RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 KDM5AP29375 1690 aaKnown RBP19.65■□□□□ 0.74
NIPAL3-206ENST00000475663 UBAP1LF5GYI3 381 aa19.65■□□□□ 0.74
NIPAL3-206ENST00000475663 ZNF326Q5BKZ1 582 aaKnown RBP19.64■□□□□ 0.73
NIPAL3-206ENST00000475663 SPHKAPQ2M3C7 1700 aa19.64■□□□□ 0.73
NIPAL3-206ENST00000475663 MPHOSPH9Q99550 1183 aa19.63■□□□□ 0.73
NIPAL3-206ENST00000475663 RAB3GAP2Q9H2M9 1393 aa19.62■□□□□ 0.73
NIPAL3-206ENST00000475663 STRCP1A6NGW2 1772 aa19.62■□□□□ 0.73
NIPAL3-206ENST00000475663 CLTCL1P53675 1640 aa19.62■□□□□ 0.73
NIPAL3-206ENST00000475663 CPS1P31327 1500 aa19.61■□□□□ 0.73
NIPAL3-206ENST00000475663 RBM33Q96EV2 1170 aaKnown RBP19.61■□□□□ 0.73
NIPAL3-206ENST00000475663 PLEKHG1Q9ULL1 1385 aa19.6■□□□□ 0.73
NIPAL3-206ENST00000475663 HDGFP51858 240 aaKnown RBP19.6■□□□□ 0.73
NIPAL3-206ENST00000475663 TRPM2O94759 1503 aa19.6■□□□□ 0.73
NIPAL3-206ENST00000475663 IQSEC2Q5JU85 1478 aa19.6■□□□□ 0.73
NIPAL3-206ENST00000475663 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.59■□□□□ 0.73
NIPAL3-206ENST00000475663 LRRC7Q96NW7 1537 aa19.58■□□□□ 0.73
NIPAL3-206ENST00000475663 SCAF1Q9H7N4 1312 aaKnown RBP19.57■□□□□ 0.72
NIPAL3-206ENST00000475663 PIP4K2BP78356 416 aa19.57■□□□□ 0.72
NIPAL3-206ENST00000475663 KCNA6P17658 529 aa19.55■□□□□ 0.72
NIPAL3-206ENST00000475663 ADAMTS13Q76LX8 1427 aa19.54■□□□□ 0.72
NIPAL3-206ENST00000475663 PROSER2Q86WR7 435 aaPredicted RBP19.53■□□□□ 0.72
NIPAL3-206ENST00000475663 RGL3Q3MIN7 710 aa19.51■□□□□ 0.71
NIPAL3-206ENST00000475663 TBX22Q9Y458 520 aa19.51■□□□□ 0.71
NIPAL3-206ENST00000475663 TMEM94Q12767 1356 aa19.51■□□□□ 0.71
NIPAL3-206ENST00000475663 TOM1O60784 492 aa19.5■□□□□ 0.71
NIPAL3-206ENST00000475663 NEXMIFQ5QGS0 1516 aa19.49■□□□□ 0.71
NIPAL3-206ENST00000475663 CCDC144AA2RUR9 1427 aa19.49■□□□□ 0.71
NIPAL3-206ENST00000475663 ALKQ9UM73 1620 aa19.47■□□□□ 0.71
NIPAL3-206ENST00000475663 PTPRUQ92729 1446 aa19.46■□□□□ 0.71
NIPAL3-206ENST00000475663 KIF1BO60333 1816 aa19.45■□□□□ 0.7
NIPAL3-206ENST00000475663 METP08581 1390 aa19.44■□□□□ 0.7
NIPAL3-206ENST00000475663 NWD1Q149M9 1564 aa19.44■□□□□ 0.7
NIPAL3-206ENST00000475663 AMOTL2Q9Y2J4 779 aa19.44■□□□□ 0.7
NIPAL3-206ENST00000475663 NRXN3Q9Y4C0 1643 aa19.43■□□□□ 0.7
NIPAL3-206ENST00000475663 HSPA1LP34931 641 aa19.43■□□□□ 0.7
NIPAL3-206ENST00000475663 VGFO15240 615 aaPredicted RBP19.42■□□□□ 0.7
NIPAL3-206ENST00000475663 ADGRF5Q8IZF2 1346 aa19.42■□□□□ 0.7
NIPAL3-206ENST00000475663 SPATA31E1Q6ZUB1 1445 aa19.42■□□□□ 0.7
NIPAL3-206ENST00000475663 XIRP1Q702N8 1843 aaKnown RBP19.41■□□□□ 0.7
NIPAL3-206ENST00000475663 NKTRP30414 1462 aaKnown RBP19.41■□□□□ 0.7
NIPAL3-206ENST00000475663 SETBP1Q9Y6X0 1596 aa19.41■□□□□ 0.7
NIPAL3-206ENST00000475663 RPGRIP1LQ68CZ1 1315 aa19.41■□□□□ 0.7
NIPAL3-206ENST00000475663 ACIN1Q9UKV3 1341 aaKnown RBP19.41■□□□□ 0.7
NIPAL3-206ENST00000475663 DIP2AQ14689 1571 aa19.4■□□□□ 0.7
NIPAL3-206ENST00000475663 C14orf37Q86TY3 774 aa19.4■□□□□ 0.7
NIPAL3-206ENST00000475663 CHD2O14647 1828 aaKnown RBP19.39■□□□□ 0.7
NIPAL3-206ENST00000475663 HRCP23327 699 aa19.38■□□□□ 0.69
NIPAL3-206ENST00000475663 PIK3R4Q99570 1358 aa19.38■□□□□ 0.69
NIPAL3-206ENST00000475663 ANKRD30BQ9BXX2 1392 aa19.37■□□□□ 0.69
NIPAL3-206ENST00000475663 MSH6P52701 1360 aa19.35■□□□□ 0.69
NIPAL3-206ENST00000475663 PPLO60437 1756 aa19.34■□□□□ 0.69
NIPAL3-206ENST00000475663 TMEM132EQ6IEE7 984 aa19.31■□□□□ 0.68
NIPAL3-206ENST00000475663 XRN1Q8IZH2 1706 aaKnown RBP19.31■□□□□ 0.68
NIPAL3-206ENST00000475663 SLAIN2Q9P270 581 aa19.3■□□□□ 0.68
NIPAL3-206ENST00000475663 STK26Q9P289 416 aa19.3■□□□□ 0.68
NIPAL3-206ENST00000475663 KDM2AQ9Y2K7 1162 aa19.29■□□□□ 0.68
NIPAL3-206ENST00000475663 C19orf44Q9H6X5 657 aa19.28■□□□□ 0.68
NIPAL3-206ENST00000475663 ROBO2Q9HCK4 1378 aa19.28■□□□□ 0.68
NIPAL3-206ENST00000475663 ATF3P18847 181 aa19.27■□□□□ 0.68
NIPAL3-206ENST00000475663 SETD1AO15047 1707 aaKnown RBP19.27■□□□□ 0.68
NIPAL3-206ENST00000475663 CFAP70Q5T0N1 1121 aa19.26■□□□□ 0.67
NIPAL3-206ENST00000475663 PIK3C2GO75747 1445 aa19.25■□□□□ 0.67
NIPAL3-206ENST00000475663 FAM135BQ49AJ0 1406 aa19.25■□□□□ 0.67
NIPAL3-206ENST00000475663 NCOA3Q9Y6Q9 1424 aa19.25■□□□□ 0.67
NIPAL3-206ENST00000475663 IFT172Q9UG01 1749 aa19.25■□□□□ 0.67
NIPAL3-206ENST00000475663 DCAF11Q8TEB1 546 aa19.25■□□□□ 0.67
NIPAL3-206ENST00000475663 DISP3Q9P2K9 1392 aa19.24■□□□□ 0.67
NIPAL3-206ENST00000475663 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.23■□□□□ 0.67
NIPAL3-206ENST00000475663 CADPS2Q86UW7 1296 aa19.23■□□□□ 0.67
NIPAL3-206ENST00000475663 ASXL1Q8IXJ9 1541 aa19.23■□□□□ 0.67
NIPAL3-206ENST00000475663 ROBO1Q9Y6N7 1651 aa19.23■□□□□ 0.67
NIPAL3-206ENST00000475663 TRIM26Q12899 539 aaPredicted RBP19.22■□□□□ 0.67
NIPAL3-206ENST00000475663 WAPLQ7Z5K2 1190 aa19.22■□□□□ 0.67
NIPAL3-206ENST00000475663 DHX57Q6P158 1386 aaKnown RBP19.21■□□□□ 0.67
NIPAL3-206ENST00000475663 C14orf93Q9H972 538 aaKnown RBP19.21■□□□□ 0.67
NIPAL3-206ENST00000475663 PTCH1Q13635 1447 aa19.2■□□□□ 0.66
NIPAL3-206ENST00000475663 ADGRL3Q9HAR2 1447 aa19.2■□□□□ 0.66
NIPAL3-206ENST00000475663 MYOM2P54296 1465 aa19.2■□□□□ 0.66
NIPAL3-206ENST00000475663 PLEKHH1Q9ULM0 1364 aa19.19■□□□□ 0.66
NIPAL3-206ENST00000475663 SIN3AQ96ST3 1273 aa19.19■□□□□ 0.66
NIPAL3-206ENST00000475663 NRXN1Q9ULB1 1477 aa19.19■□□□□ 0.66
NIPAL3-206ENST00000475663 LRPPRCP42704 1394 aaKnown RBP19.19■□□□□ 0.66
NIPAL3-206ENST00000475663 BRINP3Q76B58 766 aa19.17■□□□□ 0.66
NIPAL3-206ENST00000475663 NALCNQ8IZF0 1738 aa19.17■□□□□ 0.66
NIPAL3-206ENST00000475663 MST1RQ04912 1400 aa19.17■□□□□ 0.66
NIPAL3-206ENST00000475663 YTHDC2Q9H6S0 1430 aaKnown RBP19.17■□□□□ 0.66
NIPAL3-206ENST00000475663 DDX17Q92841 729 aaKnown RBP19.16■□□□□ 0.66
NIPAL3-206ENST00000475663 NEUROD1Q13562 356 aa19.15■□□□□ 0.66
NIPAL3-206ENST00000475663 SAFB2Q14151 953 aaKnown RBP eCLIP19.15■□□□□ 0.66
NIPAL3-206ENST00000475663 DCCP43146 1447 aa19.15■□□□□ 0.66
NIPAL3-206ENST00000475663 NUTM2FA1L443 756 aa19.14■□□□□ 0.65
NIPAL3-206ENST00000475663 ABCC11Q96J66 1382 aa19.14■□□□□ 0.65
NIPAL3-206ENST00000475663 PRAG1Q86YV5 1406 aa19.14■□□□□ 0.65
NIPAL3-206ENST00000475663 ILDR2Q71H61 639 aa19.12■□□□□ 0.65
NIPAL3-206ENST00000475663 ORAI2Q96SN7 254 aa19.12■□□□□ 0.65
NIPAL3-206ENST00000475663 MED1Q15648 1581 aaPredicted RBP19.11■□□□□ 0.65
NIPAL3-206ENST00000475663 TECPR2O15040 1411 aa19.11■□□□□ 0.65
NIPAL3-206ENST00000475663 TRAK1Q9UPV9 953 aa19.11■□□□□ 0.65
NIPAL3-206ENST00000475663 C1orf167Q5SNV9 1468 aa19.1■□□□□ 0.65
NIPAL3-206ENST00000475663 PRAM1Q96QH2 718 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms