RNA–Protein interactions for RNA: ENST00000476743.5

MSL3-213, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-213ENST00000476743 HDGFP51858 240 aaKnown RBP20.57■□□□□ 0.88
MSL3-213ENST00000476743 SETD5Q9C0A6 1442 aa20.57■□□□□ 0.88
MSL3-213ENST00000476743 LRRC7Q96NW7 1537 aa20.57■□□□□ 0.88
MSL3-213ENST00000476743 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.56■□□□□ 0.88
MSL3-213ENST00000476743 SLC4A1APQ9BWU0 796 aaKnown RBP20.56■□□□□ 0.88
MSL3-213ENST00000476743 CHGAP10645 457 aaKnown RBP20.55■□□□□ 0.88
MSL3-213ENST00000476743 KIF1BO60333 1816 aa20.55■□□□□ 0.88
MSL3-213ENST00000476743 NWD1Q149M9 1564 aa20.54■□□□□ 0.88
MSL3-213ENST00000476743 XIRP1Q702N8 1843 aaKnown RBP20.52■□□□□ 0.88
MSL3-213ENST00000476743 DIP2AQ14689 1571 aa20.51■□□□□ 0.87
MSL3-213ENST00000476743 SLC26A8Q96RN1 970 aa20.51■□□□□ 0.87
MSL3-213ENST00000476743 ADAMTS13Q76LX8 1427 aa20.51■□□□□ 0.87
MSL3-213ENST00000476743 CHD2O14647 1828 aaKnown RBP20.5■□□□□ 0.87
MSL3-213ENST00000476743 NEXMIFQ5QGS0 1516 aa20.5■□□□□ 0.87
MSL3-213ENST00000476743 PPP1R15AO75807 674 aaPredicted RBP20.5■□□□□ 0.87
MSL3-213ENST00000476743 ALKQ9UM73 1620 aa20.49■□□□□ 0.87
MSL3-213ENST00000476743 KCNA6P17658 529 aa20.49■□□□□ 0.87
MSL3-213ENST00000476743 MPHOSPH9Q99550 1183 aa20.49■□□□□ 0.87
MSL3-213ENST00000476743 RAB3GAP2Q9H2M9 1393 aa20.48■□□□□ 0.87
MSL3-213ENST00000476743 UBAP1LF5GYI3 381 aa20.48■□□□□ 0.87
MSL3-213ENST00000476743 TBX22Q9Y458 520 aa20.48■□□□□ 0.87
MSL3-213ENST00000476743 NRXN3Q9Y4C0 1643 aa20.48■□□□□ 0.87
MSL3-213ENST00000476743 NKTRP30414 1462 aaKnown RBP20.48■□□□□ 0.87
MSL3-213ENST00000476743 SETBP1Q9Y6X0 1596 aa20.47■□□□□ 0.87
MSL3-213ENST00000476743 NUTM2DQ5VT03 806 aaPredicted RBP20.45■□□□□ 0.86
MSL3-213ENST00000476743 PIK3R4Q99570 1358 aa20.45■□□□□ 0.86
MSL3-213ENST00000476743 FOXD1Q16676 465 aa20.44■□□□□ 0.86
MSL3-213ENST00000476743 BCANQ96GW7 911 aa20.44■□□□□ 0.86
MSL3-213ENST00000476743 TOM1O60784 492 aa20.43■□□□□ 0.86
MSL3-213ENST00000476743 HRCP23327 699 aa20.43■□□□□ 0.86
MSL3-213ENST00000476743 ZNF326Q5BKZ1 582 aaKnown RBP20.42■□□□□ 0.86
MSL3-213ENST00000476743 PPLO60437 1756 aa20.41■□□□□ 0.86
MSL3-213ENST00000476743 CCDC144AA2RUR9 1427 aa20.41■□□□□ 0.86
MSL3-213ENST00000476743 TMEM94Q12767 1356 aa20.4■□□□□ 0.86
MSL3-213ENST00000476743 RPGRIP1LQ68CZ1 1315 aa20.4■□□□□ 0.86
MSL3-213ENST00000476743 SPATA31E1Q6ZUB1 1445 aa20.39■□□□□ 0.85
MSL3-213ENST00000476743 SENP3Q9H4L4 574 aaPredicted RBP20.38■□□□□ 0.85
MSL3-213ENST00000476743 XRN1Q8IZH2 1706 aaKnown RBP20.37■□□□□ 0.85
MSL3-213ENST00000476743 PTPRUQ92729 1446 aa20.36■□□□□ 0.85
MSL3-213ENST00000476743 NCOA3Q9Y6Q9 1424 aa20.36■□□□□ 0.85
MSL3-213ENST00000476743 IFT172Q9UG01 1749 aa20.36■□□□□ 0.85
MSL3-213ENST00000476743 PROSER2Q86WR7 435 aaPredicted RBP20.36■□□□□ 0.85
MSL3-213ENST00000476743 SETD1AO15047 1707 aaKnown RBP20.36■□□□□ 0.85
MSL3-213ENST00000476743 VGFO15240 615 aaPredicted RBP20.34■□□□□ 0.85
MSL3-213ENST00000476743 METP08581 1390 aa20.33■□□□□ 0.84
MSL3-213ENST00000476743 PIP4K2BP78356 416 aa20.32■□□□□ 0.84
MSL3-213ENST00000476743 AMOTL2Q9Y2J4 779 aa20.3■□□□□ 0.84
MSL3-213ENST00000476743 RBM33Q96EV2 1170 aaKnown RBP20.29■□□□□ 0.84
MSL3-213ENST00000476743 MSH6P52701 1360 aa20.29■□□□□ 0.84
MSL3-213ENST00000476743 ANKRD30BQ9BXX2 1392 aa20.29■□□□□ 0.84
MSL3-213ENST00000476743 PRAG1Q86YV5 1406 aa20.28■□□□□ 0.84
MSL3-213ENST00000476743 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.84
MSL3-213ENST00000476743 FAM135BQ49AJ0 1406 aa20.27■□□□□ 0.83
MSL3-213ENST00000476743 HSPA1LP34931 641 aa20.26■□□□□ 0.83
MSL3-213ENST00000476743 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.25■□□□□ 0.83
MSL3-213ENST00000476743 ADGRF5Q8IZF2 1346 aa20.25■□□□□ 0.83
MSL3-213ENST00000476743 RGL3Q3MIN7 710 aa20.24■□□□□ 0.83
MSL3-213ENST00000476743 PIK3C2GO75747 1445 aa20.23■□□□□ 0.83
MSL3-213ENST00000476743 PTCH1Q13635 1447 aa20.23■□□□□ 0.83
MSL3-213ENST00000476743 MYOM2P54296 1465 aa20.23■□□□□ 0.83
MSL3-213ENST00000476743 NRXN1Q9ULB1 1477 aa20.23■□□□□ 0.83
MSL3-213ENST00000476743 ROBO1Q9Y6N7 1651 aa20.22■□□□□ 0.83
MSL3-213ENST00000476743 DCCP43146 1447 aa20.21■□□□□ 0.83
MSL3-213ENST00000476743 C19orf44Q9H6X5 657 aa20.21■□□□□ 0.83
MSL3-213ENST00000476743 SLAIN2Q9P270 581 aa20.18■□□□□ 0.82
MSL3-213ENST00000476743 NALCNQ8IZF0 1738 aa20.18■□□□□ 0.82
MSL3-213ENST00000476743 ASXL1Q8IXJ9 1541 aa20.17■□□□□ 0.82
MSL3-213ENST00000476743 CADPS2Q86UW7 1296 aa20.17■□□□□ 0.82
MSL3-213ENST00000476743 ADGRL3Q9HAR2 1447 aa20.17■□□□□ 0.82
MSL3-213ENST00000476743 LAMC1P11047 1609 aa20.16■□□□□ 0.82
MSL3-213ENST00000476743 C14orf37Q86TY3 774 aa20.16■□□□□ 0.82
MSL3-213ENST00000476743 ROBO2Q9HCK4 1378 aa20.16■□□□□ 0.82
MSL3-213ENST00000476743 TECPR2O15040 1411 aa20.16■□□□□ 0.82
MSL3-213ENST00000476743 KNDC1Q76NI1 1749 aa20.16■□□□□ 0.82
MSL3-213ENST00000476743 ATF3P18847 181 aa20.13■□□□□ 0.81
MSL3-213ENST00000476743 LRPPRCP42704 1394 aaKnown RBP20.12■□□□□ 0.81
MSL3-213ENST00000476743 C14orf93Q9H972 538 aaKnown RBP20.12■□□□□ 0.81
MSL3-213ENST00000476743 MST1RQ04912 1400 aa20.11■□□□□ 0.81
MSL3-213ENST00000476743 ABCC11Q96J66 1382 aa20.1■□□□□ 0.81
MSL3-213ENST00000476743 MED1Q15648 1581 aaPredicted RBP20.1■□□□□ 0.81
MSL3-213ENST00000476743 STAC3Q96MF2 364 aa20.1■□□□□ 0.81
MSL3-213ENST00000476743 PHLPP1O60346 1717 aa20.1■□□□□ 0.81
MSL3-213ENST00000476743 AHDC1Q5TGY3 1603 aaPredicted RBP20.09■□□□□ 0.81
MSL3-213ENST00000476743 DHX57Q6P158 1386 aaKnown RBP20.09■□□□□ 0.81
MSL3-213ENST00000476743 YTHDC2Q9H6S0 1430 aaKnown RBP20.08■□□□□ 0.8
MSL3-213ENST00000476743 DISP3Q9P2K9 1392 aa20.08■□□□□ 0.8
MSL3-213ENST00000476743 COL16A1Q07092 1604 aaPredicted RBP20.07■□□□□ 0.8
MSL3-213ENST00000476743 ADGRB1O14514 1584 aa20.06■□□□□ 0.8
MSL3-213ENST00000476743 CFAP70Q5T0N1 1121 aa20.06■□□□□ 0.8
MSL3-213ENST00000476743 CDC42BPGQ6DT37 1551 aa20.06■□□□□ 0.8
MSL3-213ENST00000476743 TMEM132EQ6IEE7 984 aa20.06■□□□□ 0.8
MSL3-213ENST00000476743 SIRT1Q96EB6 747 aa20.05■□□□□ 0.8
MSL3-213ENST00000476743 BRINP3Q76B58 766 aa20.04■□□□□ 0.8
MSL3-213ENST00000476743 DCAF11Q8TEB1 546 aa20.04■□□□□ 0.8
MSL3-213ENST00000476743 NHSL1Q5SYE7 1610 aa20.04■□□□□ 0.8
MSL3-213ENST00000476743 C1orf167Q5SNV9 1468 aa20.03■□□□□ 0.8
MSL3-213ENST00000476743 DLC1Q96QB1 1528 aa20.02■□□□□ 0.8
MSL3-213ENST00000476743 TRIM26Q12899 539 aaPredicted RBP20.02■□□□□ 0.8
MSL3-213ENST00000476743 STK26Q9P289 416 aa20.02■□□□□ 0.8
MSL3-213ENST00000476743 PLEKHH1Q9ULM0 1364 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms