RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 RIMS2Q9UQ26 1411 aa18.2■□□□□ 0.5
DDX56-209ENST00000473924 NPHP4O75161 1426 aaPredicted RBP18.19■□□□□ 0.5
DDX56-209ENST00000473924 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.19■□□□□ 0.5
DDX56-209ENST00000473924 NEURL4Q96JN8 1562 aa18.19■□□□□ 0.5
DDX56-209ENST00000473924 BCANQ96GW7 911 aa18.18■□□□□ 0.5
DDX56-209ENST00000473924 MED14O60244 1454 aa18.18■□□□□ 0.5
DDX56-209ENST00000473924 ANKRD30BQ9BXX2 1392 aa18.17■□□□□ 0.5
DDX56-209ENST00000473924 ZFYVE9O95405 1425 aa18.16■□□□□ 0.5
DDX56-209ENST00000473924 IQGAP1P46940 1657 aa18.16■□□□□ 0.5
DDX56-209ENST00000473924 NUTM2DQ5VT03 806 aaPredicted RBP18.16■□□□□ 0.5
DDX56-209ENST00000473924 RGL3Q3MIN7 710 aa18.14■□□□□ 0.49
DDX56-209ENST00000473924 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
DDX56-209ENST00000473924 RPGRIP1LQ68CZ1 1315 aa18.12■□□□□ 0.49
DDX56-209ENST00000473924 DHX57Q6P158 1386 aaKnown RBP18.11■□□□□ 0.49
DDX56-209ENST00000473924 PLEKHG1Q9ULL1 1385 aa18.11■□□□□ 0.49
DDX56-209ENST00000473924 NEXMIFQ5QGS0 1516 aa18.1■□□□□ 0.49
DDX56-209ENST00000473924 SPATA31E1Q6ZUB1 1445 aa18.1■□□□□ 0.49
DDX56-209ENST00000473924 VGFO15240 615 aaPredicted RBP18.09■□□□□ 0.49
DDX56-209ENST00000473924 SLC26A8Q96RN1 970 aa18.09■□□□□ 0.49
DDX56-209ENST00000473924 ZNF335Q9H4Z2 1342 aaPredicted RBP18.08■□□□□ 0.49
DDX56-209ENST00000473924 PPLO60437 1756 aa18.06■□□□□ 0.48
DDX56-209ENST00000473924 TBX22Q9Y458 520 aa18.02■□□□□ 0.48
DDX56-209ENST00000473924 IFT172Q9UG01 1749 aa18.01■□□□□ 0.47
DDX56-209ENST00000473924 DIP2AQ14689 1571 aa18.01■□□□□ 0.47
DDX56-209ENST00000473924 ADAMTS13Q76LX8 1427 aa18.01■□□□□ 0.47
DDX56-209ENST00000473924 NEUROD1Q13562 356 aa18.01■□□□□ 0.47
DDX56-209ENST00000473924 SIN3AQ96ST3 1273 aa18.01■□□□□ 0.47
DDX56-209ENST00000473924 SETBP1Q9Y6X0 1596 aa18■□□□□ 0.47
DDX56-209ENST00000473924 LTBP4Q8N2S1 1624 aa18■□□□□ 0.47
DDX56-209ENST00000473924 ADGRF5Q8IZF2 1346 aa17.99■□□□□ 0.47
DDX56-209ENST00000473924 DCAF11Q8TEB1 546 aa17.99■□□□□ 0.47
DDX56-209ENST00000473924 KDM2AQ9Y2K7 1162 aa17.99■□□□□ 0.47
DDX56-209ENST00000473924 CPS1P31327 1500 aa17.98■□□□□ 0.47
DDX56-209ENST00000473924 NRXN3Q9Y4C0 1643 aa17.98■□□□□ 0.47
DDX56-209ENST00000473924 CERKQ8TCT0 537 aa17.98■□□□□ 0.47
DDX56-209ENST00000473924 KCNA6P17658 529 aa17.97■□□□□ 0.47
DDX56-209ENST00000473924 MYOM2P54296 1465 aa17.96■□□□□ 0.47
DDX56-209ENST00000473924 PIK3R4Q99570 1358 aa17.95■□□□□ 0.46
DDX56-209ENST00000473924 STRCP1A6NGW2 1772 aa17.95■□□□□ 0.46
DDX56-209ENST00000473924 STAC3Q96MF2 364 aa17.95■□□□□ 0.46
DDX56-209ENST00000473924 ALKQ9UM73 1620 aa17.94■□□□□ 0.46
DDX56-209ENST00000473924 CHD2O14647 1828 aaKnown RBP17.93■□□□□ 0.46
DDX56-209ENST00000473924 METP08581 1390 aa17.93■□□□□ 0.46
DDX56-209ENST00000473924 PIK3C2GO75747 1445 aa17.93■□□□□ 0.46
DDX56-209ENST00000473924 PROSER2Q86WR7 435 aaPredicted RBP17.92■□□□□ 0.46
DDX56-209ENST00000473924 AMOTL2Q9Y2J4 779 aa17.92■□□□□ 0.46
DDX56-209ENST00000473924 NWD1Q149M9 1564 aa17.91■□□□□ 0.46
DDX56-209ENST00000473924 NRXN1Q9ULB1 1477 aa17.91■□□□□ 0.46
DDX56-209ENST00000473924 CCER1Q8TC90 406 aaPredicted RBP17.91■□□□□ 0.46
DDX56-209ENST00000473924 NKTRP30414 1462 aaKnown RBP17.9■□□□□ 0.46
DDX56-209ENST00000473924 LRRC7Q96NW7 1537 aa17.9■□□□□ 0.46
DDX56-209ENST00000473924 L3MBTL2Q969R5 705 aa17.9■□□□□ 0.46
DDX56-209ENST00000473924 CFAP70Q5T0N1 1121 aa17.89■□□□□ 0.45
DDX56-209ENST00000473924 TONSLQ96HA7 1378 aa17.89■□□□□ 0.45
DDX56-209ENST00000473924 SETD1AO15047 1707 aaKnown RBP17.89■□□□□ 0.45
DDX56-209ENST00000473924 PTPRUQ92729 1446 aa17.89■□□□□ 0.45
DDX56-209ENST00000473924 IQSEC2Q5JU85 1478 aa17.88■□□□□ 0.45
DDX56-209ENST00000473924 C14orf93Q9H972 538 aaKnown RBP17.88■□□□□ 0.45
DDX56-209ENST00000473924 LAMC1P11047 1609 aa17.87■□□□□ 0.45
DDX56-209ENST00000473924 RBM33Q96EV2 1170 aaKnown RBP17.87■□□□□ 0.45
DDX56-209ENST00000473924 CLSPNQ9HAW4 1339 aa17.87■□□□□ 0.45
DDX56-209ENST00000473924 TMEM132EQ6IEE7 984 aa17.86■□□□□ 0.45
DDX56-209ENST00000473924 TMEM94Q12767 1356 aa17.86■□□□□ 0.45
DDX56-209ENST00000473924 C14orf37Q86TY3 774 aa17.85■□□□□ 0.45
DDX56-209ENST00000473924 XRN1Q8IZH2 1706 aaKnown RBP17.85■□□□□ 0.45
DDX56-209ENST00000473924 STK26Q9P289 416 aa17.85■□□□□ 0.45
DDX56-209ENST00000473924 FBXO41Q8TF61 875 aa17.84■□□□□ 0.45
DDX56-209ENST00000473924 PRAG1Q86YV5 1406 aa17.82■□□□□ 0.44
DDX56-209ENST00000473924 UBAP1LF5GYI3 381 aa17.82■□□□□ 0.44
DDX56-209ENST00000473924 ASXL1Q8IXJ9 1541 aa17.82■□□□□ 0.44
DDX56-209ENST00000473924 XIRP1Q702N8 1843 aaKnown RBP17.82■□□□□ 0.44
DDX56-209ENST00000473924 YTHDC2Q9H6S0 1430 aaKnown RBP17.81■□□□□ 0.44
DDX56-209ENST00000473924 LRPPRCP42704 1394 aaKnown RBP17.8■□□□□ 0.44
DDX56-209ENST00000473924 PTCH1Q13635 1447 aa17.8■□□□□ 0.44
DDX56-209ENST00000473924 NCOA3Q9Y6Q9 1424 aa17.8■□□□□ 0.44
DDX56-209ENST00000473924 MSH6P52701 1360 aa17.79■□□□□ 0.44
DDX56-209ENST00000473924 TOM1O60784 492 aa17.79■□□□□ 0.44
DDX56-209ENST00000473924 ABCC11Q96J66 1382 aa17.79■□□□□ 0.44
DDX56-209ENST00000473924 ROBO2Q9HCK4 1378 aa17.79■□□□□ 0.44
DDX56-209ENST00000473924 ADGRB1O14514 1584 aa17.77■□□□□ 0.44
DDX56-209ENST00000473924 KIAA1210Q9ULL0 1709 aa17.77■□□□□ 0.44
DDX56-209ENST00000473924 KNDC1Q76NI1 1749 aa17.76■□□□□ 0.43
DDX56-209ENST00000473924 TECPR2O15040 1411 aa17.76■□□□□ 0.43
DDX56-209ENST00000473924 C19orf44Q9H6X5 657 aa17.76■□□□□ 0.43
DDX56-209ENST00000473924 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
DDX56-209ENST00000473924 TRAK1Q9UPV9 953 aa17.75■□□□□ 0.43
DDX56-209ENST00000473924 ATF3P18847 181 aa17.74■□□□□ 0.43
DDX56-209ENST00000473924 PIP4K2BP78356 416 aa17.74■□□□□ 0.43
DDX56-209ENST00000473924 NBPF1Q3BBV0 1214 aa17.74■□□□□ 0.43
DDX56-209ENST00000473924 WAPLQ7Z5K2 1190 aa17.74■□□□□ 0.43
DDX56-209ENST00000473924 TIMELESSQ9UNS1 1208 aa17.74■□□□□ 0.43
DDX56-209ENST00000473924 NBPF8Q3BBV2 869 aa17.73■□□□□ 0.43
DDX56-209ENST00000473924 POGKQ9P215 609 aa17.73■□□□□ 0.43
DDX56-209ENST00000473924 CADPS2Q86UW7 1296 aa17.72■□□□□ 0.43
DDX56-209ENST00000473924 SIRT1Q96EB6 747 aa17.72■□□□□ 0.43
DDX56-209ENST00000473924 PRAM1Q96QH2 718 aa17.72■□□□□ 0.43
DDX56-209ENST00000473924 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.72■□□□□ 0.43
DDX56-209ENST00000473924 TRPM1Q7Z4N2 1603 aa17.72■□□□□ 0.43
DDX56-209ENST00000473924 FAM135BQ49AJ0 1406 aa17.72■□□□□ 0.43
DDX56-209ENST00000473924 ADGRL3Q9HAR2 1447 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms