RNA–Protein interactions for RNA: ENST00000477160.1

GFRA4-203, Transcript of GDNF family receptor alpha 4, humanhuman

TSL 1 (best)

Gene GFRA4, Length 549 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-203ENST00000477160 HFM1A2PYH4 1435 aa37.19■■■■□ 3.54
GFRA4-203ENST00000477160 PPP1R15AO75807 674 aaPredicted RBP37.18■■■■□ 3.54
GFRA4-203ENST00000477160 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.18■■■■□ 3.54
GFRA4-203ENST00000477160 BCANQ96GW7 911 aa37.18■■■■□ 3.54
GFRA4-203ENST00000477160 PLEKHG1Q9ULL1 1385 aa37.17■■■■□ 3.54
GFRA4-203ENST00000477160 KCNA6P17658 529 aa37.17■■■■□ 3.54
GFRA4-203ENST00000477160 MYO5BQ9ULV0 1848 aa37.15■■■■□ 3.54
GFRA4-203ENST00000477160 ALKQ9UM73 1620 aa37.11■■■■□ 3.53
GFRA4-203ENST00000477160 SPHKAPQ2M3C7 1700 aa37.07■■■■□ 3.52
GFRA4-203ENST00000477160 HSPA1LP34931 641 aa37.06■■■■□ 3.52
GFRA4-203ENST00000477160 DISP3Q9P2K9 1392 aa37.05■■■■□ 3.52
GFRA4-203ENST00000477160 TRIM52Q96A61 297 aa37.04■■■■□ 3.52
GFRA4-203ENST00000477160 TBX22Q9Y458 520 aa37.04■■■■□ 3.52
GFRA4-203ENST00000477160 NKTRP30414 1462 aaKnown RBP37.04■■■■□ 3.52
GFRA4-203ENST00000477160 NWD1Q149M9 1564 aa37.04■■■■□ 3.52
GFRA4-203ENST00000477160 TMEM94Q12767 1356 aa37.04■■■■□ 3.52
GFRA4-203ENST00000477160 PROSER2Q86WR7 435 aaPredicted RBP37.02■■■■□ 3.52
GFRA4-203ENST00000477160 SENP3Q9H4L4 574 aaPredicted RBP37.02■■■■□ 3.52
GFRA4-203ENST00000477160 NUTM2DQ5VT03 806 aaPredicted RBP37■■■■□ 3.51
GFRA4-203ENST00000477160 XIRP1Q702N8 1843 aaKnown RBP36.99■■■■□ 3.51
GFRA4-203ENST00000477160 TRPM2O94759 1503 aa36.98■■■■□ 3.51
GFRA4-203ENST00000477160 ADAMTS13Q76LX8 1427 aa36.96■■■■□ 3.51
GFRA4-203ENST00000477160 DIP2AQ14689 1571 aa36.95■■■■□ 3.51
GFRA4-203ENST00000477160 SLC4A1APQ9BWU0 796 aaKnown RBP36.94■■■■□ 3.5
GFRA4-203ENST00000477160 ZNF326Q5BKZ1 582 aaKnown RBP36.93■■■■□ 3.5
GFRA4-203ENST00000477160 PIK3R4Q99570 1358 aa36.92■■■■□ 3.5
GFRA4-203ENST00000477160 CHD2O14647 1828 aaKnown RBP36.9■■■■□ 3.5
GFRA4-203ENST00000477160 CLTCL1P53675 1640 aa36.9■■■■□ 3.5
GFRA4-203ENST00000477160 RBM33Q96EV2 1170 aaKnown RBP36.89■■■■□ 3.5
GFRA4-203ENST00000477160 MSH6P52701 1360 aa36.85■■■■□ 3.49
GFRA4-203ENST00000477160 FAM135BQ49AJ0 1406 aa36.84■■■■□ 3.49
GFRA4-203ENST00000477160 NCOA3Q9Y6Q9 1424 aa36.83■■■■□ 3.49
GFRA4-203ENST00000477160 SETBP1Q9Y6X0 1596 aa36.81■■■■□ 3.48
GFRA4-203ENST00000477160 ACIN1Q9UKV3 1341 aaKnown RBP36.79■■■■□ 3.48
GFRA4-203ENST00000477160 NEXMIFQ5QGS0 1516 aa36.78■■■■□ 3.48
GFRA4-203ENST00000477160 KIF1BO60333 1816 aa36.78■■■■□ 3.48
GFRA4-203ENST00000477160 NRXN3Q9Y4C0 1643 aa36.75■■■■□ 3.47
GFRA4-203ENST00000477160 AMOTL2Q9Y2J4 779 aa36.75■■■■□ 3.47
GFRA4-203ENST00000477160 ILDR2Q71H61 639 aa36.73■■■■□ 3.47
GFRA4-203ENST00000477160 PTPRUQ92729 1446 aa36.73■■■■□ 3.47
GFRA4-203ENST00000477160 MPHOSPH9Q99550 1183 aa36.72■■■■□ 3.47
GFRA4-203ENST00000477160 RPGRIP1LQ68CZ1 1315 aa36.71■■■■□ 3.47
GFRA4-203ENST00000477160 C14orf37Q86TY3 774 aa36.71■■■■□ 3.47
GFRA4-203ENST00000477160 VGFO15240 615 aaPredicted RBP36.7■■■■□ 3.47
GFRA4-203ENST00000477160 SLAIN2Q9P270 581 aa36.7■■■■□ 3.47
GFRA4-203ENST00000477160 MED1Q15648 1581 aaPredicted RBP36.7■■■■□ 3.46
GFRA4-203ENST00000477160 FOXD1Q16676 465 aa36.69■■■■□ 3.46
GFRA4-203ENST00000477160 SETD5Q9C0A6 1442 aa36.68■■■■□ 3.46
GFRA4-203ENST00000477160 C19orf44Q9H6X5 657 aa36.67■■■■□ 3.46
GFRA4-203ENST00000477160 METP08581 1390 aa36.66■■■■□ 3.46
GFRA4-203ENST00000477160 ROBO1Q9Y6N7 1651 aa36.65■■■■□ 3.46
GFRA4-203ENST00000477160 CCDC144AA2RUR9 1427 aa36.63■■■■□ 3.45
GFRA4-203ENST00000477160 CADPS2Q86UW7 1296 aa36.63■■■■□ 3.45
GFRA4-203ENST00000477160 XRN1Q8IZH2 1706 aaKnown RBP36.62■■■■□ 3.45
GFRA4-203ENST00000477160 ATF3P18847 181 aa36.59■■■■□ 3.45
GFRA4-203ENST00000477160 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.56■■■■□ 3.44
GFRA4-203ENST00000477160 DCCP43146 1447 aa36.53■■■■□ 3.44
GFRA4-203ENST00000477160 RAB3GAP2Q9H2M9 1393 aa36.53■■■■□ 3.44
GFRA4-203ENST00000477160 PPLO60437 1756 aa36.51■■■■□ 3.44
GFRA4-203ENST00000477160 PHF23Q9BUL5 403 aaPredicted RBP36.51■■■■□ 3.44
GFRA4-203ENST00000477160 SPATA31E1Q6ZUB1 1445 aa36.51■■■■□ 3.43
GFRA4-203ENST00000477160 SOCS7O14512 581 aa36.48■■■■□ 3.43
GFRA4-203ENST00000477160 RGL3Q3MIN7 710 aa36.47■■■■□ 3.43
GFRA4-203ENST00000477160 ANKRD30BQ9BXX2 1392 aa36.46■■■■□ 3.43
GFRA4-203ENST00000477160 SETD1AO15047 1707 aaKnown RBP36.45■■■■□ 3.43
GFRA4-203ENST00000477160 PTCH1Q13635 1447 aa36.44■■■■□ 3.42
GFRA4-203ENST00000477160 ADGRL3Q9HAR2 1447 aa36.43■■■■□ 3.42
GFRA4-203ENST00000477160 PRAG1Q86YV5 1406 aa36.42■■■■□ 3.42
GFRA4-203ENST00000477160 PHLPP1O60346 1717 aa36.42■■■■□ 3.42
GFRA4-203ENST00000477160 ADGRF5Q8IZF2 1346 aa36.4■■■■□ 3.42
GFRA4-203ENST00000477160 JCADQ9P266 1359 aa36.38■■■■□ 3.41
GFRA4-203ENST00000477160 HRCP23327 699 aa36.37■■■■□ 3.41
GFRA4-203ENST00000477160 BRINP3Q76B58 766 aa36.37■■■■□ 3.41
GFRA4-203ENST00000477160 MST1RQ04912 1400 aa36.36■■■■□ 3.41
GFRA4-203ENST00000477160 ROBO2Q9HCK4 1378 aa36.36■■■■□ 3.41
GFRA4-203ENST00000477160 AHDC1Q5TGY3 1603 aaPredicted RBP36.35■■■■□ 3.41
GFRA4-203ENST00000477160 COL16A1Q07092 1604 aaPredicted RBP36.34■■■■□ 3.41
GFRA4-203ENST00000477160 IFT172Q9UG01 1749 aa36.33■■■■□ 3.41
GFRA4-203ENST00000477160 NALCNQ8IZF0 1738 aa36.31■■■■□ 3.4
GFRA4-203ENST00000477160 PIK3C2GO75747 1445 aa36.29■■■■□ 3.4
GFRA4-203ENST00000477160 ASXL1Q8IXJ9 1541 aa36.29■■■■□ 3.4
GFRA4-203ENST00000477160 RGS17Q9UGC6 210 aaPredicted RBP36.24■■■■□ 3.39
GFRA4-203ENST00000477160 SPATA31A6Q5VVP1 1343 aa36.23■■■■□ 3.39
GFRA4-203ENST00000477160 LRPPRCP42704 1394 aaKnown RBP36.23■■■■□ 3.39
GFRA4-203ENST00000477160 TECPR2O15040 1411 aa36.22■■■■□ 3.39
GFRA4-203ENST00000477160 MYOM2P54296 1465 aa36.21■■■■□ 3.39
GFRA4-203ENST00000477160 C1orf167Q5SNV9 1468 aa36.2■■■■□ 3.39
GFRA4-203ENST00000477160 NRXN1Q9ULB1 1477 aa36.19■■■■□ 3.38
GFRA4-203ENST00000477160 ABCC11Q96J66 1382 aa36.19■■■■□ 3.38
GFRA4-203ENST00000477160 C14orf93Q9H972 538 aaKnown RBP36.18■■■■□ 3.38
GFRA4-203ENST00000477160 STK26Q9P289 416 aa36.18■■■■□ 3.38
GFRA4-203ENST00000477160 TMEM132EQ6IEE7 984 aa36.17■■■■□ 3.38
GFRA4-203ENST00000477160 NHSL1Q5SYE7 1610 aa36.15■■■■□ 3.38
GFRA4-203ENST00000477160 SHPRHQ149N8 1683 aa36.14■■■■□ 3.38
GFRA4-203ENST00000477160 LRRC59Q96AG4 307 aaKnown RBP36.13■■■■□ 3.37
GFRA4-203ENST00000477160 YTHDC2Q9H6S0 1430 aaKnown RBP36.13■■■■□ 3.37
GFRA4-203ENST00000477160 WAPLQ7Z5K2 1190 aa36.1■■■■□ 3.37
GFRA4-203ENST00000477160 KNDC1Q76NI1 1749 aa36.1■■■■□ 3.37
GFRA4-203ENST00000477160 CDC42BPGQ6DT37 1551 aa36.1■■■■□ 3.37
GFRA4-203ENST00000477160 CFAP70Q5T0N1 1121 aa36.09■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms