RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 NUTM2DQ5VT03 806 aaPredicted RBP17.25■□□□□ 0.35
BRD9-203ENST00000475706 STRCP1A6NGW2 1772 aa17.25■□□□□ 0.35
BRD9-203ENST00000475706 CLTCL1P53675 1640 aa17.25■□□□□ 0.35
BRD9-203ENST00000475706 FOXD1Q16676 465 aa17.24■□□□□ 0.35
BRD9-203ENST00000475706 ZNF326Q5BKZ1 582 aaKnown RBP17.24■□□□□ 0.35
BRD9-203ENST00000475706 MPHOSPH9Q99550 1183 aa17.23■□□□□ 0.35
BRD9-203ENST00000475706 TRPM2O94759 1503 aa17.22■□□□□ 0.35
BRD9-203ENST00000475706 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.22■□□□□ 0.35
BRD9-203ENST00000475706 SLC26A8Q96RN1 970 aa17.22■□□□□ 0.35
BRD9-203ENST00000475706 ZFYVE9O95405 1425 aa17.21■□□□□ 0.35
BRD9-203ENST00000475706 CPS1P31327 1500 aa17.21■□□□□ 0.35
BRD9-203ENST00000475706 RAB3GAP2Q9H2M9 1393 aa17.21■□□□□ 0.35
BRD9-203ENST00000475706 ACIN1Q9UKV3 1341 aaKnown RBP17.21■□□□□ 0.34
BRD9-203ENST00000475706 IQSEC2Q5JU85 1478 aa17.2■□□□□ 0.34
BRD9-203ENST00000475706 PLEKHG1Q9ULL1 1385 aa17.17■□□□□ 0.34
BRD9-203ENST00000475706 UBAP1LF5GYI3 381 aa17.17■□□□□ 0.34
BRD9-203ENST00000475706 CHD2O14647 1828 aaKnown RBP17.14■□□□□ 0.34
BRD9-203ENST00000475706 LRRC7Q96NW7 1537 aa17.13■□□□□ 0.33
BRD9-203ENST00000475706 XIRP1Q702N8 1843 aaKnown RBP17.13■□□□□ 0.33
BRD9-203ENST00000475706 KCNA6P17658 529 aa17.13■□□□□ 0.33
BRD9-203ENST00000475706 CCDC144AA2RUR9 1427 aa17.13■□□□□ 0.33
BRD9-203ENST00000475706 PROSER2Q86WR7 435 aaPredicted RBP17.11■□□□□ 0.33
BRD9-203ENST00000475706 TBX22Q9Y458 520 aa17.11■□□□□ 0.33
BRD9-203ENST00000475706 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
BRD9-203ENST00000475706 NEXMIFQ5QGS0 1516 aa17.11■□□□□ 0.33
BRD9-203ENST00000475706 PPLO60437 1756 aa17.1■□□□□ 0.33
BRD9-203ENST00000475706 TOM1O60784 492 aa17.09■□□□□ 0.33
BRD9-203ENST00000475706 HRCP23327 699 aa17.09■□□□□ 0.33
BRD9-203ENST00000475706 RGL3Q3MIN7 710 aa17.09■□□□□ 0.33
BRD9-203ENST00000475706 ADAMTS13Q76LX8 1427 aa17.09■□□□□ 0.33
BRD9-203ENST00000475706 DIP2AQ14689 1571 aa17.08■□□□□ 0.32
BRD9-203ENST00000475706 PIP4K2BP78356 416 aa17.08■□□□□ 0.32
BRD9-203ENST00000475706 NWD1Q149M9 1564 aa17.07■□□□□ 0.32
BRD9-203ENST00000475706 RPGRIP1LQ68CZ1 1315 aa17.07■□□□□ 0.32
BRD9-203ENST00000475706 RBM33Q96EV2 1170 aaKnown RBP17.07■□□□□ 0.32
BRD9-203ENST00000475706 NRXN3Q9Y4C0 1643 aa17.07■□□□□ 0.32
BRD9-203ENST00000475706 VGFO15240 615 aaPredicted RBP17.06■□□□□ 0.32
BRD9-203ENST00000475706 TMEM94Q12767 1356 aa17.05■□□□□ 0.32
BRD9-203ENST00000475706 SETBP1Q9Y6X0 1596 aa17.05■□□□□ 0.32
BRD9-203ENST00000475706 NKTRP30414 1462 aaKnown RBP17.04■□□□□ 0.32
BRD9-203ENST00000475706 AMOTL2Q9Y2J4 779 aa17.03■□□□□ 0.32
BRD9-203ENST00000475706 PIK3R4Q99570 1358 aa17.02■□□□□ 0.32
BRD9-203ENST00000475706 IFT172Q9UG01 1749 aa17.02■□□□□ 0.32
BRD9-203ENST00000475706 C14orf37Q86TY3 774 aa17.01■□□□□ 0.31
BRD9-203ENST00000475706 SPATA31E1Q6ZUB1 1445 aa17.01■□□□□ 0.31
BRD9-203ENST00000475706 PTPRUQ92729 1446 aa17■□□□□ 0.31
BRD9-203ENST00000475706 ANKRD30BQ9BXX2 1392 aa17■□□□□ 0.31
BRD9-203ENST00000475706 METP08581 1390 aa16.99■□□□□ 0.31
BRD9-203ENST00000475706 ALKQ9UM73 1620 aa16.99■□□□□ 0.31
BRD9-203ENST00000475706 ADGRF5Q8IZF2 1346 aa16.98■□□□□ 0.31
BRD9-203ENST00000475706 SETD1AO15047 1707 aaKnown RBP16.98■□□□□ 0.31
BRD9-203ENST00000475706 XRN1Q8IZH2 1706 aaKnown RBP16.97■□□□□ 0.31
BRD9-203ENST00000475706 MSH6P52701 1360 aa16.97■□□□□ 0.31
BRD9-203ENST00000475706 TRIM26Q12899 539 aaPredicted RBP16.95■□□□□ 0.3
BRD9-203ENST00000475706 HSPA1LP34931 641 aa16.94■□□□□ 0.3
BRD9-203ENST00000475706 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.93■□□□□ 0.3
BRD9-203ENST00000475706 KDM2AQ9Y2K7 1162 aa16.92■□□□□ 0.3
BRD9-203ENST00000475706 NCOA3Q9Y6Q9 1424 aa16.91■□□□□ 0.3
BRD9-203ENST00000475706 ATF3P18847 181 aa16.9■□□□□ 0.3
BRD9-203ENST00000475706 C19orf44Q9H6X5 657 aa16.9■□□□□ 0.3
BRD9-203ENST00000475706 ROBO1Q9Y6N7 1651 aa16.89■□□□□ 0.29
BRD9-203ENST00000475706 TMEM132EQ6IEE7 984 aa16.89■□□□□ 0.29
BRD9-203ENST00000475706 DCAF11Q8TEB1 546 aa16.89■□□□□ 0.29
BRD9-203ENST00000475706 STK26Q9P289 416 aa16.89■□□□□ 0.29
BRD9-203ENST00000475706 SLAIN2Q9P270 581 aa16.88■□□□□ 0.29
BRD9-203ENST00000475706 PIK3C2GO75747 1445 aa16.87■□□□□ 0.29
BRD9-203ENST00000475706 MYOM2P54296 1465 aa16.87■□□□□ 0.29
BRD9-203ENST00000475706 CADPS2Q86UW7 1296 aa16.87■□□□□ 0.29
BRD9-203ENST00000475706 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
BRD9-203ENST00000475706 CFAP70Q5T0N1 1121 aa16.86■□□□□ 0.29
BRD9-203ENST00000475706 NALCNQ8IZF0 1738 aa16.86■□□□□ 0.29
BRD9-203ENST00000475706 C14orf93Q9H972 538 aaKnown RBP16.85■□□□□ 0.29
BRD9-203ENST00000475706 ROBO2Q9HCK4 1378 aa16.85■□□□□ 0.29
BRD9-203ENST00000475706 LAMC1P11047 1609 aa16.85■□□□□ 0.29
BRD9-203ENST00000475706 PTCH1Q13635 1447 aa16.84■□□□□ 0.29
BRD9-203ENST00000475706 NRXN1Q9ULB1 1477 aa16.84■□□□□ 0.29
BRD9-203ENST00000475706 LRPPRCP42704 1394 aaKnown RBP16.83■□□□□ 0.28
BRD9-203ENST00000475706 ASXL1Q8IXJ9 1541 aa16.83■□□□□ 0.28
BRD9-203ENST00000475706 ADGRL3Q9HAR2 1447 aa16.83■□□□□ 0.28
BRD9-203ENST00000475706 KNDC1Q76NI1 1749 aa16.82■□□□□ 0.28
BRD9-203ENST00000475706 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
BRD9-203ENST00000475706 PHLPP1O60346 1717 aa16.82■□□□□ 0.28
BRD9-203ENST00000475706 YTHDC2Q9H6S0 1430 aaKnown RBP16.81■□□□□ 0.28
BRD9-203ENST00000475706 WAPLQ7Z5K2 1190 aa16.81■□□□□ 0.28
BRD9-203ENST00000475706 SIN3AQ96ST3 1273 aa16.81■□□□□ 0.28
BRD9-203ENST00000475706 NEUROD1Q13562 356 aa16.8■□□□□ 0.28
BRD9-203ENST00000475706 STAC3Q96MF2 364 aa16.8■□□□□ 0.28
BRD9-203ENST00000475706 DCCP43146 1447 aa16.79■□□□□ 0.28
BRD9-203ENST00000475706 ABCC11Q96J66 1382 aa16.79■□□□□ 0.28
BRD9-203ENST00000475706 PRAG1Q86YV5 1406 aa16.79■□□□□ 0.28
BRD9-203ENST00000475706 DISP3Q9P2K9 1392 aa16.78■□□□□ 0.28
BRD9-203ENST00000475706 TECPR2O15040 1411 aa16.77■□□□□ 0.27
BRD9-203ENST00000475706 MST1RQ04912 1400 aa16.77■□□□□ 0.27
BRD9-203ENST00000475706 PLEKHH1Q9ULM0 1364 aa16.77■□□□□ 0.27
BRD9-203ENST00000475706 SAFB2Q14151 953 aaKnown RBP eCLIP16.75■□□□□ 0.27
BRD9-203ENST00000475706 BRINP3Q76B58 766 aa16.75■□□□□ 0.27
BRD9-203ENST00000475706 POGKQ9P215 609 aa16.74■□□□□ 0.27
BRD9-203ENST00000475706 TRAK1Q9UPV9 953 aa16.74■□□□□ 0.27
BRD9-203ENST00000475706 L3MBTL2Q969R5 705 aa16.73■□□□□ 0.27
BRD9-203ENST00000475706 SIRT1Q96EB6 747 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms