RNA–Protein interactions for RNA: ENST00000473791.1

CDK5RAP1-209, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 2

Gene CDK5RAP1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-209ENST00000473791 FOXD1Q16676 465 aa22.56■■□□□ 1.2
CDK5RAP1-209ENST00000473791 HRCP23327 699 aa22.55■■□□□ 1.2
CDK5RAP1-209ENST00000473791 CERKQ8TCT0 537 aa22.55■■□□□ 1.2
CDK5RAP1-209ENST00000473791 CPS1P31327 1500 aa22.54■■□□□ 1.2
CDK5RAP1-209ENST00000473791 NEXMIFQ5QGS0 1516 aa22.54■■□□□ 1.2
CDK5RAP1-209ENST00000473791 PLEKHG1Q9ULL1 1385 aa22.53■■□□□ 1.2
CDK5RAP1-209ENST00000473791 HDGFP51858 240 aaKnown RBP22.53■■□□□ 1.2
CDK5RAP1-209ENST00000473791 CCDC144AA2RUR9 1427 aa22.53■■□□□ 1.2
CDK5RAP1-209ENST00000473791 IQSEC2Q5JU85 1478 aa22.53■■□□□ 1.2
CDK5RAP1-209ENST00000473791 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.52■■□□□ 1.2
CDK5RAP1-209ENST00000473791 PPP1R15AO75807 674 aaPredicted RBP22.51■■□□□ 1.19
CDK5RAP1-209ENST00000473791 PPLO60437 1756 aa22.5■■□□□ 1.19
CDK5RAP1-209ENST00000473791 DIP2AQ14689 1571 aa22.5■■□□□ 1.19
CDK5RAP1-209ENST00000473791 ZNF326Q5BKZ1 582 aaKnown RBP22.48■■□□□ 1.19
CDK5RAP1-209ENST00000473791 NRXN3Q9Y4C0 1643 aa22.48■■□□□ 1.19
CDK5RAP1-209ENST00000473791 IFT172Q9UG01 1749 aa22.48■■□□□ 1.19
CDK5RAP1-209ENST00000473791 NWD1Q149M9 1564 aa22.46■■□□□ 1.19
CDK5RAP1-209ENST00000473791 SETBP1Q9Y6X0 1596 aa22.46■■□□□ 1.19
CDK5RAP1-209ENST00000473791 CHD2O14647 1828 aaKnown RBP22.45■■□□□ 1.19
CDK5RAP1-209ENST00000473791 NUTM2DQ5VT03 806 aaPredicted RBP22.45■■□□□ 1.18
CDK5RAP1-209ENST00000473791 BCANQ96GW7 911 aa22.44■■□□□ 1.18
CDK5RAP1-209ENST00000473791 SLC26A8Q96RN1 970 aa22.44■■□□□ 1.18
CDK5RAP1-209ENST00000473791 SPATA31E1Q6ZUB1 1445 aa22.43■■□□□ 1.18
CDK5RAP1-209ENST00000473791 ADAMTS13Q76LX8 1427 aa22.43■■□□□ 1.18
CDK5RAP1-209ENST00000473791 FBXO41Q8TF61 875 aa22.42■■□□□ 1.18
CDK5RAP1-209ENST00000473791 XIRP1Q702N8 1843 aaKnown RBP22.41■■□□□ 1.18
CDK5RAP1-209ENST00000473791 TRIM26Q12899 539 aaPredicted RBP22.41■■□□□ 1.18
CDK5RAP1-209ENST00000473791 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
CDK5RAP1-209ENST00000473791 LRRC7Q96NW7 1537 aa22.41■■□□□ 1.18
CDK5RAP1-209ENST00000473791 ANKRD30BQ9BXX2 1392 aa22.4■■□□□ 1.18
CDK5RAP1-209ENST00000473791 RPGRIP1LQ68CZ1 1315 aa22.39■■□□□ 1.18
CDK5RAP1-209ENST00000473791 NKTRP30414 1462 aaKnown RBP22.39■■□□□ 1.17
CDK5RAP1-209ENST00000473791 SETD1AO15047 1707 aaKnown RBP22.38■■□□□ 1.17
CDK5RAP1-209ENST00000473791 ILDR1Q86SU0 546 aaPredicted RBP22.37■■□□□ 1.17
CDK5RAP1-209ENST00000473791 TBX22Q9Y458 520 aa22.37■■□□□ 1.17
CDK5RAP1-209ENST00000473791 KCNA6P17658 529 aa22.35■■□□□ 1.17
CDK5RAP1-209ENST00000473791 PIK3R4Q99570 1358 aa22.35■■□□□ 1.17
CDK5RAP1-209ENST00000473791 XRN1Q8IZH2 1706 aaKnown RBP22.34■■□□□ 1.17
CDK5RAP1-209ENST00000473791 VGFO15240 615 aaPredicted RBP22.33■■□□□ 1.17
CDK5RAP1-209ENST00000473791 RGL3Q3MIN7 710 aa22.31■■□□□ 1.16
CDK5RAP1-209ENST00000473791 ALKQ9UM73 1620 aa22.31■■□□□ 1.16
CDK5RAP1-209ENST00000473791 MYOM2P54296 1465 aa22.28■■□□□ 1.16
CDK5RAP1-209ENST00000473791 PTPRUQ92729 1446 aa22.28■■□□□ 1.16
CDK5RAP1-209ENST00000473791 TMEM94Q12767 1356 aa22.26■■□□□ 1.15
CDK5RAP1-209ENST00000473791 LAMC1P11047 1609 aa22.26■■□□□ 1.15
CDK5RAP1-209ENST00000473791 METP08581 1390 aa22.25■■□□□ 1.15
CDK5RAP1-209ENST00000473791 PIK3C2GO75747 1445 aa22.25■■□□□ 1.15
CDK5RAP1-209ENST00000473791 ADGRF5Q8IZF2 1346 aa22.25■■□□□ 1.15
CDK5RAP1-209ENST00000473791 NRXN1Q9ULB1 1477 aa22.24■■□□□ 1.15
CDK5RAP1-209ENST00000473791 UBAP1LF5GYI3 381 aa22.24■■□□□ 1.15
CDK5RAP1-209ENST00000473791 PROSER2Q86WR7 435 aaPredicted RBP22.23■■□□□ 1.15
CDK5RAP1-209ENST00000473791 AMOTL2Q9Y2J4 779 aa22.21■■□□□ 1.15
CDK5RAP1-209ENST00000473791 DHX57Q6P158 1386 aaKnown RBP22.21■■□□□ 1.15
CDK5RAP1-209ENST00000473791 ASXL1Q8IXJ9 1541 aa22.2■■□□□ 1.14
CDK5RAP1-209ENST00000473791 TOM1O60784 492 aa22.19■■□□□ 1.14
CDK5RAP1-209ENST00000473791 PRAG1Q86YV5 1406 aa22.19■■□□□ 1.14
CDK5RAP1-209ENST00000473791 NCOA3Q9Y6Q9 1424 aa22.19■■□□□ 1.14
CDK5RAP1-209ENST00000473791 KNDC1Q76NI1 1749 aa22.19■■□□□ 1.14
CDK5RAP1-209ENST00000473791 PTCH1Q13635 1447 aa22.17■■□□□ 1.14
CDK5RAP1-209ENST00000473791 RBM33Q96EV2 1170 aaKnown RBP22.17■■□□□ 1.14
CDK5RAP1-209ENST00000473791 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.17■■□□□ 1.14
CDK5RAP1-209ENST00000473791 MSH6P52701 1360 aa22.16■■□□□ 1.14
CDK5RAP1-209ENST00000473791 PCGF6Q9BYE7 350 aa22.16■■□□□ 1.14
CDK5RAP1-209ENST00000473791 NALCNQ8IZF0 1738 aa22.16■■□□□ 1.14
CDK5RAP1-209ENST00000473791 SCAF1Q9H7N4 1312 aaKnown RBP22.11■■□□□ 1.13
CDK5RAP1-209ENST00000473791 PIP4K2BP78356 416 aa22.11■■□□□ 1.13
CDK5RAP1-209ENST00000473791 DCAF11Q8TEB1 546 aa22.11■■□□□ 1.13
CDK5RAP1-209ENST00000473791 STAC3Q96MF2 364 aa22.11■■□□□ 1.13
CDK5RAP1-209ENST00000473791 TECPR2O15040 1411 aa22.1■■□□□ 1.13
CDK5RAP1-209ENST00000473791 C14orf37Q86TY3 774 aa22.09■■□□□ 1.13
CDK5RAP1-209ENST00000473791 C14orf93Q9H972 538 aaKnown RBP22.09■■□□□ 1.13
CDK5RAP1-209ENST00000473791 LRPPRCP42704 1394 aaKnown RBP22.09■■□□□ 1.13
CDK5RAP1-209ENST00000473791 ROBO2Q9HCK4 1378 aa22.09■■□□□ 1.13
CDK5RAP1-209ENST00000473791 KIAA1210Q9ULL0 1709 aa22.09■■□□□ 1.13
CDK5RAP1-209ENST00000473791 ROBO1Q9Y6N7 1651 aa22.08■■□□□ 1.13
CDK5RAP1-209ENST00000473791 DCCP43146 1447 aa22.08■■□□□ 1.13
CDK5RAP1-209ENST00000473791 ADGRL3Q9HAR2 1447 aa22.08■■□□□ 1.13
CDK5RAP1-209ENST00000473791 KDM2AQ9Y2K7 1162 aa22.08■■□□□ 1.13
CDK5RAP1-209ENST00000473791 YTHDC2Q9H6S0 1430 aaKnown RBP22.07■■□□□ 1.12
CDK5RAP1-209ENST00000473791 ADGRB1O14514 1584 aa22.07■■□□□ 1.12
CDK5RAP1-209ENST00000473791 CFAP70Q5T0N1 1121 aa22.06■■□□□ 1.12
CDK5RAP1-209ENST00000473791 TMEM132EQ6IEE7 984 aa22.05■■□□□ 1.12
CDK5RAP1-209ENST00000473791 SIN3AQ96ST3 1273 aa22.05■■□□□ 1.12
CDK5RAP1-209ENST00000473791 C19orf44Q9H6X5 657 aa22.05■■□□□ 1.12
CDK5RAP1-209ENST00000473791 ABCC11Q96J66 1382 aa22.04■■□□□ 1.12
CDK5RAP1-209ENST00000473791 FAM135BQ49AJ0 1406 aa22.03■■□□□ 1.12
CDK5RAP1-209ENST00000473791 CADPS2Q86UW7 1296 aa22.02■■□□□ 1.12
CDK5RAP1-209ENST00000473791 DLC1Q96QB1 1528 aa22.01■■□□□ 1.11
CDK5RAP1-209ENST00000473791 CDC42BPGQ6DT37 1551 aa22.01■■□□□ 1.11
CDK5RAP1-209ENST00000473791 ATF3P18847 181 aa22.01■■□□□ 1.11
CDK5RAP1-209ENST00000473791 STK26Q9P289 416 aa22.01■■□□□ 1.11
CDK5RAP1-209ENST00000473791 NEUROD1Q13562 356 aa22■■□□□ 1.11
CDK5RAP1-209ENST00000473791 ARHGEF28Q8N1W1 1705 aaKnown RBP21.99■■□□□ 1.11
CDK5RAP1-209ENST00000473791 SLAIN2Q9P270 581 aa21.98■■□□□ 1.11
CDK5RAP1-209ENST00000473791 MST1RQ04912 1400 aa21.97■■□□□ 1.11
CDK5RAP1-209ENST00000473791 HSPA1LP34931 641 aa21.97■■□□□ 1.11
CDK5RAP1-209ENST00000473791 L3MBTL2Q969R5 705 aa21.97■■□□□ 1.11
CDK5RAP1-209ENST00000473791 TRPM1Q7Z4N2 1603 aa21.96■■□□□ 1.11
CDK5RAP1-209ENST00000473791 PHLPP1O60346 1717 aa21.96■■□□□ 1.11
CDK5RAP1-209ENST00000473791 PLEKHH1Q9ULM0 1364 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms