RNA–Protein interactions for RNA: ENST00000477424.2

C4A-253, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-253ENST00000477424 SETD5Q9C0A6 1442 aa26.76■■□□□ 1.87
C4A-253ENST00000477424 XIRP1Q702N8 1843 aaKnown RBP26.75■■□□□ 1.87
C4A-253ENST00000477424 SLC4A1APQ9BWU0 796 aaKnown RBP26.75■■□□□ 1.87
C4A-253ENST00000477424 PLEKHG1Q9ULL1 1385 aa26.72■■□□□ 1.87
C4A-253ENST00000477424 LRRC7Q96NW7 1537 aa26.72■■□□□ 1.87
C4A-253ENST00000477424 SENP3Q9H4L4 574 aaPredicted RBP26.72■■□□□ 1.87
C4A-253ENST00000477424 NUTM2DQ5VT03 806 aaPredicted RBP26.7■■□□□ 1.86
C4A-253ENST00000477424 NWD1Q149M9 1564 aa26.7■■□□□ 1.86
C4A-253ENST00000477424 RAB3GAP2Q9H2M9 1393 aa26.7■■□□□ 1.86
C4A-253ENST00000477424 SLC26A8Q96RN1 970 aa26.69■■□□□ 1.86
C4A-253ENST00000477424 CHD2O14647 1828 aaKnown RBP26.68■■□□□ 1.86
C4A-253ENST00000477424 FOXD1Q16676 465 aa26.68■■□□□ 1.86
C4A-253ENST00000477424 NEXMIFQ5QGS0 1516 aa26.68■■□□□ 1.86
C4A-253ENST00000477424 NRXN3Q9Y4C0 1643 aa26.68■■□□□ 1.86
C4A-253ENST00000477424 PPP1R15AO75807 674 aaPredicted RBP26.67■■□□□ 1.86
C4A-253ENST00000477424 ALKQ9UM73 1620 aa26.67■■□□□ 1.86
C4A-253ENST00000477424 ADAMTS13Q76LX8 1427 aa26.65■■□□□ 1.86
C4A-253ENST00000477424 DIP2AQ14689 1571 aa26.64■■□□□ 1.86
C4A-253ENST00000477424 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.64■■□□□ 1.86
C4A-253ENST00000477424 MPHOSPH9Q99550 1183 aa26.64■■□□□ 1.86
C4A-253ENST00000477424 HDGFP51858 240 aaKnown RBP26.62■■□□□ 1.85
C4A-253ENST00000477424 BCANQ96GW7 911 aa26.62■■□□□ 1.85
C4A-253ENST00000477424 PPLO60437 1756 aa26.61■■□□□ 1.85
C4A-253ENST00000477424 UBAP1LF5GYI3 381 aa26.61■■□□□ 1.85
C4A-253ENST00000477424 SETBP1Q9Y6X0 1596 aa26.61■■□□□ 1.85
C4A-253ENST00000477424 ZNF326Q5BKZ1 582 aaKnown RBP26.59■■□□□ 1.85
C4A-253ENST00000477424 NKTRP30414 1462 aaKnown RBP26.59■■□□□ 1.85
C4A-253ENST00000477424 KCNA6P17658 529 aa26.57■■□□□ 1.84
C4A-253ENST00000477424 IFT172Q9UG01 1749 aa26.55■■□□□ 1.84
C4A-253ENST00000477424 CCDC144AA2RUR9 1427 aa26.55■■□□□ 1.84
C4A-253ENST00000477424 SETD1AO15047 1707 aaKnown RBP26.54■■□□□ 1.84
C4A-253ENST00000477424 TBX22Q9Y458 520 aa26.54■■□□□ 1.84
C4A-253ENST00000477424 ACIN1Q9UKV3 1341 aaKnown RBP26.53■■□□□ 1.84
C4A-253ENST00000477424 TMEM94Q12767 1356 aa26.52■■□□□ 1.84
C4A-253ENST00000477424 XRN1Q8IZH2 1706 aaKnown RBP26.51■■□□□ 1.83
C4A-253ENST00000477424 SPATA31E1Q6ZUB1 1445 aa26.51■■□□□ 1.83
C4A-253ENST00000477424 PTPRUQ92729 1446 aa26.5■■□□□ 1.83
C4A-253ENST00000477424 RBM33Q96EV2 1170 aaKnown RBP26.49■■□□□ 1.83
C4A-253ENST00000477424 PIK3R4Q99570 1358 aa26.47■■□□□ 1.83
C4A-253ENST00000477424 TOM1O60784 492 aa26.47■■□□□ 1.83
C4A-253ENST00000477424 PROSER2Q86WR7 435 aaPredicted RBP26.46■■□□□ 1.83
C4A-253ENST00000477424 PIP4K2BP78356 416 aa26.45■■□□□ 1.82
C4A-253ENST00000477424 METP08581 1390 aa26.44■■□□□ 1.82
C4A-253ENST00000477424 SCAF1Q9H7N4 1312 aaKnown RBP26.43■■□□□ 1.82
C4A-253ENST00000477424 RPGRIP1LQ68CZ1 1315 aa26.42■■□□□ 1.82
C4A-253ENST00000477424 HRCP23327 699 aa26.42■■□□□ 1.82
C4A-253ENST00000477424 ANKRD30BQ9BXX2 1392 aa26.38■■□□□ 1.81
C4A-253ENST00000477424 VGFO15240 615 aaPredicted RBP26.38■■□□□ 1.81
C4A-253ENST00000477424 RGL3Q3MIN7 710 aa26.38■■□□□ 1.81
C4A-253ENST00000477424 AMOTL2Q9Y2J4 779 aa26.38■■□□□ 1.81
C4A-253ENST00000477424 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.37■■□□□ 1.81
C4A-253ENST00000477424 ADGRF5Q8IZF2 1346 aa26.35■■□□□ 1.81
C4A-253ENST00000477424 HSPA1LP34931 641 aa26.34■■□□□ 1.81
C4A-253ENST00000477424 ROBO1Q9Y6N7 1651 aa26.34■■□□□ 1.81
C4A-253ENST00000477424 MSH6P52701 1360 aa26.33■■□□□ 1.81
C4A-253ENST00000477424 NCOA3Q9Y6Q9 1424 aa26.32■■□□□ 1.8
C4A-253ENST00000477424 NALCNQ8IZF0 1738 aa26.32■■□□□ 1.8
C4A-253ENST00000477424 ASXL1Q8IXJ9 1541 aa26.31■■□□□ 1.8
C4A-253ENST00000477424 PIK3C2GO75747 1445 aa26.3■■□□□ 1.8
C4A-253ENST00000477424 MYOM2P54296 1465 aa26.29■■□□□ 1.8
C4A-253ENST00000477424 NRXN1Q9ULB1 1477 aa26.28■■□□□ 1.8
C4A-253ENST00000477424 PRAG1Q86YV5 1406 aa26.27■■□□□ 1.8
C4A-253ENST00000477424 PTCH1Q13635 1447 aa26.26■■□□□ 1.79
C4A-253ENST00000477424 FAM135BQ49AJ0 1406 aa26.25■■□□□ 1.79
C4A-253ENST00000477424 C14orf37Q86TY3 774 aa26.24■■□□□ 1.79
C4A-253ENST00000477424 KNDC1Q76NI1 1749 aa26.24■■□□□ 1.79
C4A-253ENST00000477424 LAMC1P11047 1609 aa26.24■■□□□ 1.79
C4A-253ENST00000477424 ROBO2Q9HCK4 1378 aa26.23■■□□□ 1.79
C4A-253ENST00000477424 ADGRL3Q9HAR2 1447 aa26.21■■□□□ 1.79
C4A-253ENST00000477424 C19orf44Q9H6X5 657 aa26.2■■□□□ 1.78
C4A-253ENST00000477424 DCCP43146 1447 aa26.2■■□□□ 1.78
C4A-253ENST00000477424 SLAIN2Q9P270 581 aa26.18■■□□□ 1.78
C4A-253ENST00000477424 PHLPP1O60346 1717 aa26.17■■□□□ 1.78
C4A-253ENST00000477424 TECPR2O15040 1411 aa26.15■■□□□ 1.78
C4A-253ENST00000477424 DHX57Q6P158 1386 aaKnown RBP26.15■■□□□ 1.78
C4A-253ENST00000477424 MED1Q15648 1581 aaPredicted RBP26.15■■□□□ 1.78
C4A-253ENST00000477424 MST1RQ04912 1400 aa26.14■■□□□ 1.78
C4A-253ENST00000477424 ATF3P18847 181 aa26.14■■□□□ 1.78
C4A-253ENST00000477424 TMEM132EQ6IEE7 984 aa26.14■■□□□ 1.78
C4A-253ENST00000477424 CADPS2Q86UW7 1296 aa26.14■■□□□ 1.78
C4A-253ENST00000477424 LRPPRCP42704 1394 aaKnown RBP26.14■■□□□ 1.78
C4A-253ENST00000477424 COL16A1Q07092 1604 aaPredicted RBP26.12■■□□□ 1.77
C4A-253ENST00000477424 YTHDC2Q9H6S0 1430 aaKnown RBP26.12■■□□□ 1.77
C4A-253ENST00000477424 CFAP70Q5T0N1 1121 aa26.11■■□□□ 1.77
C4A-253ENST00000477424 C14orf93Q9H972 538 aaKnown RBP26.11■■□□□ 1.77
C4A-253ENST00000477424 STK26Q9P289 416 aa26.1■■□□□ 1.77
C4A-253ENST00000477424 ADGRB1O14514 1584 aa26.1■■□□□ 1.77
C4A-253ENST00000477424 AHDC1Q5TGY3 1603 aaPredicted RBP26.1■■□□□ 1.77
C4A-253ENST00000477424 DISP3Q9P2K9 1392 aa26.08■■□□□ 1.77
C4A-253ENST00000477424 DCAF11Q8TEB1 546 aa26.08■■□□□ 1.77
C4A-253ENST00000477424 ABCC11Q96J66 1382 aa26.07■■□□□ 1.76
C4A-253ENST00000477424 CDC42BPGQ6DT37 1551 aa26.07■■□□□ 1.76
C4A-253ENST00000477424 NHSL1Q5SYE7 1610 aa26.07■■□□□ 1.76
C4A-253ENST00000477424 TRIM26Q12899 539 aaPredicted RBP26.07■■□□□ 1.76
C4A-253ENST00000477424 KDM2AQ9Y2K7 1162 aa26.07■■□□□ 1.76
C4A-253ENST00000477424 PLEKHH1Q9ULM0 1364 aa26.07■■□□□ 1.76
C4A-253ENST00000477424 BRINP3Q76B58 766 aa26.04■■□□□ 1.76
C4A-253ENST00000477424 WAPLQ7Z5K2 1190 aa26.03■■□□□ 1.76
C4A-253ENST00000477424 C1orf167Q5SNV9 1468 aa26.02■■□□□ 1.76
C4A-253ENST00000477424 FMN2Q9NZ56 1722 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 224.7 ms