RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 XIRP1Q702N8 1843 aaKnown RBP34.27■■■■□ 3.08
CNIH4-208ENST00000477413 TRPM2O94759 1503 aa34.26■■■■□ 3.08
CNIH4-208ENST00000477413 NKTRP30414 1462 aaKnown RBP34.22■■■■□ 3.07
CNIH4-208ENST00000477413 DIP2AQ14689 1571 aa34.21■■■■□ 3.07
CNIH4-208ENST00000477413 TOM1O60784 492 aa34.19■■■■□ 3.06
CNIH4-208ENST00000477413 HDGFP51858 240 aaKnown RBP34.19■■■■□ 3.06
CNIH4-208ENST00000477413 CLTCL1P53675 1640 aa34.19■■■■□ 3.06
CNIH4-208ENST00000477413 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.17■■■■□ 3.06
CNIH4-208ENST00000477413 CHD2O14647 1828 aaKnown RBP34.16■■■■□ 3.06
CNIH4-208ENST00000477413 KCNA6P17658 529 aa34.14■■■■□ 3.06
CNIH4-208ENST00000477413 ADAMTS13Q76LX8 1427 aa34.12■■■■□ 3.05
CNIH4-208ENST00000477413 SLC26A8Q96RN1 970 aa34.11■■■■□ 3.05
CNIH4-208ENST00000477413 KIF1BO60333 1816 aa34.09■■■■□ 3.05
CNIH4-208ENST00000477413 SETBP1Q9Y6X0 1596 aa34.08■■■■□ 3.05
CNIH4-208ENST00000477413 PPP1R15AO75807 674 aaPredicted RBP34.08■■■■□ 3.05
CNIH4-208ENST00000477413 PIK3R4Q99570 1358 aa34.07■■■■□ 3.04
CNIH4-208ENST00000477413 NRXN3Q9Y4C0 1643 aa34.07■■■■□ 3.04
CNIH4-208ENST00000477413 CHGAP10645 457 aaKnown RBP34.06■■■■□ 3.04
CNIH4-208ENST00000477413 TBX22Q9Y458 520 aa34.06■■■■□ 3.04
CNIH4-208ENST00000477413 NEXMIFQ5QGS0 1516 aa34.05■■■■□ 3.04
CNIH4-208ENST00000477413 TMEM94Q12767 1356 aa34.04■■■■□ 3.04
CNIH4-208ENST00000477413 PIP4K2BP78356 416 aa33.98■■■■□ 3.03
CNIH4-208ENST00000477413 TRIM52Q96A61 297 aa33.98■■■■□ 3.03
CNIH4-208ENST00000477413 NCOA3Q9Y6Q9 1424 aa33.97■■■■□ 3.03
CNIH4-208ENST00000477413 SLC4A1APQ9BWU0 796 aaKnown RBP33.97■■■■□ 3.03
CNIH4-208ENST00000477413 ACIN1Q9UKV3 1341 aaKnown RBP33.97■■■■□ 3.03
CNIH4-208ENST00000477413 BCANQ96GW7 911 aa33.95■■■■□ 3.03
CNIH4-208ENST00000477413 XRN1Q8IZH2 1706 aaKnown RBP33.95■■■■□ 3.03
CNIH4-208ENST00000477413 HSPA1LP34931 641 aa33.94■■■■□ 3.02
CNIH4-208ENST00000477413 SCAF1Q9H7N4 1312 aaKnown RBP33.93■■■■□ 3.02
CNIH4-208ENST00000477413 NUTM2DQ5VT03 806 aaPredicted RBP33.91■■■■□ 3.02
CNIH4-208ENST00000477413 PROSER2Q86WR7 435 aaPredicted RBP33.91■■■■□ 3.02
CNIH4-208ENST00000477413 FAM135BQ49AJ0 1406 aa33.9■■■■□ 3.02
CNIH4-208ENST00000477413 SETD5Q9C0A6 1442 aa33.88■■■■□ 3.01
CNIH4-208ENST00000477413 PPLO60437 1756 aa33.88■■■■□ 3.01
CNIH4-208ENST00000477413 PTPRUQ92729 1446 aa33.87■■■■□ 3.01
CNIH4-208ENST00000477413 SETD1AO15047 1707 aaKnown RBP33.86■■■■□ 3.01
CNIH4-208ENST00000477413 MSH6P52701 1360 aa33.85■■■■□ 3.01
CNIH4-208ENST00000477413 ZNF326Q5BKZ1 582 aaKnown RBP33.85■■■■□ 3.01
CNIH4-208ENST00000477413 DISP3Q9P2K9 1392 aa33.84■■■■□ 3.01
CNIH4-208ENST00000477413 ROBO1Q9Y6N7 1651 aa33.83■■■■□ 3.01
CNIH4-208ENST00000477413 RPGRIP1LQ68CZ1 1315 aa33.82■■■■□ 3.01
CNIH4-208ENST00000477413 SENP3Q9H4L4 574 aaPredicted RBP33.81■■■■□ 3
CNIH4-208ENST00000477413 MPHOSPH9Q99550 1183 aa33.8■■■■□ 3
CNIH4-208ENST00000477413 MED1Q15648 1581 aaPredicted RBP33.8■■■■□ 3
CNIH4-208ENST00000477413 CCDC144AA2RUR9 1427 aa33.79■■■■□ 3
CNIH4-208ENST00000477413 SPATA31E1Q6ZUB1 1445 aa33.79■■■■□ 3
CNIH4-208ENST00000477413 PRAG1Q86YV5 1406 aa33.79■■■■□ 3
CNIH4-208ENST00000477413 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.78■■■■□ 3
CNIH4-208ENST00000477413 IFT172Q9UG01 1749 aa33.78■■■■□ 3
CNIH4-208ENST00000477413 RBM33Q96EV2 1170 aaKnown RBP33.77■■■■□ 3
CNIH4-208ENST00000477413 METP08581 1390 aa33.76■■■■□ 3
CNIH4-208ENST00000477413 AMOTL2Q9Y2J4 779 aa33.75■■■□□ 2.99
CNIH4-208ENST00000477413 DCCP43146 1447 aa33.75■■■□□ 2.99
CNIH4-208ENST00000477413 RAB3GAP2Q9H2M9 1393 aa33.74■■■□□ 2.99
CNIH4-208ENST00000477413 VGFO15240 615 aaPredicted RBP33.73■■■□□ 2.99
CNIH4-208ENST00000477413 FOXD1Q16676 465 aa33.73■■■□□ 2.99
CNIH4-208ENST00000477413 PTCH1Q13635 1447 aa33.69■■■□□ 2.98
CNIH4-208ENST00000477413 C19orf44Q9H6X5 657 aa33.67■■■□□ 2.98
CNIH4-208ENST00000477413 SLAIN2Q9P270 581 aa33.66■■■□□ 2.98
CNIH4-208ENST00000477413 ANKRD30BQ9BXX2 1392 aa33.63■■■□□ 2.97
CNIH4-208ENST00000477413 NALCNQ8IZF0 1738 aa33.63■■■□□ 2.97
CNIH4-208ENST00000477413 CADPS2Q86UW7 1296 aa33.63■■■□□ 2.97
CNIH4-208ENST00000477413 HRCP23327 699 aa33.62■■■□□ 2.97
CNIH4-208ENST00000477413 ADGRL3Q9HAR2 1447 aa33.62■■■□□ 2.97
CNIH4-208ENST00000477413 AHDC1Q5TGY3 1603 aaPredicted RBP33.6■■■□□ 2.97
CNIH4-208ENST00000477413 PHLPP1O60346 1717 aa33.59■■■□□ 2.97
CNIH4-208ENST00000477413 COL16A1Q07092 1604 aaPredicted RBP33.58■■■□□ 2.97
CNIH4-208ENST00000477413 ILDR2Q71H61 639 aa33.57■■■□□ 2.96
CNIH4-208ENST00000477413 PIK3C2GO75747 1445 aa33.56■■■□□ 2.96
CNIH4-208ENST00000477413 C14orf37Q86TY3 774 aa33.56■■■□□ 2.96
CNIH4-208ENST00000477413 NRXN1Q9ULB1 1477 aa33.55■■■□□ 2.96
CNIH4-208ENST00000477413 ATF3P18847 181 aa33.54■■■□□ 2.96
CNIH4-208ENST00000477413 MYOM2P54296 1465 aa33.54■■■□□ 2.96
CNIH4-208ENST00000477413 MST1RQ04912 1400 aa33.53■■■□□ 2.96
CNIH4-208ENST00000477413 KNDC1Q76NI1 1749 aa33.52■■■□□ 2.96
CNIH4-208ENST00000477413 TECPR2O15040 1411 aa33.52■■■□□ 2.96
CNIH4-208ENST00000477413 ADGRF5Q8IZF2 1346 aa33.52■■■□□ 2.96
CNIH4-208ENST00000477413 ROBO2Q9HCK4 1378 aa33.51■■■□□ 2.96
CNIH4-208ENST00000477413 ASXL1Q8IXJ9 1541 aa33.51■■■□□ 2.95
CNIH4-208ENST00000477413 LAMC1P11047 1609 aa33.5■■■□□ 2.95
CNIH4-208ENST00000477413 NHSL1Q5SYE7 1610 aa33.47■■■□□ 2.95
CNIH4-208ENST00000477413 RGL3Q3MIN7 710 aa33.46■■■□□ 2.95
CNIH4-208ENST00000477413 JCADQ9P266 1359 aa33.43■■■□□ 2.94
CNIH4-208ENST00000477413 SHPRHQ149N8 1683 aa33.42■■■□□ 2.94
CNIH4-208ENST00000477413 BRINP3Q76B58 766 aa33.42■■■□□ 2.94
CNIH4-208ENST00000477413 CDC42BPGQ6DT37 1551 aa33.42■■■□□ 2.94
CNIH4-208ENST00000477413 LRPPRCP42704 1394 aaKnown RBP33.41■■■□□ 2.94
CNIH4-208ENST00000477413 ABCC11Q96J66 1382 aa33.38■■■□□ 2.93
CNIH4-208ENST00000477413 C1orf167Q5SNV9 1468 aa33.35■■■□□ 2.93
CNIH4-208ENST00000477413 SOCS7O14512 581 aa33.34■■■□□ 2.93
CNIH4-208ENST00000477413 PHF23Q9BUL5 403 aaPredicted RBP33.32■■■□□ 2.92
CNIH4-208ENST00000477413 YTHDC2Q9H6S0 1430 aaKnown RBP33.32■■■□□ 2.92
CNIH4-208ENST00000477413 C14orf93Q9H972 538 aaKnown RBP33.31■■■□□ 2.92
CNIH4-208ENST00000477413 SPATA31A6Q5VVP1 1343 aa33.28■■■□□ 2.92
CNIH4-208ENST00000477413 ADGRB1O14514 1584 aa33.26■■■□□ 2.92
CNIH4-208ENST00000477413 DLC1Q96QB1 1528 aa33.25■■■□□ 2.91
CNIH4-208ENST00000477413 SIRT1Q96EB6 747 aa33.25■■■□□ 2.91
CNIH4-208ENST00000477413 STAC3Q96MF2 364 aa33.25■■■□□ 2.91
CNIH4-208ENST00000477413 LRP6O75581 1613 aa33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms