RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 UBAP1LF5GYI3 381 aa23.41■■□□□ 1.34
COMMD6-209ENST00000477377 ALKQ9UM73 1620 aa23.41■■□□□ 1.34
COMMD6-209ENST00000477377 TRPM2O94759 1503 aa23.39■■□□□ 1.34
COMMD6-209ENST00000477377 NUTM2DQ5VT03 806 aaPredicted RBP23.39■■□□□ 1.33
COMMD6-209ENST00000477377 CLTCL1P53675 1640 aa23.38■■□□□ 1.33
COMMD6-209ENST00000477377 KCNA6P17658 529 aa23.37■■□□□ 1.33
COMMD6-209ENST00000477377 SLC4A1APQ9BWU0 796 aaKnown RBP23.37■■□□□ 1.33
COMMD6-209ENST00000477377 HDGFP51858 240 aaKnown RBP23.36■■□□□ 1.33
COMMD6-209ENST00000477377 SENP3Q9H4L4 574 aaPredicted RBP23.36■■□□□ 1.33
COMMD6-209ENST00000477377 ADAMTS13Q76LX8 1427 aa23.35■■□□□ 1.33
COMMD6-209ENST00000477377 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.35■■□□□ 1.33
COMMD6-209ENST00000477377 XIRP1Q702N8 1843 aaKnown RBP23.33■■□□□ 1.33
COMMD6-209ENST00000477377 FOXD1Q16676 465 aa23.33■■□□□ 1.33
COMMD6-209ENST00000477377 TBX22Q9Y458 520 aa23.33■■□□□ 1.33
COMMD6-209ENST00000477377 MPHOSPH9Q99550 1183 aa23.32■■□□□ 1.32
COMMD6-209ENST00000477377 SETD5Q9C0A6 1442 aa23.32■■□□□ 1.32
COMMD6-209ENST00000477377 PPP1R15AO75807 674 aaPredicted RBP23.31■■□□□ 1.32
COMMD6-209ENST00000477377 NWD1Q149M9 1564 aa23.31■■□□□ 1.32
COMMD6-209ENST00000477377 TOM1O60784 492 aa23.3■■□□□ 1.32
COMMD6-209ENST00000477377 BCANQ96GW7 911 aa23.29■■□□□ 1.32
COMMD6-209ENST00000477377 NEXMIFQ5QGS0 1516 aa23.28■■□□□ 1.32
COMMD6-209ENST00000477377 CHD2O14647 1828 aaKnown RBP23.27■■□□□ 1.32
COMMD6-209ENST00000477377 TMEM94Q12767 1356 aa23.27■■□□□ 1.31
COMMD6-209ENST00000477377 NRXN3Q9Y4C0 1643 aa23.26■■□□□ 1.31
COMMD6-209ENST00000477377 RBM33Q96EV2 1170 aaKnown RBP23.26■■□□□ 1.31
COMMD6-209ENST00000477377 RAB3GAP2Q9H2M9 1393 aa23.26■■□□□ 1.31
COMMD6-209ENST00000477377 ZNF326Q5BKZ1 582 aaKnown RBP23.25■■□□□ 1.31
COMMD6-209ENST00000477377 PIP4K2BP78356 416 aa23.24■■□□□ 1.31
COMMD6-209ENST00000477377 KIF1BO60333 1816 aa23.24■■□□□ 1.31
COMMD6-209ENST00000477377 PTPRUQ92729 1446 aa23.24■■□□□ 1.31
COMMD6-209ENST00000477377 NKTRP30414 1462 aaKnown RBP23.24■■□□□ 1.31
COMMD6-209ENST00000477377 PROSER2Q86WR7 435 aaPredicted RBP23.23■■□□□ 1.31
COMMD6-209ENST00000477377 DIP2AQ14689 1571 aa23.23■■□□□ 1.31
COMMD6-209ENST00000477377 SETBP1Q9Y6X0 1596 aa23.23■■□□□ 1.31
COMMD6-209ENST00000477377 PIK3R4Q99570 1358 aa23.21■■□□□ 1.31
COMMD6-209ENST00000477377 HSPA1LP34931 641 aa23.19■■□□□ 1.3
COMMD6-209ENST00000477377 ACIN1Q9UKV3 1341 aaKnown RBP23.18■■□□□ 1.3
COMMD6-209ENST00000477377 SPATA31E1Q6ZUB1 1445 aa23.17■■□□□ 1.3
COMMD6-209ENST00000477377 METP08581 1390 aa23.17■■□□□ 1.3
COMMD6-209ENST00000477377 RPGRIP1LQ68CZ1 1315 aa23.16■■□□□ 1.3
COMMD6-209ENST00000477377 SCAF1Q9H7N4 1312 aaKnown RBP23.16■■□□□ 1.3
COMMD6-209ENST00000477377 AMOTL2Q9Y2J4 779 aa23.16■■□□□ 1.3
COMMD6-209ENST00000477377 HRCP23327 699 aa23.14■■□□□ 1.29
COMMD6-209ENST00000477377 CCDC144AA2RUR9 1427 aa23.14■■□□□ 1.29
COMMD6-209ENST00000477377 PPLO60437 1756 aa23.12■■□□□ 1.29
COMMD6-209ENST00000477377 VGFO15240 615 aaPredicted RBP23.12■■□□□ 1.29
COMMD6-209ENST00000477377 NCOA3Q9Y6Q9 1424 aa23.12■■□□□ 1.29
COMMD6-209ENST00000477377 XRN1Q8IZH2 1706 aaKnown RBP23.11■■□□□ 1.29
COMMD6-209ENST00000477377 SETD1AO15047 1707 aaKnown RBP23.1■■□□□ 1.29
COMMD6-209ENST00000477377 FAM135BQ49AJ0 1406 aa23.09■■□□□ 1.29
COMMD6-209ENST00000477377 ADGRF5Q8IZF2 1346 aa23.08■■□□□ 1.29
COMMD6-209ENST00000477377 RGL3Q3MIN7 710 aa23.08■■□□□ 1.29
COMMD6-209ENST00000477377 MSH6P52701 1360 aa23.07■■□□□ 1.28
COMMD6-209ENST00000477377 ANKRD30BQ9BXX2 1392 aa23.06■■□□□ 1.28
COMMD6-209ENST00000477377 IFT172Q9UG01 1749 aa23.05■■□□□ 1.28
COMMD6-209ENST00000477377 C19orf44Q9H6X5 657 aa23.03■■□□□ 1.28
COMMD6-209ENST00000477377 SLAIN2Q9P270 581 aa23.03■■□□□ 1.28
COMMD6-209ENST00000477377 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.02■■□□□ 1.28
COMMD6-209ENST00000477377 ROBO1Q9Y6N7 1651 aa23■■□□□ 1.27
COMMD6-209ENST00000477377 PRAG1Q86YV5 1406 aa22.99■■□□□ 1.27
COMMD6-209ENST00000477377 ROBO2Q9HCK4 1378 aa22.98■■□□□ 1.27
COMMD6-209ENST00000477377 DISP3Q9P2K9 1392 aa22.97■■□□□ 1.27
COMMD6-209ENST00000477377 PIK3C2GO75747 1445 aa22.97■■□□□ 1.27
COMMD6-209ENST00000477377 NRXN1Q9ULB1 1477 aa22.96■■□□□ 1.27
COMMD6-209ENST00000477377 PTCH1Q13635 1447 aa22.95■■□□□ 1.26
COMMD6-209ENST00000477377 C14orf37Q86TY3 774 aa22.95■■□□□ 1.26
COMMD6-209ENST00000477377 CADPS2Q86UW7 1296 aa22.95■■□□□ 1.26
COMMD6-209ENST00000477377 ASXL1Q8IXJ9 1541 aa22.94■■□□□ 1.26
COMMD6-209ENST00000477377 DCCP43146 1447 aa22.93■■□□□ 1.26
COMMD6-209ENST00000477377 ATF3P18847 181 aa22.92■■□□□ 1.26
COMMD6-209ENST00000477377 ILDR2Q71H61 639 aa22.92■■□□□ 1.26
COMMD6-209ENST00000477377 MYOM2P54296 1465 aa22.92■■□□□ 1.26
COMMD6-209ENST00000477377 ADGRL3Q9HAR2 1447 aa22.91■■□□□ 1.26
COMMD6-209ENST00000477377 C14orf93Q9H972 538 aaKnown RBP22.91■■□□□ 1.26
COMMD6-209ENST00000477377 MST1RQ04912 1400 aa22.91■■□□□ 1.26
COMMD6-209ENST00000477377 MED1Q15648 1581 aaPredicted RBP22.9■■□□□ 1.26
COMMD6-209ENST00000477377 TMEM132EQ6IEE7 984 aa22.9■■□□□ 1.26
COMMD6-209ENST00000477377 NALCNQ8IZF0 1738 aa22.9■■□□□ 1.26
COMMD6-209ENST00000477377 TECPR2O15040 1411 aa22.88■■□□□ 1.25
COMMD6-209ENST00000477377 LRPPRCP42704 1394 aaKnown RBP22.88■■□□□ 1.25
COMMD6-209ENST00000477377 CFAP70Q5T0N1 1121 aa22.87■■□□□ 1.25
COMMD6-209ENST00000477377 BRINP3Q76B58 766 aa22.87■■□□□ 1.25
COMMD6-209ENST00000477377 DHX57Q6P158 1386 aaKnown RBP22.87■■□□□ 1.25
COMMD6-209ENST00000477377 ABCC11Q96J66 1382 aa22.87■■□□□ 1.25
COMMD6-209ENST00000477377 COL16A1Q07092 1604 aaPredicted RBP22.83■■□□□ 1.25
COMMD6-209ENST00000477377 PHLPP1O60346 1717 aa22.83■■□□□ 1.25
COMMD6-209ENST00000477377 WAPLQ7Z5K2 1190 aa22.83■■□□□ 1.25
COMMD6-209ENST00000477377 STK26Q9P289 416 aa22.83■■□□□ 1.25
COMMD6-209ENST00000477377 YTHDC2Q9H6S0 1430 aaKnown RBP22.82■■□□□ 1.24
COMMD6-209ENST00000477377 AHDC1Q5TGY3 1603 aaPredicted RBP22.82■■□□□ 1.24
COMMD6-209ENST00000477377 PLEKHH1Q9ULM0 1364 aa22.82■■□□□ 1.24
COMMD6-209ENST00000477377 C1orf167Q5SNV9 1468 aa22.8■■□□□ 1.24
COMMD6-209ENST00000477377 KNDC1Q76NI1 1749 aa22.8■■□□□ 1.24
COMMD6-209ENST00000477377 DCAF11Q8TEB1 546 aa22.8■■□□□ 1.24
COMMD6-209ENST00000477377 SIRT1Q96EB6 747 aa22.8■■□□□ 1.24
COMMD6-209ENST00000477377 ADGRB1O14514 1584 aa22.78■■□□□ 1.24
COMMD6-209ENST00000477377 KDM2AQ9Y2K7 1162 aa22.78■■□□□ 1.24
COMMD6-209ENST00000477377 LAMC1P11047 1609 aa22.76■■□□□ 1.23
COMMD6-209ENST00000477377 DDX17Q92841 729 aaKnown RBP22.76■■□□□ 1.23
COMMD6-209ENST00000477377 RGS17Q9UGC6 210 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms