RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 TMEM131LA2VDJ0 1609 aa20.22■□□□□ 0.83
USF1-205ENST00000473969 NEURL4Q96JN8 1562 aa20.21■□□□□ 0.83
USF1-205ENST00000473969 CCDC144AA2RUR9 1427 aa20.21■□□□□ 0.83
USF1-205ENST00000473969 ZNF335Q9H4Z2 1342 aaPredicted RBP20.2■□□□□ 0.82
USF1-205ENST00000473969 NUTM2DQ5VT03 806 aaPredicted RBP20.19■□□□□ 0.82
USF1-205ENST00000473969 CLTCL1P53675 1640 aa20.18■□□□□ 0.82
USF1-205ENST00000473969 CERKQ8TCT0 537 aa20.18■□□□□ 0.82
USF1-205ENST00000473969 IQGAP1P46940 1657 aa20.18■□□□□ 0.82
USF1-205ENST00000473969 ZFYVE9O95405 1425 aa20.17■□□□□ 0.82
USF1-205ENST00000473969 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
USF1-205ENST00000473969 SLC26A8Q96RN1 970 aa20.15■□□□□ 0.82
USF1-205ENST00000473969 PLEKHG1Q9ULL1 1385 aa20.15■□□□□ 0.82
USF1-205ENST00000473969 MYO5BQ9ULV0 1848 aa20.14■□□□□ 0.81
USF1-205ENST00000473969 KIF1BO60333 1816 aa20.13■□□□□ 0.81
USF1-205ENST00000473969 RPGRIP1LQ68CZ1 1315 aa20.13■□□□□ 0.81
USF1-205ENST00000473969 RGL3Q3MIN7 710 aa20.13■□□□□ 0.81
USF1-205ENST00000473969 VGFO15240 615 aaPredicted RBP20.12■□□□□ 0.81
USF1-205ENST00000473969 TBX22Q9Y458 520 aa20.08■□□□□ 0.81
USF1-205ENST00000473969 LTBP4Q8N2S1 1624 aa20.08■□□□□ 0.8
USF1-205ENST00000473969 ANKRD30BQ9BXX2 1392 aa20.08■□□□□ 0.8
USF1-205ENST00000473969 CPS1P31327 1500 aa20.07■□□□□ 0.8
USF1-205ENST00000473969 KCNA6P17658 529 aa20.06■□□□□ 0.8
USF1-205ENST00000473969 NEXMIFQ5QGS0 1516 aa20.04■□□□□ 0.8
USF1-205ENST00000473969 SPATA31E1Q6ZUB1 1445 aa20.02■□□□□ 0.8
USF1-205ENST00000473969 IQSEC2Q5JU85 1478 aa20.02■□□□□ 0.8
USF1-205ENST00000473969 DIP2AQ14689 1571 aa20■□□□□ 0.79
USF1-205ENST00000473969 PIK3R4Q99570 1358 aa20■□□□□ 0.79
USF1-205ENST00000473969 PROSER2Q86WR7 435 aaPredicted RBP20■□□□□ 0.79
USF1-205ENST00000473969 ADAMTS13Q76LX8 1427 aa20■□□□□ 0.79
USF1-205ENST00000473969 PCGF6Q9BYE7 350 aa19.99■□□□□ 0.79
USF1-205ENST00000473969 UBAP1LF5GYI3 381 aa19.97■□□□□ 0.79
USF1-205ENST00000473969 SETBP1Q9Y6X0 1596 aa19.96■□□□□ 0.79
USF1-205ENST00000473969 AMOTL2Q9Y2J4 779 aa19.96■□□□□ 0.79
USF1-205ENST00000473969 ADGRF5Q8IZF2 1346 aa19.96■□□□□ 0.79
USF1-205ENST00000473969 TOM1O60784 492 aa19.95■□□□□ 0.78
USF1-205ENST00000473969 LRRC7Q96NW7 1537 aa19.95■□□□□ 0.78
USF1-205ENST00000473969 PPLO60437 1756 aa19.94■□□□□ 0.78
USF1-205ENST00000473969 DCAF11Q8TEB1 546 aa19.94■□□□□ 0.78
USF1-205ENST00000473969 STAC3Q96MF2 364 aa19.94■□□□□ 0.78
USF1-205ENST00000473969 KDM2AQ9Y2K7 1162 aa19.94■□□□□ 0.78
USF1-205ENST00000473969 DHX57Q6P158 1386 aaKnown RBP19.93■□□□□ 0.78
USF1-205ENST00000473969 NKTRP30414 1462 aaKnown RBP19.92■□□□□ 0.78
USF1-205ENST00000473969 C14orf37Q86TY3 774 aa19.92■□□□□ 0.78
USF1-205ENST00000473969 TMEM94Q12767 1356 aa19.92■□□□□ 0.78
USF1-205ENST00000473969 STRCP1A6NGW2 1772 aa19.91■□□□□ 0.78
USF1-205ENST00000473969 METP08581 1390 aa19.91■□□□□ 0.78
USF1-205ENST00000473969 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
USF1-205ENST00000473969 NWD1Q149M9 1564 aa19.9■□□□□ 0.78
USF1-205ENST00000473969 NRXN3Q9Y4C0 1643 aa19.9■□□□□ 0.78
USF1-205ENST00000473969 RBM33Q96EV2 1170 aaKnown RBP19.89■□□□□ 0.77
USF1-205ENST00000473969 SCAF1Q9H7N4 1312 aaKnown RBP19.89■□□□□ 0.77
USF1-205ENST00000473969 CHD2O14647 1828 aaKnown RBP19.88■□□□□ 0.77
USF1-205ENST00000473969 ALKQ9UM73 1620 aa19.88■□□□□ 0.77
USF1-205ENST00000473969 ILDR2Q71H61 639 aa19.88■□□□□ 0.77
USF1-205ENST00000473969 MYOM2P54296 1465 aa19.87■□□□□ 0.77
USF1-205ENST00000473969 PTPRUQ92729 1446 aa19.87■□□□□ 0.77
USF1-205ENST00000473969 SIN3AQ96ST3 1273 aa19.87■□□□□ 0.77
USF1-205ENST00000473969 MSH6P52701 1360 aa19.86■□□□□ 0.77
USF1-205ENST00000473969 PIP4K2BP78356 416 aa19.86■□□□□ 0.77
USF1-205ENST00000473969 PIK3C2GO75747 1445 aa19.85■□□□□ 0.77
USF1-205ENST00000473969 IFT172Q9UG01 1749 aa19.85■□□□□ 0.77
USF1-205ENST00000473969 C14orf93Q9H972 538 aaKnown RBP19.85■□□□□ 0.77
USF1-205ENST00000473969 NCOA3Q9Y6Q9 1424 aa19.85■□□□□ 0.77
USF1-205ENST00000473969 CFAP70Q5T0N1 1121 aa19.84■□□□□ 0.77
USF1-205ENST00000473969 TMEM132EQ6IEE7 984 aa19.83■□□□□ 0.77
USF1-205ENST00000473969 STK26Q9P289 416 aa19.83■□□□□ 0.77
USF1-205ENST00000473969 DISP3Q9P2K9 1392 aa19.82■□□□□ 0.76
USF1-205ENST00000473969 NRXN1Q9ULB1 1477 aa19.81■□□□□ 0.76
USF1-205ENST00000473969 SOCS7O14512 581 aa19.81■□□□□ 0.76
USF1-205ENST00000473969 ATF3P18847 181 aa19.81■□□□□ 0.76
USF1-205ENST00000473969 C19orf44Q9H6X5 657 aa19.81■□□□□ 0.76
USF1-205ENST00000473969 CADPS2Q86UW7 1296 aa19.79■□□□□ 0.76
USF1-205ENST00000473969 L3MBTL2Q969R5 705 aa19.78■□□□□ 0.76
USF1-205ENST00000473969 XRN1Q8IZH2 1706 aaKnown RBP19.78■□□□□ 0.76
USF1-205ENST00000473969 LRPPRCP42704 1394 aaKnown RBP19.78■□□□□ 0.76
USF1-205ENST00000473969 PTCH1Q13635 1447 aa19.77■□□□□ 0.76
USF1-205ENST00000473969 SETD1AO15047 1707 aaKnown RBP19.76■□□□□ 0.75
USF1-205ENST00000473969 LAMC1P11047 1609 aa19.76■□□□□ 0.75
USF1-205ENST00000473969 YTHDC2Q9H6S0 1430 aaKnown RBP19.76■□□□□ 0.75
USF1-205ENST00000473969 TONSLQ96HA7 1378 aa19.75■□□□□ 0.75
USF1-205ENST00000473969 ABCC11Q96J66 1382 aa19.75■□□□□ 0.75
USF1-205ENST00000473969 ROBO2Q9HCK4 1378 aa19.75■□□□□ 0.75
USF1-205ENST00000473969 XIRP1Q702N8 1843 aaKnown RBP19.75■□□□□ 0.75
USF1-205ENST00000473969 SLAIN2Q9P270 581 aa19.74■□□□□ 0.75
USF1-205ENST00000473969 PRAG1Q86YV5 1406 aa19.72■□□□□ 0.75
USF1-205ENST00000473969 SIRT1Q96EB6 747 aa19.72■□□□□ 0.75
USF1-205ENST00000473969 POGKQ9P215 609 aa19.72■□□□□ 0.75
USF1-205ENST00000473969 WAPLQ7Z5K2 1190 aa19.71■□□□□ 0.75
USF1-205ENST00000473969 TRAK1Q9UPV9 953 aa19.71■□□□□ 0.75
USF1-205ENST00000473969 ADGRL3Q9HAR2 1447 aa19.7■□□□□ 0.74
USF1-205ENST00000473969 CCER1Q8TC90 406 aaPredicted RBP19.7■□□□□ 0.74
USF1-205ENST00000473969 TECPR2O15040 1411 aa19.69■□□□□ 0.74
USF1-205ENST00000473969 DCCP43146 1447 aa19.69■□□□□ 0.74
USF1-205ENST00000473969 ASXL1Q8IXJ9 1541 aa19.69■□□□□ 0.74
USF1-205ENST00000473969 CLSPNQ9HAW4 1339 aa19.69■□□□□ 0.74
USF1-205ENST00000473969 FAM135BQ49AJ0 1406 aa19.68■□□□□ 0.74
USF1-205ENST00000473969 PRAM1Q96QH2 718 aa19.67■□□□□ 0.74
USF1-205ENST00000473969 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.67■□□□□ 0.74
USF1-205ENST00000473969 HSPA1LP34931 641 aa19.66■□□□□ 0.74
USF1-205ENST00000473969 SAFB2Q14151 953 aaKnown RBP eCLIP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms