RNA–Protein interactions for RNA: ENST00000477375.5

IMP4-215, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-215ENST00000477375 CERKQ8TCT0 537 aa25.88■■□□□ 1.73
IMP4-215ENST00000477375 SENP3Q9H4L4 574 aaPredicted RBP25.86■■□□□ 1.73
IMP4-215ENST00000477375 NUTM2DQ5VT03 806 aaPredicted RBP25.85■■□□□ 1.73
IMP4-215ENST00000477375 ACIN1Q9UKV3 1341 aaKnown RBP25.82■■□□□ 1.72
IMP4-215ENST00000477375 HRCP23327 699 aa25.8■■□□□ 1.72
IMP4-215ENST00000477375 NEXMIFQ5QGS0 1516 aa25.78■■□□□ 1.72
IMP4-215ENST00000477375 SLC26A8Q96RN1 970 aa25.78■■□□□ 1.72
IMP4-215ENST00000477375 PPP1R15AO75807 674 aaPredicted RBP25.76■■□□□ 1.71
IMP4-215ENST00000477375 ZNF326Q5BKZ1 582 aaKnown RBP25.76■■□□□ 1.71
IMP4-215ENST00000477375 PLEKHG1Q9ULL1 1385 aa25.76■■□□□ 1.71
IMP4-215ENST00000477375 PPLO60437 1756 aa25.76■■□□□ 1.71
IMP4-215ENST00000477375 ILDR1Q86SU0 546 aaPredicted RBP25.75■■□□□ 1.71
IMP4-215ENST00000477375 NRXN3Q9Y4C0 1643 aa25.74■■□□□ 1.71
IMP4-215ENST00000477375 HDGFP51858 240 aaKnown RBP25.74■■□□□ 1.71
IMP4-215ENST00000477375 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.74■■□□□ 1.71
IMP4-215ENST00000477375 CHD2O14647 1828 aaKnown RBP25.74■■□□□ 1.71
IMP4-215ENST00000477375 XIRP1Q702N8 1843 aaKnown RBP25.74■■□□□ 1.71
IMP4-215ENST00000477375 BCANQ96GW7 911 aa25.73■■□□□ 1.71
IMP4-215ENST00000477375 CPS1P31327 1500 aa25.73■■□□□ 1.71
IMP4-215ENST00000477375 CCDC144AA2RUR9 1427 aa25.72■■□□□ 1.71
IMP4-215ENST00000477375 IFT172Q9UG01 1749 aa25.71■■□□□ 1.71
IMP4-215ENST00000477375 ADAMTS13Q76LX8 1427 aa25.71■■□□□ 1.71
IMP4-215ENST00000477375 FBXO41Q8TF61 875 aa25.69■■□□□ 1.7
IMP4-215ENST00000477375 SPATA31E1Q6ZUB1 1445 aa25.69■■□□□ 1.7
IMP4-215ENST00000477375 TRIM26Q12899 539 aaPredicted RBP25.68■■□□□ 1.7
IMP4-215ENST00000477375 IQSEC2Q5JU85 1478 aa25.67■■□□□ 1.7
IMP4-215ENST00000477375 ANKRD30BQ9BXX2 1392 aa25.67■■□□□ 1.7
IMP4-215ENST00000477375 LRRC7Q96NW7 1537 aa25.66■■□□□ 1.7
IMP4-215ENST00000477375 SETBP1Q9Y6X0 1596 aa25.65■■□□□ 1.7
IMP4-215ENST00000477375 NWD1Q149M9 1564 aa25.65■■□□□ 1.7
IMP4-215ENST00000477375 RGL3Q3MIN7 710 aa25.64■■□□□ 1.7
IMP4-215ENST00000477375 TBX22Q9Y458 520 aa25.64■■□□□ 1.7
IMP4-215ENST00000477375 DIP2AQ14689 1571 aa25.64■■□□□ 1.69
IMP4-215ENST00000477375 SETD1AO15047 1707 aaKnown RBP25.63■■□□□ 1.69
IMP4-215ENST00000477375 KCNA6P17658 529 aa25.61■■□□□ 1.69
IMP4-215ENST00000477375 RPGRIP1LQ68CZ1 1315 aa25.61■■□□□ 1.69
IMP4-215ENST00000477375 PTPRUQ92729 1446 aa25.57■■□□□ 1.68
IMP4-215ENST00000477375 VGFO15240 615 aaPredicted RBP25.56■■□□□ 1.68
IMP4-215ENST00000477375 RBM33Q96EV2 1170 aaKnown RBP25.56■■□□□ 1.68
IMP4-215ENST00000477375 ALKQ9UM73 1620 aa25.55■■□□□ 1.68
IMP4-215ENST00000477375 ADGRF5Q8IZF2 1346 aa25.55■■□□□ 1.68
IMP4-215ENST00000477375 METP08581 1390 aa25.55■■□□□ 1.68
IMP4-215ENST00000477375 XRN1Q8IZH2 1706 aaKnown RBP25.54■■□□□ 1.68
IMP4-215ENST00000477375 NKTRP30414 1462 aaKnown RBP25.53■■□□□ 1.68
IMP4-215ENST00000477375 UBAP1LF5GYI3 381 aa25.52■■□□□ 1.68
IMP4-215ENST00000477375 PROSER2Q86WR7 435 aaPredicted RBP25.52■■□□□ 1.68
IMP4-215ENST00000477375 TMEM94Q12767 1356 aa25.51■■□□□ 1.67
IMP4-215ENST00000477375 PIK3R4Q99570 1358 aa25.51■■□□□ 1.67
IMP4-215ENST00000477375 AMOTL2Q9Y2J4 779 aa25.49■■□□□ 1.67
IMP4-215ENST00000477375 DHX57Q6P158 1386 aaKnown RBP25.44■■□□□ 1.66
IMP4-215ENST00000477375 MYOM2P54296 1465 aa25.43■■□□□ 1.66
IMP4-215ENST00000477375 NRXN1Q9ULB1 1477 aa25.43■■□□□ 1.66
IMP4-215ENST00000477375 PIK3C2GO75747 1445 aa25.43■■□□□ 1.66
IMP4-215ENST00000477375 ASXL1Q8IXJ9 1541 aa25.42■■□□□ 1.66
IMP4-215ENST00000477375 TOM1O60784 492 aa25.41■■□□□ 1.66
IMP4-215ENST00000477375 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.4■■□□□ 1.66
IMP4-215ENST00000477375 PIP4K2BP78356 416 aa25.4■■□□□ 1.66
IMP4-215ENST00000477375 SIN3AQ96ST3 1273 aa25.39■■□□□ 1.66
IMP4-215ENST00000477375 KDM2AQ9Y2K7 1162 aa25.39■■□□□ 1.66
IMP4-215ENST00000477375 DCAF11Q8TEB1 546 aa25.38■■□□□ 1.65
IMP4-215ENST00000477375 TMEM132EQ6IEE7 984 aa25.36■■□□□ 1.65
IMP4-215ENST00000477375 SCAF1Q9H7N4 1312 aaKnown RBP25.36■■□□□ 1.65
IMP4-215ENST00000477375 NALCNQ8IZF0 1738 aa25.35■■□□□ 1.65
IMP4-215ENST00000477375 LAMC1P11047 1609 aa25.35■■□□□ 1.65
IMP4-215ENST00000477375 CFAP70Q5T0N1 1121 aa25.35■■□□□ 1.65
IMP4-215ENST00000477375 PCGF6Q9BYE7 350 aa25.34■■□□□ 1.65
IMP4-215ENST00000477375 MSH6P52701 1360 aa25.33■■□□□ 1.65
IMP4-215ENST00000477375 KNDC1Q76NI1 1749 aa25.33■■□□□ 1.65
IMP4-215ENST00000477375 C14orf93Q9H972 538 aaKnown RBP25.33■■□□□ 1.65
IMP4-215ENST00000477375 NCOA3Q9Y6Q9 1424 aa25.33■■□□□ 1.65
IMP4-215ENST00000477375 ROBO2Q9HCK4 1378 aa25.32■■□□□ 1.64
IMP4-215ENST00000477375 C14orf37Q86TY3 774 aa25.3■■□□□ 1.64
IMP4-215ENST00000477375 STK26Q9P289 416 aa25.3■■□□□ 1.64
IMP4-215ENST00000477375 PTCH1Q13635 1447 aa25.29■■□□□ 1.64
IMP4-215ENST00000477375 PRAG1Q86YV5 1406 aa25.29■■□□□ 1.64
IMP4-215ENST00000477375 NEUROD1Q13562 356 aa25.29■■□□□ 1.64
IMP4-215ENST00000477375 ROBO1Q9Y6N7 1651 aa25.28■■□□□ 1.64
IMP4-215ENST00000477375 LRPPRCP42704 1394 aaKnown RBP25.27■■□□□ 1.64
IMP4-215ENST00000477375 C19orf44Q9H6X5 657 aa25.26■■□□□ 1.63
IMP4-215ENST00000477375 YTHDC2Q9H6S0 1430 aaKnown RBP25.26■■□□□ 1.63
IMP4-215ENST00000477375 ADGRB1O14514 1584 aa25.26■■□□□ 1.63
IMP4-215ENST00000477375 TECPR2O15040 1411 aa25.24■■□□□ 1.63
IMP4-215ENST00000477375 HSPA1LP34931 641 aa25.24■■□□□ 1.63
IMP4-215ENST00000477375 ADGRL3Q9HAR2 1447 aa25.23■■□□□ 1.63
IMP4-215ENST00000477375 ABCC11Q96J66 1382 aa25.23■■□□□ 1.63
IMP4-215ENST00000477375 WAPLQ7Z5K2 1190 aa25.23■■□□□ 1.63
IMP4-215ENST00000477375 L3MBTL2Q969R5 705 aa25.23■■□□□ 1.63
IMP4-215ENST00000477375 STAC3Q96MF2 364 aa25.23■■□□□ 1.63
IMP4-215ENST00000477375 SLAIN2Q9P270 581 aa25.22■■□□□ 1.63
IMP4-215ENST00000477375 PLEKHH1Q9ULM0 1364 aa25.21■■□□□ 1.63
IMP4-215ENST00000477375 KIAA1210Q9ULL0 1709 aa25.21■■□□□ 1.63
IMP4-215ENST00000477375 FAM135BQ49AJ0 1406 aa25.2■■□□□ 1.63
IMP4-215ENST00000477375 ATF3P18847 181 aa25.19■■□□□ 1.62
IMP4-215ENST00000477375 CADPS2Q86UW7 1296 aa25.19■■□□□ 1.62
IMP4-215ENST00000477375 DCCP43146 1447 aa25.18■■□□□ 1.62
IMP4-215ENST00000477375 MST1RQ04912 1400 aa25.16■■□□□ 1.62
IMP4-215ENST00000477375 ARHGEF28Q8N1W1 1705 aaKnown RBP25.15■■□□□ 1.62
IMP4-215ENST00000477375 DLC1Q96QB1 1528 aa25.13■■□□□ 1.61
IMP4-215ENST00000477375 PHLPP1O60346 1717 aa25.13■■□□□ 1.61
IMP4-215ENST00000477375 NBPF1Q3BBV0 1214 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms