RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 XIRP1Q702N8 1843 aaKnown RBP27.93■■■□□ 2.06
DNMT3A-210ENST00000474807 KCNA6P17658 529 aa27.93■■■□□ 2.06
DNMT3A-210ENST00000474807 HSPA1LP34931 641 aa27.93■■■□□ 2.06
DNMT3A-210ENST00000474807 NAIPQ13075 1403 aa27.92■■■□□ 2.06
DNMT3A-210ENST00000474807 PLEKHG1Q9ULL1 1385 aa27.91■■■□□ 2.06
DNMT3A-210ENST00000474807 HDGFP51858 240 aaKnown RBP27.91■■■□□ 2.06
DNMT3A-210ENST00000474807 CHGAP10645 457 aaKnown RBP27.9■■■□□ 2.06
DNMT3A-210ENST00000474807 BCANQ96GW7 911 aa27.88■■■□□ 2.05
DNMT3A-210ENST00000474807 NWD1Q149M9 1564 aa27.87■■■□□ 2.05
DNMT3A-210ENST00000474807 PPP1R15AO75807 674 aaPredicted RBP27.86■■■□□ 2.05
DNMT3A-210ENST00000474807 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.86■■■□□ 2.05
DNMT3A-210ENST00000474807 SPHKAPQ2M3C7 1700 aa27.85■■■□□ 2.05
DNMT3A-210ENST00000474807 TMEM94Q12767 1356 aa27.85■■■□□ 2.05
DNMT3A-210ENST00000474807 SENP3Q9H4L4 574 aaPredicted RBP27.84■■■□□ 2.05
DNMT3A-210ENST00000474807 HFM1A2PYH4 1435 aa27.84■■■□□ 2.05
DNMT3A-210ENST00000474807 NKTRP30414 1462 aaKnown RBP27.83■■■□□ 2.04
DNMT3A-210ENST00000474807 NUTM2DQ5VT03 806 aaPredicted RBP27.81■■■□□ 2.04
DNMT3A-210ENST00000474807 ILDR2Q71H61 639 aa27.81■■■□□ 2.04
DNMT3A-210ENST00000474807 TBX22Q9Y458 520 aa27.81■■■□□ 2.04
DNMT3A-210ENST00000474807 PROSER2Q86WR7 435 aaPredicted RBP27.8■■■□□ 2.04
DNMT3A-210ENST00000474807 CHD2O14647 1828 aaKnown RBP27.8■■■□□ 2.04
DNMT3A-210ENST00000474807 ADAMTS13Q76LX8 1427 aa27.79■■■□□ 2.04
DNMT3A-210ENST00000474807 RBM33Q96EV2 1170 aaKnown RBP27.78■■■□□ 2.04
DNMT3A-210ENST00000474807 DIP2AQ14689 1571 aa27.74■■■□□ 2.03
DNMT3A-210ENST00000474807 TRPM2O94759 1503 aa27.74■■■□□ 2.03
DNMT3A-210ENST00000474807 CLTCL1P53675 1640 aa27.73■■■□□ 2.03
DNMT3A-210ENST00000474807 FAM135BQ49AJ0 1406 aa27.71■■■□□ 2.03
DNMT3A-210ENST00000474807 TRIM52Q96A61 297 aa27.71■■■□□ 2.03
DNMT3A-210ENST00000474807 PIK3R4Q99570 1358 aa27.71■■■□□ 2.03
DNMT3A-210ENST00000474807 MED1Q15648 1581 aaPredicted RBP27.69■■■□□ 2.02
DNMT3A-210ENST00000474807 ZNF326Q5BKZ1 582 aaKnown RBP27.67■■■□□ 2.02
DNMT3A-210ENST00000474807 MSH6P52701 1360 aa27.67■■■□□ 2.02
DNMT3A-210ENST00000474807 NRXN3Q9Y4C0 1643 aa27.67■■■□□ 2.02
DNMT3A-210ENST00000474807 SETBP1Q9Y6X0 1596 aa27.65■■■□□ 2.02
DNMT3A-210ENST00000474807 SLC4A1APQ9BWU0 796 aaKnown RBP27.65■■■□□ 2.02
DNMT3A-210ENST00000474807 NCOA3Q9Y6Q9 1424 aa27.65■■■□□ 2.02
DNMT3A-210ENST00000474807 NEXMIFQ5QGS0 1516 aa27.63■■■□□ 2.01
DNMT3A-210ENST00000474807 KIF1BO60333 1816 aa27.63■■■□□ 2.01
DNMT3A-210ENST00000474807 PTPRUQ92729 1446 aa27.63■■■□□ 2.01
DNMT3A-210ENST00000474807 ROBO1Q9Y6N7 1651 aa27.62■■■□□ 2.01
DNMT3A-210ENST00000474807 AMOTL2Q9Y2J4 779 aa27.61■■■□□ 2.01
DNMT3A-210ENST00000474807 SLAIN2Q9P270 581 aa27.59■■■□□ 2.01
DNMT3A-210ENST00000474807 SOCS7O14512 581 aa27.57■■■□□ 2
DNMT3A-210ENST00000474807 XRN1Q8IZH2 1706 aaKnown RBP27.55■■■□□ 2
DNMT3A-210ENST00000474807 METP08581 1390 aa27.55■■■□□ 2
DNMT3A-210ENST00000474807 C19orf44Q9H6X5 657 aa27.54■■■□□ 2
DNMT3A-210ENST00000474807 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.53■■■□□ 2
DNMT3A-210ENST00000474807 C14orf37Q86TY3 774 aa27.53■■■□□ 2
DNMT3A-210ENST00000474807 FOXD1Q16676 465 aa27.52■■■□□ 2
DNMT3A-210ENST00000474807 RPGRIP1LQ68CZ1 1315 aa27.49■■□□□ 1.99
DNMT3A-210ENST00000474807 VGFO15240 615 aaPredicted RBP27.49■■□□□ 1.99
DNMT3A-210ENST00000474807 CADPS2Q86UW7 1296 aa27.49■■□□□ 1.99
DNMT3A-210ENST00000474807 MPHOSPH9Q99550 1183 aa27.49■■□□□ 1.99
DNMT3A-210ENST00000474807 ATF3P18847 181 aa27.47■■□□□ 1.99
DNMT3A-210ENST00000474807 PHF23Q9BUL5 403 aaPredicted RBP27.47■■□□□ 1.99
DNMT3A-210ENST00000474807 PPLO60437 1756 aa27.45■■□□□ 1.98
DNMT3A-210ENST00000474807 SETD1AO15047 1707 aaKnown RBP27.44■■□□□ 1.98
DNMT3A-210ENST00000474807 PHLPP1O60346 1717 aa27.44■■□□□ 1.98
DNMT3A-210ENST00000474807 DCCP43146 1447 aa27.43■■□□□ 1.98
DNMT3A-210ENST00000474807 SETD5Q9C0A6 1442 aa27.43■■□□□ 1.98
DNMT3A-210ENST00000474807 CCDC144AA2RUR9 1427 aa27.42■■□□□ 1.98
DNMT3A-210ENST00000474807 ACIN1Q9UKV3 1341 aaKnown RBP27.41■■□□□ 1.98
DNMT3A-210ENST00000474807 COL16A1Q07092 1604 aaPredicted RBP27.39■■□□□ 1.98
DNMT3A-210ENST00000474807 SPATA31E1Q6ZUB1 1445 aa27.39■■□□□ 1.97
DNMT3A-210ENST00000474807 RGS17Q9UGC6 210 aaPredicted RBP27.37■■□□□ 1.97
DNMT3A-210ENST00000474807 AHDC1Q5TGY3 1603 aaPredicted RBP27.37■■□□□ 1.97
DNMT3A-210ENST00000474807 ADGRL3Q9HAR2 1447 aa27.36■■□□□ 1.97
DNMT3A-210ENST00000474807 JCADQ9P266 1359 aa27.35■■□□□ 1.97
DNMT3A-210ENST00000474807 MST1RQ04912 1400 aa27.35■■□□□ 1.97
DNMT3A-210ENST00000474807 PTCH1Q13635 1447 aa27.35■■□□□ 1.97
DNMT3A-210ENST00000474807 BRINP3Q76B58 766 aa27.35■■□□□ 1.97
DNMT3A-210ENST00000474807 PRAG1Q86YV5 1406 aa27.34■■□□□ 1.97
DNMT3A-210ENST00000474807 NALCNQ8IZF0 1738 aa27.34■■□□□ 1.97
DNMT3A-210ENST00000474807 RGL3Q3MIN7 710 aa27.33■■□□□ 1.97
DNMT3A-210ENST00000474807 RAB3GAP2Q9H2M9 1393 aa27.33■■□□□ 1.97
DNMT3A-210ENST00000474807 ROBO2Q9HCK4 1378 aa27.33■■□□□ 1.97
DNMT3A-210ENST00000474807 ADGRF5Q8IZF2 1346 aa27.32■■□□□ 1.96
DNMT3A-210ENST00000474807 IFT172Q9UG01 1749 aa27.32■■□□□ 1.96
DNMT3A-210ENST00000474807 ANKRD30BQ9BXX2 1392 aa27.3■■□□□ 1.96
DNMT3A-210ENST00000474807 ASXL1Q8IXJ9 1541 aa27.29■■□□□ 1.96
DNMT3A-210ENST00000474807 NHSL1Q5SYE7 1610 aa27.24■■□□□ 1.95
DNMT3A-210ENST00000474807 SPATA31A6Q5VVP1 1343 aa27.23■■□□□ 1.95
DNMT3A-210ENST00000474807 SHPRHQ149N8 1683 aa27.23■■□□□ 1.95
DNMT3A-210ENST00000474807 PIK3C2GO75747 1445 aa27.23■■□□□ 1.95
DNMT3A-210ENST00000474807 C1orf167Q5SNV9 1468 aa27.21■■□□□ 1.95
DNMT3A-210ENST00000474807 LRP6O75581 1613 aa27.2■■□□□ 1.95
DNMT3A-210ENST00000474807 POTEAQ6S8J7 498 aa27.19■■□□□ 1.94
DNMT3A-210ENST00000474807 TECPR2O15040 1411 aa27.18■■□□□ 1.94
DNMT3A-210ENST00000474807 LRPPRCP42704 1394 aaKnown RBP27.17■■□□□ 1.94
DNMT3A-210ENST00000474807 HRCP23327 699 aa27.16■■□□□ 1.94
DNMT3A-210ENST00000474807 DDX17Q92841 729 aaKnown RBP27.16■■□□□ 1.94
DNMT3A-210ENST00000474807 NRXN1Q9ULB1 1477 aa27.15■■□□□ 1.94
DNMT3A-210ENST00000474807 ABCC11Q96J66 1382 aa27.15■■□□□ 1.94
DNMT3A-210ENST00000474807 TMEM132EQ6IEE7 984 aa27.15■■□□□ 1.94
DNMT3A-210ENST00000474807 STK26Q9P289 416 aa27.14■■□□□ 1.94
DNMT3A-210ENST00000474807 MYOM2P54296 1465 aa27.13■■□□□ 1.93
DNMT3A-210ENST00000474807 KNDC1Q76NI1 1749 aa27.13■■□□□ 1.93
DNMT3A-210ENST00000474807 LAMC1P11047 1609 aa27.13■■□□□ 1.93
DNMT3A-210ENST00000474807 LRRC59Q96AG4 307 aaKnown RBP27.13■■□□□ 1.93
DNMT3A-210ENST00000474807 ORAI2Q96SN7 254 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms