P5 1343 aa18.57■□□□□ 0.56
LMNA-214ENST00000478063 NWD1Q149M9 1564 aa18.57■□□□□ 0.56
LMNA-214ENST00000478063 SAFB2Q14151 953 aaKnown RBP eCLIP18.57■□□□□ 0.56
LMNA-214ENST00000478063 POLR3GLQ9BT43 218 aa18.57■□□□□ 0.56
LMNA-214ENST00000478063 FAM135BQ49AJ0 1406 aa18.57■□□□□ 0.56
LMNA-214ENST00000478063 AMOTL2Q9Y2J4 779 aa18.55■□□□□ 0.56
LMNA-214ENST00000478063 PTCH1Q13635 1447 aa18.55■□□□□ 0.56
LMNA-214ENST00000478063 STRCP1A6NGW2 1772 aa18.55■□□□□ 0.56
LMNA-214ENST00000478063 PLEKHH1Q9ULM0 1364 aa18.55■□□□□ 0.56
LMNA-214ENST00000478063 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.54■□□□□ 0.56
LMNA-214ENST00000478063 TULP4Q9NRJ4 1543 aa18.54■□□□□ 0.56
LMNA-214ENST00000478063 MYOM1P52179 1685 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms