RNA–Protein interactions for RNA: ENST00000476126.1

SP140-209, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 463 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-209ENST00000476126 NAIPQ13075 1403 aa10.48□□□□□ -0.73
SP140-209ENST00000476126 CLTCL1P53675 1640 aa10.47□□□□□ -0.73
SP140-209ENST00000476126 BCANQ96GW7 911 aa10.47□□□□□ -0.73
SP140-209ENST00000476126 SCAF1Q9H7N4 1312 aaKnown RBP10.47□□□□□ -0.73
SP140-209ENST00000476126 PPP1R15AO75807 674 aaPredicted RBP10.46□□□□□ -0.73
SP140-209ENST00000476126 LTKP29376 864 aa10.46□□□□□ -0.73
SP140-209ENST00000476126 HFM1A2PYH4 1435 aa10.46□□□□□ -0.74
SP140-209ENST00000476126 NWD1Q149M9 1564 aa10.46□□□□□ -0.74
SP140-209ENST00000476126 TRPM2O94759 1503 aa10.45□□□□□ -0.74
SP140-209ENST00000476126 LRRC7Q96NW7 1537 aa10.45□□□□□ -0.74
SP140-209ENST00000476126 RIMS2Q9UQ26 1411 aa10.45□□□□□ -0.74
SP140-209ENST00000476126 DIP2AQ14689 1571 aa10.44□□□□□ -0.74
SP140-209ENST00000476126 TRIM52Q96A61 297 aa10.44□□□□□ -0.74
SP140-209ENST00000476126 ZFYVE9O95405 1425 aa10.43□□□□□ -0.74
SP140-209ENST00000476126 TOM1O60784 492 aa10.43□□□□□ -0.74
SP140-209ENST00000476126 PPLO60437 1756 aa10.42□□□□□ -0.74
SP140-209ENST00000476126 HDGFP51858 240 aaKnown RBP10.42□□□□□ -0.74
SP140-209ENST00000476126 PIP4K2BP78356 416 aa10.42□□□□□ -0.74
SP140-209ENST00000476126 NKTRP30414 1462 aaKnown RBP10.42□□□□□ -0.74
SP140-209ENST00000476126 PLEKHG1Q9ULL1 1385 aa10.41□□□□□ -0.74
SP140-209ENST00000476126 PIAS4Q8N2W9 510 aaPredicted RBP10.41□□□□□ -0.74
SP140-209ENST00000476126 SLC26A8Q96RN1 970 aa10.41□□□□□ -0.74
SP140-209ENST00000476126 ALKQ9UM73 1620 aa10.4□□□□□ -0.74
SP140-209ENST00000476126 NRXN3Q9Y4C0 1643 aa10.4□□□□□ -0.74
SP140-209ENST00000476126 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.4□□□□□ -0.74
SP140-209ENST00000476126 NEXMIFQ5QGS0 1516 aa10.39□□□□□ -0.75
SP140-209ENST00000476126 ADRA2BP18089 450 aa10.39□□□□□ -0.75
SP140-209ENST00000476126 ZNF326Q5BKZ1 582 aaKnown RBP10.39□□□□□ -0.75
SP140-209ENST00000476126 NUTM2DQ5VT03 806 aaPredicted RBP10.39□□□□□ -0.75
SP140-209ENST00000476126 IFT172Q9UG01 1749 aa10.38□□□□□ -0.75
SP140-209ENST00000476126 ROBO1Q9Y6N7 1651 aa10.38□□□□□ -0.75
SP140-209ENST00000476126 SETBP1Q9Y6X0 1596 aa10.38□□□□□ -0.75
SP140-209ENST00000476126 XRN1Q8IZH2 1706 aaKnown RBP10.37□□□□□ -0.75
SP140-209ENST00000476126 SLC4A1APQ9BWU0 796 aaKnown RBP10.37□□□□□ -0.75
SP140-209ENST00000476126 TMEM94Q12767 1356 aa10.37□□□□□ -0.75
SP140-209ENST00000476126 DISP3Q9P2K9 1392 aa10.37□□□□□ -0.75
SP140-209ENST00000476126 SETD1AO15047 1707 aaKnown RBP10.36□□□□□ -0.75
SP140-209ENST00000476126 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.36□□□□□ -0.75
SP140-209ENST00000476126 KCNA6P17658 529 aa10.36□□□□□ -0.75
SP140-209ENST00000476126 PROSER2Q86WR7 435 aaPredicted RBP10.36□□□□□ -0.75
SP140-209ENST00000476126 PHLPP1O60346 1717 aa10.36□□□□□ -0.75
SP140-209ENST00000476126 ADAMTS13Q76LX8 1427 aa10.35□□□□□ -0.75
SP140-209ENST00000476126 MED1Q15648 1581 aaPredicted RBP10.35□□□□□ -0.75
SP140-209ENST00000476126 NALCNQ8IZF0 1738 aa10.34□□□□□ -0.75
SP140-209ENST00000476126 MSH6P52701 1360 aa10.34□□□□□ -0.75
SP140-209ENST00000476126 HSPA1LP34931 641 aa10.33□□□□□ -0.76
SP140-209ENST00000476126 C14orf37Q86TY3 774 aa10.33□□□□□ -0.76
SP140-209ENST00000476126 RBM33Q96EV2 1170 aaKnown RBP10.33□□□□□ -0.76
SP140-209ENST00000476126 CCDC144AA2RUR9 1427 aa10.33□□□□□ -0.76
SP140-209ENST00000476126 SETD5Q9C0A6 1442 aa10.33□□□□□ -0.76
SP140-209ENST00000476126 PIK3R4Q99570 1358 aa10.32□□□□□ -0.76
SP140-209ENST00000476126 TBX22Q9Y458 520 aa10.32□□□□□ -0.76
SP140-209ENST00000476126 ACIN1Q9UKV3 1341 aaKnown RBP10.3□□□□□ -0.76
SP140-209ENST00000476126 RAB3GAP2Q9H2M9 1393 aa10.29□□□□□ -0.76
SP140-209ENST00000476126 MPHOSPH9Q99550 1183 aa10.29□□□□□ -0.76
SP140-209ENST00000476126 PTPRUQ92729 1446 aa10.29□□□□□ -0.76
SP140-209ENST00000476126 KNDC1Q76NI1 1749 aa10.29□□□□□ -0.76
SP140-209ENST00000476126 LAMC1P11047 1609 aa10.29□□□□□ -0.76
SP140-209ENST00000476126 AMOTL2Q9Y2J4 779 aa10.28□□□□□ -0.76
SP140-209ENST00000476126 NCOA3Q9Y6Q9 1424 aa10.27□□□□□ -0.77
SP140-209ENST00000476126 COL16A1Q07092 1604 aaPredicted RBP10.26□□□□□ -0.77
SP140-209ENST00000476126 FAM135BQ49AJ0 1406 aa10.26□□□□□ -0.77
SP140-209ENST00000476126 VGFO15240 615 aaPredicted RBP10.26□□□□□ -0.77
SP140-209ENST00000476126 RPGRIP1LQ68CZ1 1315 aa10.26□□□□□ -0.77
SP140-209ENST00000476126 METP08581 1390 aa10.26□□□□□ -0.77
SP140-209ENST00000476126 NHSL1Q5SYE7 1610 aa10.25□□□□□ -0.77
SP140-209ENST00000476126 ATF3P18847 181 aa10.25□□□□□ -0.77
SP140-209ENST00000476126 RGL3Q3MIN7 710 aa10.25□□□□□ -0.77
SP140-209ENST00000476126 SHPRHQ149N8 1683 aa10.25□□□□□ -0.77
SP140-209ENST00000476126 DCCP43146 1447 aa10.24□□□□□ -0.77
SP140-209ENST00000476126 CADPS2Q86UW7 1296 aa10.24□□□□□ -0.77
SP140-209ENST00000476126 AHDC1Q5TGY3 1603 aaPredicted RBP10.24□□□□□ -0.77
SP140-209ENST00000476126 SPATA31E1Q6ZUB1 1445 aa10.24□□□□□ -0.77
SP140-209ENST00000476126 ADGRL3Q9HAR2 1447 aa10.24□□□□□ -0.77
SP140-209ENST00000476126 SLAIN2Q9P270 581 aa10.23□□□□□ -0.77
SP140-209ENST00000476126 ANKRD30BQ9BXX2 1392 aa10.23□□□□□ -0.77
SP140-209ENST00000476126 PTCH1Q13635 1447 aa10.23□□□□□ -0.77
SP140-209ENST00000476126 C19orf44Q9H6X5 657 aa10.22□□□□□ -0.77
SP140-209ENST00000476126 ASXL1Q8IXJ9 1541 aa10.22□□□□□ -0.77
SP140-209ENST00000476126 RGPD8O14715 1765 aaPredicted RBP10.21□□□□□ -0.77
SP140-209ENST00000476126 MYOM2P54296 1465 aa10.21□□□□□ -0.78
SP140-209ENST00000476126 PIK3C2GO75747 1445 aa10.2□□□□□ -0.78
SP140-209ENST00000476126 MST1RQ04912 1400 aa10.2□□□□□ -0.78
SP140-209ENST00000476126 CDC42BPGQ6DT37 1551 aa10.2□□□□□ -0.78
SP140-209ENST00000476126 ILDR2Q71H61 639 aa10.2□□□□□ -0.78
SP140-209ENST00000476126 FMN2Q9NZ56 1722 aa10.2□□□□□ -0.78
SP140-209ENST00000476126 ADGRF5Q8IZF2 1346 aa10.19□□□□□ -0.78
SP140-209ENST00000476126 PRAG1Q86YV5 1406 aa10.18□□□□□ -0.78
SP140-209ENST00000476126 ROBO2Q9HCK4 1378 aa10.18□□□□□ -0.78
SP140-209ENST00000476126 JCADQ9P266 1359 aa10.17□□□□□ -0.78
SP140-209ENST00000476126 KIF1AQ12756 1690 aa10.16□□□□□ -0.78
SP140-209ENST00000476126 STK26Q9P289 416 aa10.16□□□□□ -0.78
SP140-209ENST00000476126 NRXN1Q9ULB1 1477 aa10.16□□□□□ -0.78
SP140-209ENST00000476126 ARHGEF28Q8N1W1 1705 aaKnown RBP10.16□□□□□ -0.78
SP140-209ENST00000476126 MARF1Q9Y4F3 1742 aaKnown RBP10.16□□□□□ -0.78
SP140-209ENST00000476126 TECPR2O15040 1411 aa10.16□□□□□ -0.78
SP140-209ENST00000476126 BRINP3Q76B58 766 aa10.15□□□□□ -0.78
SP140-209ENST00000476126 KIAA1210Q9ULL0 1709 aa10.15□□□□□ -0.78
SP140-209ENST00000476126 C1orf167Q5SNV9 1468 aa10.15□□□□□ -0.78
SP140-209ENST00000476126 YTHDC2Q9H6S0 1430 aaKnown RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms