RNA–Protein interactions for RNA: ENST00000476237.5

NMD3-208, Transcript of NMD3 ribosome export adaptor, human

TSL 5

Gene NMD3, Length 685 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NMD3-208	ENST00000476237	TOM1	O60784	492 aa		32.94	■■■□□ 2.86
NMD3-208	ENST00000476237	PPP1R15A	O75807	674 aa	Predicted RBP	32.93	■■■□□ 2.86
NMD3-208	ENST00000476237	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.93	■■■□□ 2.86
NMD3-208	ENST00000476237	PLEKHG1	Q9ULL1	1385 aa		32.93	■■■□□ 2.86
NMD3-208	ENST00000476237	BCAN	Q96GW7	911 aa		32.92	■■■□□ 2.86
NMD3-208	ENST00000476237	SPHKAP	Q2M3C7	1700 aa		32.91	■■■□□ 2.86
NMD3-208	ENST00000476237	KCNA6	P17658	529 aa		32.89	■■■□□ 2.86
NMD3-208	ENST00000476237	SENP3	Q9H4L4	574 aa	Predicted RBP	32.87	■■■□□ 2.85
NMD3-208	ENST00000476237	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.86	■■■□□ 2.85
NMD3-208	ENST00000476237	PIP4K2B	P78356	416 aa		32.85	■■■□□ 2.85
NMD3-208	ENST00000476237	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.85	■■■□□ 2.85
NMD3-208	ENST00000476237	TRPM2	O94759	1503 aa		32.82	■■■□□ 2.85
NMD3-208	ENST00000476237	SCAF1	Q9H7N4	1312 aa	Known RBP	32.82	■■■□□ 2.84
NMD3-208	ENST00000476237	ALK	Q9UM73	1620 aa		32.81	■■■□□ 2.84
NMD3-208	ENST00000476237	TBX22	Q9Y458	520 aa		32.81	■■■□□ 2.84
NMD3-208	ENST00000476237	CLTCL1	P53675	1640 aa		32.78	■■■□□ 2.84
NMD3-208	ENST00000476237	ADAMTS13	Q76LX8	1427 aa		32.77	■■■□□ 2.84
NMD3-208	ENST00000476237	NWD1	Q149M9	1564 aa		32.76	■■■□□ 2.84
NMD3-208	ENST00000476237	TMEM94	Q12767	1356 aa		32.76	■■■□□ 2.83
NMD3-208	ENST00000476237	ZNF326	Q5BKZ1	582 aa	Known RBP	32.76	■■■□□ 2.83
NMD3-208	ENST00000476237	PROSER2	Q86WR7	435 aa	Predicted RBP	32.76	■■■□□ 2.83
NMD3-208	ENST00000476237	XIRP1	Q702N8	1843 aa	Known RBP	32.74	■■■□□ 2.83
NMD3-208	ENST00000476237	NKTR	P30414	1462 aa	Known RBP	32.74	■■■□□ 2.83
NMD3-208	ENST00000476237	HSPA1L	P34931	641 aa		32.71	■■■□□ 2.83
NMD3-208	ENST00000476237	DIP2A	Q14689	1571 aa		32.7	■■■□□ 2.82
NMD3-208	ENST00000476237	RBM33	Q96EV2	1170 aa	Known RBP	32.69	■■■□□ 2.82
NMD3-208	ENST00000476237	SETD5	Q9C0A6	1442 aa		32.68	■■■□□ 2.82
NMD3-208	ENST00000476237	CHD2	O14647	1828 aa	Known RBP	32.68	■■■□□ 2.82
NMD3-208	ENST00000476237	FOXD1	Q16676	465 aa		32.68	■■■□□ 2.82
NMD3-208	ENST00000476237	MPHOSPH9	Q99550	1183 aa		32.68	■■■□□ 2.82
NMD3-208	ENST00000476237	PIK3R4	Q99570	1358 aa		32.68	■■■□□ 2.82
NMD3-208	ENST00000476237	ACIN1	Q9UKV3	1341 aa	Known RBP	32.66	■■■□□ 2.82
NMD3-208	ENST00000476237	KIF1B	O60333	1816 aa		32.65	■■■□□ 2.82
NMD3-208	ENST00000476237	NEXMIF	Q5QGS0	1516 aa		32.64	■■■□□ 2.82
NMD3-208	ENST00000476237	SETBP1	Q9Y6X0	1596 aa		32.62	■■■□□ 2.81
NMD3-208	ENST00000476237	NRXN3	Q9Y4C0	1643 aa		32.6	■■■□□ 2.81
NMD3-208	ENST00000476237	AMOTL2	Q9Y2J4	779 aa		32.58	■■■□□ 2.81
NMD3-208	ENST00000476237	PTPRU	Q92729	1446 aa		32.58	■■■□□ 2.81
NMD3-208	ENST00000476237	DISP3	Q9P2K9	1392 aa		32.58	■■■□□ 2.81
NMD3-208	ENST00000476237	RPGRIP1L	Q68CZ1	1315 aa		32.57	■■■□□ 2.8
NMD3-208	ENST00000476237	MSH6	P52701	1360 aa		32.57	■■■□□ 2.8
NMD3-208	ENST00000476237	NCOA3	Q9Y6Q9	1424 aa		32.56	■■■□□ 2.8
NMD3-208	ENST00000476237	RAB3GAP2	Q9H2M9	1393 aa		32.56	■■■□□ 2.8
NMD3-208	ENST00000476237	VGF	O15240	615 aa	Predicted RBP	32.55	■■■□□ 2.8
NMD3-208	ENST00000476237	CCDC144A	A2RUR9	1427 aa		32.54	■■■□□ 2.8
NMD3-208	ENST00000476237	FAM135B	Q49AJ0	1406 aa		32.53	■■■□□ 2.8
NMD3-208	ENST00000476237	MET	P08581	1390 aa		32.52	■■■□□ 2.8
NMD3-208	ENST00000476237	C14orf37	Q86TY3	774 aa		32.47	■■■□□ 2.79
NMD3-208	ENST00000476237	SLAIN2	Q9P270	581 aa		32.46	■■■□□ 2.79
NMD3-208	ENST00000476237	SPATA31E1	Q6ZUB1	1445 aa		32.45	■■■□□ 2.79
NMD3-208	ENST00000476237	C19orf44	Q9H6X5	657 aa		32.45	■■■□□ 2.79
NMD3-208	ENST00000476237	XRN1	Q8IZH2	1706 aa	Known RBP	32.45	■■■□□ 2.78
NMD3-208	ENST00000476237	RGL3	Q3MIN7	710 aa		32.43	■■■□□ 2.78
NMD3-208	ENST00000476237	PPL	O60437	1756 aa		32.42	■■■□□ 2.78
NMD3-208	ENST00000476237	HRC	P23327	699 aa		32.4	■■■□□ 2.78
NMD3-208	ENST00000476237	CADPS2	Q86UW7	1296 aa		32.39	■■■□□ 2.78
NMD3-208	ENST00000476237	ROBO1	Q9Y6N7	1651 aa		32.39	■■■□□ 2.78
NMD3-208	ENST00000476237	ATF3	P18847	181 aa		32.37	■■■□□ 2.77
NMD3-208	ENST00000476237	ADGRF5	Q8IZF2	1346 aa		32.36	■■■□□ 2.77
NMD3-208	ENST00000476237	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.36	■■■□□ 2.77
NMD3-208	ENST00000476237	ANKRD30B	Q9BXX2	1392 aa		32.35	■■■□□ 2.77
NMD3-208	ENST00000476237	SETD1A	O15047	1707 aa	Known RBP	32.34	■■■□□ 2.77
NMD3-208	ENST00000476237	MED1	Q15648	1581 aa	Predicted RBP	32.33	■■■□□ 2.77
NMD3-208	ENST00000476237	ILDR2	Q71H61	639 aa		32.32	■■■□□ 2.76
NMD3-208	ENST00000476237	DCC	P43146	1447 aa		32.3	■■■□□ 2.76
NMD3-208	ENST00000476237	IFT172	Q9UG01	1749 aa		32.28	■■■□□ 2.76
NMD3-208	ENST00000476237	PTCH1	Q13635	1447 aa		32.27	■■■□□ 2.76
NMD3-208	ENST00000476237	PRAG1	Q86YV5	1406 aa		32.26	■■■□□ 2.76
NMD3-208	ENST00000476237	ROBO2	Q9HCK4	1378 aa		32.26	■■■□□ 2.75
NMD3-208	ENST00000476237	ADGRL3	Q9HAR2	1447 aa		32.26	■■■□□ 2.75
NMD3-208	ENST00000476237	PIK3C2G	O75747	1445 aa		32.22	■■■□□ 2.75
NMD3-208	ENST00000476237	MST1R	Q04912	1400 aa		32.19	■■■□□ 2.74
NMD3-208	ENST00000476237	BRINP3	Q76B58	766 aa		32.19	■■■□□ 2.74
NMD3-208	ENST00000476237	PHLPP1	O60346	1717 aa		32.18	■■■□□ 2.74
NMD3-208	ENST00000476237	NALCN	Q8IZF0	1738 aa		32.17	■■■□□ 2.74
NMD3-208	ENST00000476237	TMEM132E	Q6IEE7	984 aa		32.15	■■■□□ 2.74
NMD3-208	ENST00000476237	MYOM2	P54296	1465 aa		32.15	■■■□□ 2.74
NMD3-208	ENST00000476237	NRXN1	Q9ULB1	1477 aa		32.15	■■■□□ 2.74
NMD3-208	ENST00000476237	PHF23	Q9BUL5	403 aa	Predicted RBP	32.14	■■■□□ 2.74
NMD3-208	ENST00000476237	C14orf93	Q9H972	538 aa	Known RBP	32.14	■■■□□ 2.74
NMD3-208	ENST00000476237	LRPPRC	P42704	1394 aa	Known RBP	32.14	■■■□□ 2.74
NMD3-208	ENST00000476237	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.13	■■■□□ 2.73
NMD3-208	ENST00000476237	STK26	Q9P289	416 aa		32.13	■■■□□ 2.73
NMD3-208	ENST00000476237	COL16A1	Q07092	1604 aa	Predicted RBP	32.12	■■■□□ 2.73
NMD3-208	ENST00000476237	ASXL1	Q8IXJ9	1541 aa		32.12	■■■□□ 2.73
NMD3-208	ENST00000476237	JCAD	Q9P266	1359 aa		32.12	■■■□□ 2.73
NMD3-208	ENST00000476237	TECPR2	O15040	1411 aa		32.11	■■■□□ 2.73
NMD3-208	ENST00000476237	ABCC11	Q96J66	1382 aa		32.11	■■■□□ 2.73
NMD3-208	ENST00000476237	CFAP70	Q5T0N1	1121 aa		32.08	■■■□□ 2.73
NMD3-208	ENST00000476237	C1orf167	Q5SNV9	1468 aa		32.06	■■■□□ 2.72
NMD3-208	ENST00000476237	WAPL	Q7Z5K2	1190 aa		32.06	■■■□□ 2.72
NMD3-208	ENST00000476237	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.06	■■■□□ 2.72
NMD3-208	ENST00000476237	SOCS7	O14512	581 aa		32.02	■■■□□ 2.72
NMD3-208	ENST00000476237	DCAF11	Q8TEB1	546 aa		32.02	■■■□□ 2.72
NMD3-208	ENST00000476237	KNDC1	Q76NI1	1749 aa		32.01	■■■□□ 2.72
NMD3-208	ENST00000476237	SIRT1	Q96EB6	747 aa		32.01	■■■□□ 2.71
NMD3-208	ENST00000476237	KDM2A	Q9Y2K7	1162 aa		32.01	■■■□□ 2.71
NMD3-208	ENST00000476237	DHX57	Q6P158	1386 aa	Known RBP	32.01	■■■□□ 2.71
NMD3-208	ENST00000476237	LAMC1	P11047	1609 aa		32	■■■□□ 2.71
NMD3-208	ENST00000476237	PLEKHH1	Q9ULM0	1364 aa		32	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms