RNA–Protein interactions for RNA: ENST00000474838.1

ITGB5-205, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 475 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-205ENST00000474838 PLEKHG1Q9ULL1 1385 aa24.54■■□□□ 1.52
ITGB5-205ENST00000474838 NWD1Q149M9 1564 aa24.54■■□□□ 1.52
ITGB5-205ENST00000474838 SLC26A8Q96RN1 970 aa24.53■■□□□ 1.52
ITGB5-205ENST00000474838 XIRP1Q702N8 1843 aaKnown RBP24.52■■□□□ 1.52
ITGB5-205ENST00000474838 HDGFP51858 240 aaKnown RBP24.52■■□□□ 1.52
ITGB5-205ENST00000474838 SPHKAPQ2M3C7 1700 aa24.52■■□□□ 1.52
ITGB5-205ENST00000474838 NKTRP30414 1462 aaKnown RBP24.51■■□□□ 1.51
ITGB5-205ENST00000474838 PPP1R15AO75807 674 aaPredicted RBP24.51■■□□□ 1.51
ITGB5-205ENST00000474838 KCNA6P17658 529 aa24.51■■□□□ 1.51
ITGB5-205ENST00000474838 HFM1A2PYH4 1435 aa24.51■■□□□ 1.51
ITGB5-205ENST00000474838 CHGAP10645 457 aaKnown RBP24.5■■□□□ 1.51
ITGB5-205ENST00000474838 HSPA1LP34931 641 aa24.5■■□□□ 1.51
ITGB5-205ENST00000474838 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.49■■□□□ 1.51
ITGB5-205ENST00000474838 BCANQ96GW7 911 aa24.49■■□□□ 1.51
ITGB5-205ENST00000474838 TMEM94Q12767 1356 aa24.47■■□□□ 1.51
ITGB5-205ENST00000474838 DIP2AQ14689 1571 aa24.45■■□□□ 1.5
ITGB5-205ENST00000474838 TRPM2O94759 1503 aa24.43■■□□□ 1.5
ITGB5-205ENST00000474838 ADAMTS13Q76LX8 1427 aa24.42■■□□□ 1.5
ITGB5-205ENST00000474838 PROSER2Q86WR7 435 aaPredicted RBP24.41■■□□□ 1.5
ITGB5-205ENST00000474838 SENP3Q9H4L4 574 aaPredicted RBP24.41■■□□□ 1.5
ITGB5-205ENST00000474838 CHD2O14647 1828 aaKnown RBP24.4■■□□□ 1.5
ITGB5-205ENST00000474838 TBX22Q9Y458 520 aa24.4■■□□□ 1.5
ITGB5-205ENST00000474838 CLTCL1P53675 1640 aa24.39■■□□□ 1.5
ITGB5-205ENST00000474838 NUTM2DQ5VT03 806 aaPredicted RBP24.38■■□□□ 1.49
ITGB5-205ENST00000474838 PIK3R4Q99570 1358 aa24.37■■□□□ 1.49
ITGB5-205ENST00000474838 MED1Q15648 1581 aaPredicted RBP24.37■■□□□ 1.49
ITGB5-205ENST00000474838 SETBP1Q9Y6X0 1596 aa24.34■■□□□ 1.49
ITGB5-205ENST00000474838 MSH6P52701 1360 aa24.34■■□□□ 1.49
ITGB5-205ENST00000474838 ILDR2Q71H61 639 aa24.34■■□□□ 1.49
ITGB5-205ENST00000474838 TRIM52Q96A61 297 aa24.34■■□□□ 1.49
ITGB5-205ENST00000474838 FAM135BQ49AJ0 1406 aa24.34■■□□□ 1.49
ITGB5-205ENST00000474838 RBM33Q96EV2 1170 aaKnown RBP24.33■■□□□ 1.49
ITGB5-205ENST00000474838 NRXN3Q9Y4C0 1643 aa24.32■■□□□ 1.48
ITGB5-205ENST00000474838 NEXMIFQ5QGS0 1516 aa24.31■■□□□ 1.48
ITGB5-205ENST00000474838 ZNF326Q5BKZ1 582 aaKnown RBP24.31■■□□□ 1.48
ITGB5-205ENST00000474838 NCOA3Q9Y6Q9 1424 aa24.31■■□□□ 1.48
ITGB5-205ENST00000474838 KIF1BO60333 1816 aa24.3■■□□□ 1.48
ITGB5-205ENST00000474838 SLC4A1APQ9BWU0 796 aaKnown RBP24.29■■□□□ 1.48
ITGB5-205ENST00000474838 ROBO1Q9Y6N7 1651 aa24.29■■□□□ 1.48
ITGB5-205ENST00000474838 PTPRUQ92729 1446 aa24.26■■□□□ 1.47
ITGB5-205ENST00000474838 XRN1Q8IZH2 1706 aaKnown RBP24.25■■□□□ 1.47
ITGB5-205ENST00000474838 AMOTL2Q9Y2J4 779 aa24.22■■□□□ 1.47
ITGB5-205ENST00000474838 SLAIN2Q9P270 581 aa24.21■■□□□ 1.47
ITGB5-205ENST00000474838 C14orf37Q86TY3 774 aa24.2■■□□□ 1.46
ITGB5-205ENST00000474838 METP08581 1390 aa24.19■■□□□ 1.46
ITGB5-205ENST00000474838 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.18■■□□□ 1.46
ITGB5-205ENST00000474838 SOCS7O14512 581 aa24.18■■□□□ 1.46
ITGB5-205ENST00000474838 C19orf44Q9H6X5 657 aa24.17■■□□□ 1.46
ITGB5-205ENST00000474838 RPGRIP1LQ68CZ1 1315 aa24.16■■□□□ 1.46
ITGB5-205ENST00000474838 CADPS2Q86UW7 1296 aa24.16■■□□□ 1.46
ITGB5-205ENST00000474838 DCCP43146 1447 aa24.16■■□□□ 1.46
ITGB5-205ENST00000474838 VGFO15240 615 aaPredicted RBP24.15■■□□□ 1.46
ITGB5-205ENST00000474838 CCDC144AA2RUR9 1427 aa24.15■■□□□ 1.46
ITGB5-205ENST00000474838 ACIN1Q9UKV3 1341 aaKnown RBP24.14■■□□□ 1.46
ITGB5-205ENST00000474838 PPLO60437 1756 aa24.14■■□□□ 1.46
ITGB5-205ENST00000474838 FOXD1Q16676 465 aa24.14■■□□□ 1.45
ITGB5-205ENST00000474838 PHF23Q9BUL5 403 aaPredicted RBP24.14■■□□□ 1.45
ITGB5-205ENST00000474838 SETD1AO15047 1707 aaKnown RBP24.13■■□□□ 1.45
ITGB5-205ENST00000474838 PHLPP1O60346 1717 aa24.13■■□□□ 1.45
ITGB5-205ENST00000474838 ATF3P18847 181 aa24.13■■□□□ 1.45
ITGB5-205ENST00000474838 SETD5Q9C0A6 1442 aa24.12■■□□□ 1.45
ITGB5-205ENST00000474838 MPHOSPH9Q99550 1183 aa24.12■■□□□ 1.45
ITGB5-205ENST00000474838 COL16A1Q07092 1604 aaPredicted RBP24.09■■□□□ 1.45
ITGB5-205ENST00000474838 PTCH1Q13635 1447 aa24.09■■□□□ 1.45
ITGB5-205ENST00000474838 ADGRL3Q9HAR2 1447 aa24.09■■□□□ 1.45
ITGB5-205ENST00000474838 AHDC1Q5TGY3 1603 aaPredicted RBP24.08■■□□□ 1.45
ITGB5-205ENST00000474838 SPATA31E1Q6ZUB1 1445 aa24.08■■□□□ 1.44
ITGB5-205ENST00000474838 PRAG1Q86YV5 1406 aa24.08■■□□□ 1.44
ITGB5-205ENST00000474838 NALCNQ8IZF0 1738 aa24.06■■□□□ 1.44
ITGB5-205ENST00000474838 JCADQ9P266 1359 aa24.04■■□□□ 1.44
ITGB5-205ENST00000474838 MST1RQ04912 1400 aa24.04■■□□□ 1.44
ITGB5-205ENST00000474838 IFT172Q9UG01 1749 aa24.04■■□□□ 1.44
ITGB5-205ENST00000474838 RAB3GAP2Q9H2M9 1393 aa24.03■■□□□ 1.44
ITGB5-205ENST00000474838 ASXL1Q8IXJ9 1541 aa24.02■■□□□ 1.44
ITGB5-205ENST00000474838 ANKRD30BQ9BXX2 1392 aa24.02■■□□□ 1.44
ITGB5-205ENST00000474838 BRINP3Q76B58 766 aa24.01■■□□□ 1.43
ITGB5-205ENST00000474838 ROBO2Q9HCK4 1378 aa24.01■■□□□ 1.43
ITGB5-205ENST00000474838 RGL3Q3MIN7 710 aa23.98■■□□□ 1.43
ITGB5-205ENST00000474838 ADGRF5Q8IZF2 1346 aa23.98■■□□□ 1.43
ITGB5-205ENST00000474838 RGS17Q9UGC6 210 aaPredicted RBP23.96■■□□□ 1.43
ITGB5-205ENST00000474838 SHPRHQ149N8 1683 aa23.95■■□□□ 1.43
ITGB5-205ENST00000474838 NHSL1Q5SYE7 1610 aa23.95■■□□□ 1.43
ITGB5-205ENST00000474838 PIK3C2GO75747 1445 aa23.95■■□□□ 1.42
ITGB5-205ENST00000474838 SPATA31A6Q5VVP1 1343 aa23.93■■□□□ 1.42
ITGB5-205ENST00000474838 TECPR2O15040 1411 aa23.93■■□□□ 1.42
ITGB5-205ENST00000474838 C1orf167Q5SNV9 1468 aa23.92■■□□□ 1.42
ITGB5-205ENST00000474838 MYOM2P54296 1465 aa23.9■■□□□ 1.42
ITGB5-205ENST00000474838 LRP6O75581 1613 aa23.9■■□□□ 1.42
ITGB5-205ENST00000474838 CDC42BPGQ6DT37 1551 aa23.9■■□□□ 1.42
ITGB5-205ENST00000474838 NRXN1Q9ULB1 1477 aa23.89■■□□□ 1.42
ITGB5-205ENST00000474838 KNDC1Q76NI1 1749 aa23.89■■□□□ 1.41
ITGB5-205ENST00000474838 LRPPRCP42704 1394 aaKnown RBP23.89■■□□□ 1.41
ITGB5-205ENST00000474838 LAMC1P11047 1609 aa23.87■■□□□ 1.41
ITGB5-205ENST00000474838 HRCP23327 699 aa23.85■■□□□ 1.41
ITGB5-205ENST00000474838 ABCC11Q96J66 1382 aa23.85■■□□□ 1.41
ITGB5-205ENST00000474838 POTEAQ6S8J7 498 aa23.83■■□□□ 1.41
ITGB5-205ENST00000474838 YTHDC2Q9H6S0 1430 aaKnown RBP23.83■■□□□ 1.4
ITGB5-205ENST00000474838 LRRC59Q96AG4 307 aaKnown RBP23.82■■□□□ 1.4
ITGB5-205ENST00000474838 STK26Q9P289 416 aa23.82■■□□□ 1.4
ITGB5-205ENST00000474838 MEX3CQ5U5Q3 659 aaKnown RBP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms