RNA–Protein interactions for RNA: ENST00000474326.1

PFDN4-203, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 191 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-203ENST00000474326 RIMS2Q9UQ26 1411 aa24.93■■□□□ 1.58
PFDN4-203ENST00000474326 TRPM2O94759 1503 aa24.9■■□□□ 1.58
PFDN4-203ENST00000474326 ZFYVE9O95405 1425 aa24.88■■□□□ 1.57
PFDN4-203ENST00000474326 UBAP1LF5GYI3 381 aa24.88■■□□□ 1.57
PFDN4-203ENST00000474326 ZNF326Q5BKZ1 582 aaKnown RBP24.87■■□□□ 1.57
PFDN4-203ENST00000474326 SETD5Q9C0A6 1442 aa24.86■■□□□ 1.57
PFDN4-203ENST00000474326 PLEKHG1Q9ULL1 1385 aa24.86■■□□□ 1.57
PFDN4-203ENST00000474326 SLC26A8Q96RN1 970 aa24.85■■□□□ 1.57
PFDN4-203ENST00000474326 TOM1O60784 492 aa24.83■■□□□ 1.57
PFDN4-203ENST00000474326 CLTCL1P53675 1640 aa24.83■■□□□ 1.56
PFDN4-203ENST00000474326 KIF1BO60333 1816 aa24.82■■□□□ 1.56
PFDN4-203ENST00000474326 SENP3Q9H4L4 574 aaPredicted RBP24.81■■□□□ 1.56
PFDN4-203ENST00000474326 STRCP1A6NGW2 1772 aa24.8■■□□□ 1.56
PFDN4-203ENST00000474326 NUTM2DQ5VT03 806 aaPredicted RBP24.8■■□□□ 1.56
PFDN4-203ENST00000474326 LRRC7Q96NW7 1537 aa24.8■■□□□ 1.56
PFDN4-203ENST00000474326 SCAF1Q9H7N4 1312 aaKnown RBP24.79■■□□□ 1.56
PFDN4-203ENST00000474326 KCNA6P17658 529 aa24.78■■□□□ 1.56
PFDN4-203ENST00000474326 MPHOSPH9Q99550 1183 aa24.78■■□□□ 1.56
PFDN4-203ENST00000474326 DIP2AQ14689 1571 aa24.76■■□□□ 1.55
PFDN4-203ENST00000474326 RAB3GAP2Q9H2M9 1393 aa24.75■■□□□ 1.55
PFDN4-203ENST00000474326 TBX22Q9Y458 520 aa24.74■■□□□ 1.55
PFDN4-203ENST00000474326 CCDC144AA2RUR9 1427 aa24.74■■□□□ 1.55
PFDN4-203ENST00000474326 NKTRP30414 1462 aaKnown RBP24.73■■□□□ 1.55
PFDN4-203ENST00000474326 PIP4K2BP78356 416 aa24.73■■□□□ 1.55
PFDN4-203ENST00000474326 FOXD1Q16676 465 aa24.72■■□□□ 1.55
PFDN4-203ENST00000474326 PROSER2Q86WR7 435 aaPredicted RBP24.72■■□□□ 1.55
PFDN4-203ENST00000474326 NWD1Q149M9 1564 aa24.71■■□□□ 1.55
PFDN4-203ENST00000474326 PIK3R4Q99570 1358 aa24.68■■□□□ 1.54
PFDN4-203ENST00000474326 RPGRIP1LQ68CZ1 1315 aa24.68■■□□□ 1.54
PFDN4-203ENST00000474326 NEXMIFQ5QGS0 1516 aa24.68■■□□□ 1.54
PFDN4-203ENST00000474326 VGFO15240 615 aaPredicted RBP24.68■■□□□ 1.54
PFDN4-203ENST00000474326 ADAMTS13Q76LX8 1427 aa24.68■■□□□ 1.54
PFDN4-203ENST00000474326 TMEM94Q12767 1356 aa24.67■■□□□ 1.54
PFDN4-203ENST00000474326 CHD2O14647 1828 aaKnown RBP24.67■■□□□ 1.54
PFDN4-203ENST00000474326 SETBP1Q9Y6X0 1596 aa24.66■■□□□ 1.54
PFDN4-203ENST00000474326 HRCP23327 699 aa24.62■■□□□ 1.53
PFDN4-203ENST00000474326 C14orf37Q86TY3 774 aa24.62■■□□□ 1.53
PFDN4-203ENST00000474326 XIRP1Q702N8 1843 aaKnown RBP24.62■■□□□ 1.53
PFDN4-203ENST00000474326 MSH6P52701 1360 aa24.62■■□□□ 1.53
PFDN4-203ENST00000474326 NRXN3Q9Y4C0 1643 aa24.59■■□□□ 1.53
PFDN4-203ENST00000474326 PPLO60437 1756 aa24.58■■□□□ 1.53
PFDN4-203ENST00000474326 RGL3Q3MIN7 710 aa24.58■■□□□ 1.53
PFDN4-203ENST00000474326 RBM33Q96EV2 1170 aaKnown RBP24.58■■□□□ 1.53
PFDN4-203ENST00000474326 AMOTL2Q9Y2J4 779 aa24.58■■□□□ 1.53
PFDN4-203ENST00000474326 NCOA3Q9Y6Q9 1424 aa24.56■■□□□ 1.52
PFDN4-203ENST00000474326 ANKRD30BQ9BXX2 1392 aa24.54■■□□□ 1.52
PFDN4-203ENST00000474326 ALKQ9UM73 1620 aa24.53■■□□□ 1.52
PFDN4-203ENST00000474326 SPATA31E1Q6ZUB1 1445 aa24.52■■□□□ 1.52
PFDN4-203ENST00000474326 HSPA1LP34931 641 aa24.52■■□□□ 1.52
PFDN4-203ENST00000474326 METP08581 1390 aa24.51■■□□□ 1.51
PFDN4-203ENST00000474326 XRN1Q8IZH2 1706 aaKnown RBP24.5■■□□□ 1.51
PFDN4-203ENST00000474326 PTPRUQ92729 1446 aa24.5■■□□□ 1.51
PFDN4-203ENST00000474326 ATF3P18847 181 aa24.49■■□□□ 1.51
PFDN4-203ENST00000474326 C19orf44Q9H6X5 657 aa24.48■■□□□ 1.51
PFDN4-203ENST00000474326 IFT172Q9UG01 1749 aa24.47■■□□□ 1.51
PFDN4-203ENST00000474326 CADPS2Q86UW7 1296 aa24.47■■□□□ 1.51
PFDN4-203ENST00000474326 FAM135BQ49AJ0 1406 aa24.45■■□□□ 1.51
PFDN4-203ENST00000474326 SLAIN2Q9P270 581 aa24.45■■□□□ 1.5
PFDN4-203ENST00000474326 ADGRF5Q8IZF2 1346 aa24.43■■□□□ 1.5
PFDN4-203ENST00000474326 ROBO1Q9Y6N7 1651 aa24.43■■□□□ 1.5
PFDN4-203ENST00000474326 SETD1AO15047 1707 aaKnown RBP24.42■■□□□ 1.5
PFDN4-203ENST00000474326 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.42■■□□□ 1.5
PFDN4-203ENST00000474326 DISP3Q9P2K9 1392 aa24.42■■□□□ 1.5
PFDN4-203ENST00000474326 DCCP43146 1447 aa24.4■■□□□ 1.5
PFDN4-203ENST00000474326 PTCH1Q13635 1447 aa24.4■■□□□ 1.5
PFDN4-203ENST00000474326 MYOM2P54296 1465 aa24.38■■□□□ 1.49
PFDN4-203ENST00000474326 PIK3C2GO75747 1445 aa24.38■■□□□ 1.49
PFDN4-203ENST00000474326 ADGRL3Q9HAR2 1447 aa24.36■■□□□ 1.49
PFDN4-203ENST00000474326 LAMC1P11047 1609 aa24.36■■□□□ 1.49
PFDN4-203ENST00000474326 PRAG1Q86YV5 1406 aa24.34■■□□□ 1.49
PFDN4-203ENST00000474326 STAC3Q96MF2 364 aa24.33■■□□□ 1.49
PFDN4-203ENST00000474326 ROBO2Q9HCK4 1378 aa24.32■■□□□ 1.48
PFDN4-203ENST00000474326 STK26Q9P289 416 aa24.32■■□□□ 1.48
PFDN4-203ENST00000474326 NALCNQ8IZF0 1738 aa24.32■■□□□ 1.48
PFDN4-203ENST00000474326 DCAF11Q8TEB1 546 aa24.31■■□□□ 1.48
PFDN4-203ENST00000474326 PHLPP1O60346 1717 aa24.3■■□□□ 1.48
PFDN4-203ENST00000474326 NRXN1Q9ULB1 1477 aa24.3■■□□□ 1.48
PFDN4-203ENST00000474326 LRPPRCP42704 1394 aaKnown RBP24.29■■□□□ 1.48
PFDN4-203ENST00000474326 C14orf93Q9H972 538 aaKnown RBP24.29■■□□□ 1.48
PFDN4-203ENST00000474326 KDM2AQ9Y2K7 1162 aa24.29■■□□□ 1.48
PFDN4-203ENST00000474326 DHX57Q6P158 1386 aaKnown RBP24.29■■□□□ 1.48
PFDN4-203ENST00000474326 TRIM26Q12899 539 aaPredicted RBP24.28■■□□□ 1.48
PFDN4-203ENST00000474326 TMEM132EQ6IEE7 984 aa24.28■■□□□ 1.48
PFDN4-203ENST00000474326 MED1Q15648 1581 aaPredicted RBP24.27■■□□□ 1.48
PFDN4-203ENST00000474326 KNDC1Q76NI1 1749 aa24.27■■□□□ 1.48
PFDN4-203ENST00000474326 YTHDC2Q9H6S0 1430 aaKnown RBP24.27■■□□□ 1.48
PFDN4-203ENST00000474326 ABCC11Q96J66 1382 aa24.26■■□□□ 1.47
PFDN4-203ENST00000474326 TECPR2O15040 1411 aa24.26■■□□□ 1.47
PFDN4-203ENST00000474326 MST1RQ04912 1400 aa24.26■■□□□ 1.47
PFDN4-203ENST00000474326 CFAP70Q5T0N1 1121 aa24.25■■□□□ 1.47
PFDN4-203ENST00000474326 PHF23Q9BUL5 403 aaPredicted RBP24.25■■□□□ 1.47
PFDN4-203ENST00000474326 ASXL1Q8IXJ9 1541 aa24.24■■□□□ 1.47
PFDN4-203ENST00000474326 BRINP3Q76B58 766 aa24.23■■□□□ 1.47
PFDN4-203ENST00000474326 AHDC1Q5TGY3 1603 aaPredicted RBP24.21■■□□□ 1.47
PFDN4-203ENST00000474326 CDC42BPGQ6DT37 1551 aa24.2■■□□□ 1.46
PFDN4-203ENST00000474326 JCADQ9P266 1359 aa24.19■■□□□ 1.46
PFDN4-203ENST00000474326 WAPLQ7Z5K2 1190 aa24.18■■□□□ 1.46
PFDN4-203ENST00000474326 SIRT1Q96EB6 747 aa24.18■■□□□ 1.46
PFDN4-203ENST00000474326 COL16A1Q07092 1604 aaPredicted RBP24.17■■□□□ 1.46
PFDN4-203ENST00000474326 C1orf167Q5SNV9 1468 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms