RNA–Protein interactions for RNA: ENST00000477664.1

DCLK1-206, Transcript of doublecortin like kinase 1, humanhuman

TSL 5

Gene DCLK1, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-206ENST00000477664 ZNF608Q9ULD9 1512 aaPredicted RBP7.52□□□□□ -1.2
DCLK1-206ENST00000477664 TRIM6-TRIM34B2RNG4 842 aa7.52□□□□□ -1.21
DCLK1-206ENST00000477664 PDE4AP27815 886 aa7.52□□□□□ -1.21
DCLK1-206ENST00000477664 PHF14O94880 888 aa7.51□□□□□ -1.21
DCLK1-206ENST00000477664 PPP4CP60510 307 aa7.51□□□□□ -1.21
DCLK1-206ENST00000477664 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.51□□□□□ -1.21
DCLK1-206ENST00000477664 ABCA5Q8WWZ7 1642 aa7.51□□□□□ -1.21
DCLK1-206ENST00000477664 C6orf132Q5T0Z8 1188 aa7.49□□□□□ -1.21
DCLK1-206ENST00000477664 HS6ST3Q8IZP7 471 aa7.49□□□□□ -1.21
DCLK1-206ENST00000477664 MTRQ99707 1265 aa7.49□□□□□ -1.21
DCLK1-206ENST00000477664 IL21Q9HBE4 155 aa7.49□□□□□ -1.21
DCLK1-206ENST00000477664 MAGI1Q96QZ7 1491 aaPredicted RBP7.49□□□□□ -1.21
DCLK1-206ENST00000477664 CUL7Q14999 1698 aa7.48□□□□□ -1.21
DCLK1-206ENST00000477664 POTECB2RU33 542 aa7.48□□□□□ -1.21
DCLK1-206ENST00000477664 CEP162Q5TB80 1403 aa7.48□□□□□ -1.21
DCLK1-206ENST00000477664 CLIP1P30622 1438 aa7.47□□□□□ -1.21
DCLK1-206ENST00000477664 RANGAP1P46060 587 aaPredicted RBP7.47□□□□□ -1.21
DCLK1-206ENST00000477664 ZNF516Q92618 1163 aa7.47□□□□□ -1.21
DCLK1-206ENST00000477664 LARP6Q9BRS8 491 aaKnown RBP7.46□□□□□ -1.22
DCLK1-206ENST00000477664 EMILIN3Q9NT22 766 aa7.46□□□□□ -1.22
DCLK1-206ENST00000477664 SNAPC4Q5SXM2 1469 aa7.46□□□□□ -1.22
DCLK1-206ENST00000477664 SYNJ2O15056 1496 aa7.45□□□□□ -1.22
DCLK1-206ENST00000477664 TREML4Q6UXN2 200 aa7.45□□□□□ -1.22
DCLK1-206ENST00000477664 EIF4G3O43432 1585 aaKnown RBP7.45□□□□□ -1.22
DCLK1-206ENST00000477664 MYT1Q01538 1121 aa7.44□□□□□ -1.22
DCLK1-206ENST00000477664 DDX27Q96GQ7 796 aaKnown RBP7.44□□□□□ -1.22
DCLK1-206ENST00000477664 NKX1-1Q15270 411 aaPredicted RBP7.43□□□□□ -1.22
DCLK1-206ENST00000477664 LCE2AQ5TA79 106 aaPredicted RBP7.43□□□□□ -1.22
DCLK1-206ENST00000477664 TRIM67Q6ZTA4 783 aa7.43□□□□□ -1.22
DCLK1-206ENST00000477664 NKX2-3Q8TAU0 364 aa7.43□□□□□ -1.22
DCLK1-206ENST00000477664 EPAS1Q99814 870 aa7.43□□□□□ -1.22
DCLK1-206ENST00000477664 GRIN2AQ12879 1464 aa7.43□□□□□ -1.22
DCLK1-206ENST00000477664 ADAMTS12P58397 1594 aa7.42□□□□□ -1.22
DCLK1-206ENST00000477664 PBRM1Q86U86 1689 aa7.42□□□□□ -1.22
DCLK1-206ENST00000477664 SAMD7Q7Z3H4 446 aa7.42□□□□□ -1.22
DCLK1-206ENST00000477664 KIAA0586Q9BVV6 1533 aa7.42□□□□□ -1.22
DCLK1-206ENST00000477664 PKDCCQ504Y2 493 aa7.41□□□□□ -1.22
DCLK1-206ENST00000477664 PACS2Q86VP3 889 aa7.41□□□□□ -1.22
DCLK1-206ENST00000477664 P3H3Q8IVL6 736 aa7.41□□□□□ -1.22
DCLK1-206ENST00000477664 TSKSQ9UJT2 592 aa7.41□□□□□ -1.22
DCLK1-206ENST00000477664 MFSD10Q14728 455 aa7.4□□□□□ -1.22
DCLK1-206ENST00000477664 RBM33Q96EV2 1170 aaKnown RBP7.4□□□□□ -1.22
DCLK1-206ENST00000477664 RYDENQ9NUL5 291 aaKnown RBP7.4□□□□□ -1.22
DCLK1-206ENST00000477664 NUP160Q12769 1436 aa7.39□□□□□ -1.23
DCLK1-206ENST00000477664 DGAT1O75907 488 aa7.39□□□□□ -1.23
DCLK1-206ENST00000477664 CHGAP10645 457 aaKnown RBP7.39□□□□□ -1.23
DCLK1-206ENST00000477664 ARHGAP35Q9NRY4 1499 aa7.38□□□□□ -1.23
DCLK1-206ENST00000477664 VPS8Q8N3P4 1428 aa7.38□□□□□ -1.23
DCLK1-206ENST00000477664 GGCXP38435 758 aa7.38□□□□□ -1.23
DCLK1-206ENST00000477664 SMAPO00193 183 aa7.37□□□□□ -1.23
DCLK1-206ENST00000477664 TMUB1Q9BVT8 246 aa7.37□□□□□ -1.23
DCLK1-206ENST00000477664 DNAJC5Q9H3Z4 198 aa7.37□□□□□ -1.23
DCLK1-206ENST00000477664 EFCAB5A4FU69 1503 aa7.37□□□□□ -1.23
DCLK1-206ENST00000477664 CARMIL2Q6F5E8 1435 aa7.36□□□□□ -1.23
DCLK1-206ENST00000477664 IQGAP2Q13576 1575 aa7.35□□□□□ -1.23
DCLK1-206ENST00000477664 SLC19A1P41440 591 aa7.35□□□□□ -1.23
DCLK1-206ENST00000477664 APLP1P51693 650 aa7.35□□□□□ -1.23
DCLK1-206ENST00000477664 ATP1B4Q9UN42 357 aaPredicted RBP7.35□□□□□ -1.23
DCLK1-206ENST00000477664 UGGT2Q9NYU1 1516 aa7.35□□□□□ -1.23
DCLK1-206ENST00000477664 ARAP1Q96P48 1450 aa7.35□□□□□ -1.23
DCLK1-206ENST00000477664 FMN1Q68DA7 1419 aa7.35□□□□□ -1.23
DCLK1-206ENST00000477664 EMID1Q96A84 441 aaPredicted RBP7.34□□□□□ -1.23
DCLK1-206ENST00000477664 STK17AQ9UEE5 414 aa7.34□□□□□ -1.23
DCLK1-206ENST00000477664 CEP170Q5SW79 1584 aa7.33□□□□□ -1.24
DCLK1-206ENST00000477664 CTTNBP2Q8WZ74 1663 aa7.33□□□□□ -1.24
DCLK1-206ENST00000477664 TRIM26Q12899 539 aaPredicted RBP7.33□□□□□ -1.24
DCLK1-206ENST00000477664 FHOD3Q2V2M9 1422 aa7.33□□□□□ -1.24
DCLK1-206ENST00000477664 PRR20EP86478 221 aa7.32□□□□□ -1.24
DCLK1-206ENST00000477664 PRR20CP86479 221 aa7.32□□□□□ -1.24
DCLK1-206ENST00000477664 PRR20DP86480 221 aa7.32□□□□□ -1.24
DCLK1-206ENST00000477664 PRR20BP86481 221 aa7.32□□□□□ -1.24
DCLK1-206ENST00000477664 PRR20AP86496 221 aa7.32□□□□□ -1.24
DCLK1-206ENST00000477664 TSR1Q2NL82 804 aaKnown RBP7.32□□□□□ -1.24
DCLK1-206ENST00000477664 FAM198AQ9UFP1 575 aa7.32□□□□□ -1.24
DCLK1-206ENST00000477664 FAM187AA6NFU0 413 aa7.31□□□□□ -1.24
DCLK1-206ENST00000477664 C3orf80F5H4A9 247 aa7.31□□□□□ -1.24
DCLK1-206ENST00000477664 COPS2P61201 443 aa7.31□□□□□ -1.24
DCLK1-206ENST00000477664 SPRYD7Q5W111 196 aa7.31□□□□□ -1.24
DCLK1-206ENST00000477664 PPARGC1BQ86YN6 1023 aaKnown RBP7.31□□□□□ -1.24
DCLK1-206ENST00000477664 CASKIN1Q8WXD9 1431 aa7.31□□□□□ -1.24
DCLK1-206ENST00000477664 DDX12PQ92771 950 aa7.31□□□□□ -1.24
DCLK1-206ENST00000477664 PRG4Q92954 1404 aaPredicted RBP7.31□□□□□ -1.24
DCLK1-206ENST00000477664 TTBK1Q5TCY1 1321 aaPredicted RBP7.3□□□□□ -1.24
DCLK1-206ENST00000477664 PTPRGP23470 1445 aa7.3□□□□□ -1.24
DCLK1-206ENST00000477664 LOC100996750A0A140TA64 210 aa7.3□□□□□ -1.24
DCLK1-206ENST00000477664 ST8SIA5O15466 376 aa7.3□□□□□ -1.24
DCLK1-206ENST00000477664 RNF40O75150 1001 aa7.3□□□□□ -1.24
DCLK1-206ENST00000477664 ZNF598Q86UK7 904 aaKnown RBP7.3□□□□□ -1.24
DCLK1-206ENST00000477664 TATDN2Q93075 761 aa7.3□□□□□ -1.24
DCLK1-206ENST00000477664 CDCA7LQ96GN5 454 aa7.3□□□□□ -1.24
DCLK1-206ENST00000477664 KRTAP4-6Q9BYQ5 205 aa7.3□□□□□ -1.24
DCLK1-206ENST00000477664 DISP1Q96F81 1524 aa7.3□□□□□ -1.24
DCLK1-206ENST00000477664 SAMD9Q5K651 1589 aa7.29□□□□□ -1.24
DCLK1-206ENST00000477664 RNF223E7ERA6 249 aa7.29□□□□□ -1.24
DCLK1-206ENST00000477664 WFS1O76024 890 aa7.29□□□□□ -1.24
DCLK1-206ENST00000477664 PRSS12P56730 875 aa7.29□□□□□ -1.24
DCLK1-206ENST00000477664 EN1Q05925 392 aaPredicted RBP7.29□□□□□ -1.24
DCLK1-206ENST00000477664 CDK11AQ9UQ88 783 aaPredicted RBP7.29□□□□□ -1.24
DCLK1-206ENST00000477664 MAP3K1Q13233 1512 aa7.28□□□□□ -1.24
DCLK1-206ENST00000477664 DPYSL4O14531 572 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms