RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 ZFYVE9O95405 1425 aa14.13□□□□□ -0.15
SEMA3C-208ENST00000475955 CENPBP07199 599 aaPredicted RBP14.12□□□□□ -0.15
SEMA3C-208ENST00000475955 EID1Q9Y6B2 187 aa14.12□□□□□ -0.15
SEMA3C-208ENST00000475955 HFM1A2PYH4 1435 aa14.11□□□□□ -0.15
SEMA3C-208ENST00000475955 UBAP1LF5GYI3 381 aa14.11□□□□□ -0.15
SEMA3C-208ENST00000475955 RIMS2Q9UQ26 1411 aa14.09□□□□□ -0.15
SEMA3C-208ENST00000475955 CHD2O14647 1828 aaKnown RBP14.09□□□□□ -0.15
SEMA3C-208ENST00000475955 CLTCL1P53675 1640 aa14.08□□□□□ -0.15
SEMA3C-208ENST00000475955 SLC26A8Q96RN1 970 aa14.08□□□□□ -0.16
SEMA3C-208ENST00000475955 SENP3Q9H4L4 574 aaPredicted RBP14.08□□□□□ -0.16
SEMA3C-208ENST00000475955 CHGAP10645 457 aaKnown RBP14.06□□□□□ -0.16
SEMA3C-208ENST00000475955 NUTM2DQ5VT03 806 aaPredicted RBP14.06□□□□□ -0.16
SEMA3C-208ENST00000475955 KIF1BO60333 1816 aa14.06□□□□□ -0.16
SEMA3C-208ENST00000475955 NWD1Q149M9 1564 aa14.05□□□□□ -0.16
SEMA3C-208ENST00000475955 DIEXFQ68CQ4 756 aaKnown RBP14.05□□□□□ -0.16
SEMA3C-208ENST00000475955 PLEKHG1Q9ULL1 1385 aa14.05□□□□□ -0.16
SEMA3C-208ENST00000475955 TRPM2O94759 1503 aa14.05□□□□□ -0.16
SEMA3C-208ENST00000475955 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
SEMA3C-208ENST00000475955 ACIN1Q9UKV3 1341 aaKnown RBP14.04□□□□□ -0.16
SEMA3C-208ENST00000475955 PIP4K2BP78356 416 aa14.03□□□□□ -0.16
SEMA3C-208ENST00000475955 ADAMTS13Q76LX8 1427 aa14.03□□□□□ -0.16
SEMA3C-208ENST00000475955 NRXN3Q9Y4C0 1643 aa14.03□□□□□ -0.16
SEMA3C-208ENST00000475955 KCNA6P17658 529 aa14.02□□□□□ -0.17
SEMA3C-208ENST00000475955 TRIM52Q96A61 297 aa14.02□□□□□ -0.17
SEMA3C-208ENST00000475955 TOM1O60784 492 aa14.01□□□□□ -0.17
SEMA3C-208ENST00000475955 RBM33Q96EV2 1170 aaKnown RBP14.01□□□□□ -0.17
SEMA3C-208ENST00000475955 PPP1R15AO75807 674 aaPredicted RBP14□□□□□ -0.17
SEMA3C-208ENST00000475955 BCANQ96GW7 911 aa14□□□□□ -0.17
SEMA3C-208ENST00000475955 NEXMIFQ5QGS0 1516 aa14□□□□□ -0.17
SEMA3C-208ENST00000475955 TMEM94Q12767 1356 aa13.99□□□□□ -0.17
SEMA3C-208ENST00000475955 ZNF316A6NFI3 1004 aaPredicted RBP13.99□□□□□ -0.17
SEMA3C-208ENST00000475955 HSPA1LP34931 641 aa13.99□□□□□ -0.17
SEMA3C-208ENST00000475955 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.99□□□□□ -0.17
SEMA3C-208ENST00000475955 NKTRP30414 1462 aaKnown RBP13.99□□□□□ -0.17
SEMA3C-208ENST00000475955 DIP2AQ14689 1571 aa13.98□□□□□ -0.17
SEMA3C-208ENST00000475955 HDGFP51858 240 aaKnown RBP13.98□□□□□ -0.17
SEMA3C-208ENST00000475955 FOXD1Q16676 465 aa13.98□□□□□ -0.17
SEMA3C-208ENST00000475955 SLC4A1APQ9BWU0 796 aaKnown RBP13.98□□□□□ -0.17
SEMA3C-208ENST00000475955 TBX22Q9Y458 520 aa13.98□□□□□ -0.17
SEMA3C-208ENST00000475955 SETBP1Q9Y6X0 1596 aa13.97□□□□□ -0.17
SEMA3C-208ENST00000475955 CLSPNQ9HAW4 1339 aa13.97□□□□□ -0.17
SEMA3C-208ENST00000475955 PROSER2Q86WR7 435 aaPredicted RBP13.97□□□□□ -0.17
SEMA3C-208ENST00000475955 PPLO60437 1756 aa13.96□□□□□ -0.17
SEMA3C-208ENST00000475955 PTPRUQ92729 1446 aa13.96□□□□□ -0.18
SEMA3C-208ENST00000475955 SETD1AO15047 1707 aaKnown RBP13.95□□□□□ -0.18
SEMA3C-208ENST00000475955 XRN1Q8IZH2 1706 aaKnown RBP13.95□□□□□ -0.18
SEMA3C-208ENST00000475955 ZNF326Q5BKZ1 582 aaKnown RBP13.94□□□□□ -0.18
SEMA3C-208ENST00000475955 SETD5Q9C0A6 1442 aa13.93□□□□□ -0.18
SEMA3C-208ENST00000475955 MPHOSPH9Q99550 1183 aa13.93□□□□□ -0.18
SEMA3C-208ENST00000475955 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.93□□□□□ -0.18
SEMA3C-208ENST00000475955 ROBO1Q9Y6N7 1651 aa13.92□□□□□ -0.18
SEMA3C-208ENST00000475955 PIK3R4Q99570 1358 aa13.92□□□□□ -0.18
SEMA3C-208ENST00000475955 DISP3Q9P2K9 1392 aa13.92□□□□□ -0.18
SEMA3C-208ENST00000475955 IFT172Q9UG01 1749 aa13.92□□□□□ -0.18
SEMA3C-208ENST00000475955 METP08581 1390 aa13.91□□□□□ -0.18
SEMA3C-208ENST00000475955 AMOTL2Q9Y2J4 779 aa13.9□□□□□ -0.18
SEMA3C-208ENST00000475955 RAB3GAP2Q9H2M9 1393 aa13.89□□□□□ -0.19
SEMA3C-208ENST00000475955 ILDR2Q71H61 639 aa13.89□□□□□ -0.19
SEMA3C-208ENST00000475955 FAM135BQ49AJ0 1406 aa13.89□□□□□ -0.19
SEMA3C-208ENST00000475955 MED1Q15648 1581 aaPredicted RBP13.88□□□□□ -0.19
SEMA3C-208ENST00000475955 SPATA31E1Q6ZUB1 1445 aa13.88□□□□□ -0.19
SEMA3C-208ENST00000475955 MSH6P52701 1360 aa13.87□□□□□ -0.19
SEMA3C-208ENST00000475955 NCOA3Q9Y6Q9 1424 aa13.87□□□□□ -0.19
SEMA3C-208ENST00000475955 MYT1Q01538 1121 aa13.86□□□□□ -0.19
SEMA3C-208ENST00000475955 CCDC144AA2RUR9 1427 aa13.86□□□□□ -0.19
SEMA3C-208ENST00000475955 NALCNQ8IZF0 1738 aa13.85□□□□□ -0.19
SEMA3C-208ENST00000475955 NEUROD1Q13562 356 aa13.85□□□□□ -0.19
SEMA3C-208ENST00000475955 RPGRIP1LQ68CZ1 1315 aa13.85□□□□□ -0.19
SEMA3C-208ENST00000475955 VGFO15240 615 aaPredicted RBP13.84□□□□□ -0.19
SEMA3C-208ENST00000475955 SLAIN2Q9P270 581 aa13.84□□□□□ -0.19
SEMA3C-208ENST00000475955 PHLPP1O60346 1717 aa13.84□□□□□ -0.19
SEMA3C-208ENST00000475955 RGL3Q3MIN7 710 aa13.83□□□□□ -0.2
SEMA3C-208ENST00000475955 ADGRF5Q8IZF2 1346 aa13.83□□□□□ -0.2
SEMA3C-208ENST00000475955 C19orf44Q9H6X5 657 aa13.82□□□□□ -0.2
SEMA3C-208ENST00000475955 C14orf37Q86TY3 774 aa13.81□□□□□ -0.2
SEMA3C-208ENST00000475955 ASXL1Q8IXJ9 1541 aa13.8□□□□□ -0.2
SEMA3C-208ENST00000475955 COL16A1Q07092 1604 aaPredicted RBP13.8□□□□□ -0.2
SEMA3C-208ENST00000475955 ROBO2Q9HCK4 1378 aa13.8□□□□□ -0.2
SEMA3C-208ENST00000475955 PRAG1Q86YV5 1406 aa13.79□□□□□ -0.2
SEMA3C-208ENST00000475955 CADPS2Q86UW7 1296 aa13.78□□□□□ -0.2
SEMA3C-208ENST00000475955 ANKRD30BQ9BXX2 1392 aa13.78□□□□□ -0.2
SEMA3C-208ENST00000475955 DCCP43146 1447 aa13.78□□□□□ -0.2
SEMA3C-208ENST00000475955 MST1RQ04912 1400 aa13.78□□□□□ -0.2
SEMA3C-208ENST00000475955 PTCH1Q13635 1447 aa13.78□□□□□ -0.2
SEMA3C-208ENST00000475955 ADGRL3Q9HAR2 1447 aa13.78□□□□□ -0.2
SEMA3C-208ENST00000475955 PIK3C2GO75747 1445 aa13.77□□□□□ -0.21
SEMA3C-208ENST00000475955 ATF3P18847 181 aa13.77□□□□□ -0.21
SEMA3C-208ENST00000475955 AHDC1Q5TGY3 1603 aaPredicted RBP13.77□□□□□ -0.21
SEMA3C-208ENST00000475955 GTF3C3Q9Y5Q9 886 aa13.77□□□□□ -0.21
SEMA3C-208ENST00000475955 NHSL1Q5SYE7 1610 aa13.76□□□□□ -0.21
SEMA3C-208ENST00000475955 KNDC1Q76NI1 1749 aa13.76□□□□□ -0.21
SEMA3C-208ENST00000475955 NRXN1Q9ULB1 1477 aa13.75□□□□□ -0.21
SEMA3C-208ENST00000475955 BRINP3Q76B58 766 aa13.75□□□□□ -0.21
SEMA3C-208ENST00000475955 TMEM132EQ6IEE7 984 aa13.73□□□□□ -0.21
SEMA3C-208ENST00000475955 RGS17Q9UGC6 210 aaPredicted RBP13.73□□□□□ -0.21
SEMA3C-208ENST00000475955 MYOM2P54296 1465 aa13.73□□□□□ -0.21
SEMA3C-208ENST00000475955 SHPRHQ149N8 1683 aa13.72□□□□□ -0.21
SEMA3C-208ENST00000475955 TECPR2O15040 1411 aa13.72□□□□□ -0.21
SEMA3C-208ENST00000475955 LRPPRCP42704 1394 aaKnown RBP13.71□□□□□ -0.21
SEMA3C-208ENST00000475955 STK26Q9P289 416 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms