RNA–Protein interactions for RNA: ENST00000471779.1

DMD-219, Transcript of dystrophin, humanhuman

TSL 1 (best)

Gene DMD, Length 362 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-219ENST00000471779 PLCB2Q00722 1185 aa4.68□□□□□ -1.66
DMD-219ENST00000471779 MRC2Q9UBG0 1479 aa4.68□□□□□ -1.66
DMD-219ENST00000471779 RNF223E7ERA6 249 aa4.67□□□□□ -1.66
DMD-219ENST00000471779 APLP1P51693 650 aa4.67□□□□□ -1.66
DMD-219ENST00000471779 PPP1R15BQ5SWA1 713 aa4.67□□□□□ -1.66
DMD-219ENST00000471779 TYW1BQ6NUM6 668 aa4.67□□□□□ -1.66
DMD-219ENST00000471779 ZSCAN1Q8NBB4 408 aa4.67□□□□□ -1.66
DMD-219ENST00000471779 CUX2O14529 1486 aa4.67□□□□□ -1.66
DMD-219ENST00000471779 RNF40O75150 1001 aa4.66□□□□□ -1.66
DMD-219ENST00000471779 KCTD17Q8N5Z5 321 aa4.66□□□□□ -1.66
DMD-219ENST00000471779 SOGA1O94964 1423 aa4.65□□□□□ -1.66
DMD-219ENST00000471779 LORP23490 312 aaPredicted RBP4.65□□□□□ -1.67
DMD-219ENST00000471779 CRIPAKQ8N1N5 446 aa4.65□□□□□ -1.67
DMD-219ENST00000471779 FBXW7Q969H0 707 aa4.65□□□□□ -1.67
DMD-219ENST00000471779 WRNQ14191 1432 aaPredicted RBP eCLIP4.64□□□□□ -1.67
DMD-219ENST00000471779 KIF21AQ7Z4S6 1674 aa4.64□□□□□ -1.67
DMD-219ENST00000471779 SMAPO00193 183 aa4.64□□□□□ -1.67
DMD-219ENST00000471779 AXIN1O15169 862 aa4.64□□□□□ -1.67
DMD-219ENST00000471779 C6orf132Q5T0Z8 1188 aa4.64□□□□□ -1.67
DMD-219ENST00000471779 XP32Q5T750 250 aa4.64□□□□□ -1.67
DMD-219ENST00000471779 LIAT1Q6ZQX7 453 aa4.64□□□□□ -1.67
DMD-219ENST00000471779 PPEF1O14829 653 aaPredicted RBP4.63□□□□□ -1.67
DMD-219ENST00000471779 SNRPBP14678 240 aaKnown RBP4.63□□□□□ -1.67
DMD-219ENST00000471779 MAP3K9P80192 1104 aa4.63□□□□□ -1.67
DMD-219ENST00000471779 PKD2Q13563 968 aa4.63□□□□□ -1.67
DMD-219ENST00000471779 FAM9AQ8IZU1 332 aaPredicted RBP4.63□□□□□ -1.67
DMD-219ENST00000471779 CHMP7Q8WUX9 453 aaPredicted RBP4.63□□□□□ -1.67
DMD-219ENST00000471779 KRTAP4-8Q9BYQ9 185 aa4.63□□□□□ -1.67
DMD-219ENST00000471779 TOPBP1Q92547 1522 aa4.62□□□□□ -1.67
DMD-219ENST00000471779 PHF14O94880 888 aa4.62□□□□□ -1.67
DMD-219ENST00000471779 GMPRP36959 345 aa4.62□□□□□ -1.67
DMD-219ENST00000471779 TSKSQ9UJT2 592 aa4.62□□□□□ -1.67
DMD-219ENST00000471779 TDRD9Q8NDG6 1382 aaKnown RBP4.62□□□□□ -1.67
DMD-219ENST00000471779 IFT140Q96RY7 1462 aa4.62□□□□□ -1.67
DMD-219ENST00000471779 URB2Q14146 1524 aaKnown RBP4.62□□□□□ -1.67
DMD-219ENST00000471779 PRDM2Q13029 1718 aa4.61□□□□□ -1.67
DMD-219ENST00000471779 ZPR1O75312 459 aa4.61□□□□□ -1.67
DMD-219ENST00000471779 FOXC1Q12948 553 aa4.61□□□□□ -1.67
DMD-219ENST00000471779 PACS2Q86VP3 889 aa4.61□□□□□ -1.67
DMD-219ENST00000471779 RBM33Q96EV2 1170 aaKnown RBP4.61□□□□□ -1.67
DMD-219ENST00000471779 CRISPLD2Q9H0B8 497 aa4.61□□□□□ -1.67
DMD-219ENST00000471779 WDR62O43379 1518 aa4.61□□□□□ -1.67
DMD-219ENST00000471779 DNMBPQ6XZF7 1577 aa4.61□□□□□ -1.67
DMD-219ENST00000471779 AVPP01185 164 aa4.59□□□□□ -1.67
DMD-219ENST00000471779 HAP1P54257 671 aaPredicted RBP4.59□□□□□ -1.67
DMD-219ENST00000471779 FGD5Q6ZNL6 1462 aa4.59□□□□□ -1.67
DMD-219ENST00000471779 ANKLE1Q8NAG6 615 aa4.59□□□□□ -1.67
DMD-219ENST00000471779 PKD2L1Q9P0L9 805 aa4.59□□□□□ -1.67
DMD-219ENST00000471779 KDM2AQ9Y2K7 1162 aa4.59□□□□□ -1.67
DMD-219ENST00000471779 RAD54L2Q9Y4B4 1467 aa4.59□□□□□ -1.67
DMD-219ENST00000471779 THOC2Q8NI27 1593 aaKnown RBP4.58□□□□□ -1.68
DMD-219ENST00000471779 AQRO60306 1485 aaKnown RBP eCLIP4.58□□□□□ -1.68
DMD-219ENST00000471779 POLA1P09884 1462 aaPredicted RBP4.58□□□□□ -1.68
DMD-219ENST00000471779 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.58□□□□□ -1.68
DMD-219ENST00000471779 TLL1O43897 1013 aa4.58□□□□□ -1.68
DMD-219ENST00000471779 CTC1Q2NKJ3 1217 aa4.58□□□□□ -1.68
DMD-219ENST00000471779 CUX1P39880 1505 aa4.57□□□□□ -1.68
DMD-219ENST00000471779 S1PR4O95977 384 aa4.57□□□□□ -1.68
DMD-219ENST00000471779 SLC16A10Q8TF71 515 aa4.57□□□□□ -1.68
DMD-219ENST00000471779 TOP2BQ02880 1626 aa4.57□□□□□ -1.68
DMD-219ENST00000471779 KIF27Q86VH2 1401 aa4.56□□□□□ -1.68
DMD-219ENST00000471779 UBTFP17480 764 aaKnown RBP4.56□□□□□ -1.68
DMD-219ENST00000471779 DNAJC5Q9H3Z4 198 aa4.56□□□□□ -1.68
DMD-219ENST00000471779 ATP13A2Q9NQ11 1180 aa4.56□□□□□ -1.68
DMD-219ENST00000471779 GRIN2BQ13224 1484 aa4.56□□□□□ -1.68
DMD-219ENST00000471779 GAPVD1Q14C86 1478 aa4.56□□□□□ -1.68
DMD-219ENST00000471779 KRTAP9-6A0A140TA67 174 aa4.55□□□□□ -1.68
DMD-219ENST00000471779 C3orf80F5H4A9 247 aa4.55□□□□□ -1.68
DMD-219ENST00000471779 SMCPP49901 116 aaPredicted RBP4.55□□□□□ -1.68
DMD-219ENST00000471779 PLA2G2CQ5R387 149 aa4.55□□□□□ -1.68
DMD-219ENST00000471779 TRIM47Q96LD4 638 aa4.55□□□□□ -1.68
DMD-219ENST00000471779 EPAS1Q99814 870 aa4.55□□□□□ -1.68
DMD-219ENST00000471779 KRTAP9-2Q9BYQ4 174 aa4.55□□□□□ -1.68
DMD-219ENST00000471779 ZNF608Q9ULD9 1512 aaPredicted RBP4.55□□□□□ -1.68
DMD-219ENST00000471779 NCKAP5LQ9HCH0 1330 aa4.54□□□□□ -1.68
DMD-219ENST00000471779 GSK3AP49840 483 aa4.54□□□□□ -1.68
DMD-219ENST00000471779 KCNMA1Q12791 1236 aa4.54□□□□□ -1.68
DMD-219ENST00000471779 EMILIN3Q9NT22 766 aa4.54□□□□□ -1.68
DMD-219ENST00000471779 TOR4AQ9NXH8 423 aa4.54□□□□□ -1.68
DMD-219ENST00000471779 ABCA10Q8WWZ4 1543 aa4.54□□□□□ -1.68
DMD-219ENST00000471779 IGF1RP08069 1367 aa4.53□□□□□ -1.68
DMD-219ENST00000471779 CARMIL1Q5VZK9 1371 aa4.53□□□□□ -1.68
DMD-219ENST00000471779 SYNJ1O43426 1573 aa4.53□□□□□ -1.68
DMD-219ENST00000471779 VEGFBP49765 207 aa4.53□□□□□ -1.68
DMD-219ENST00000471779 HDGFP51858 240 aaKnown RBP4.53□□□□□ -1.68
DMD-219ENST00000471779 TSR1Q2NL82 804 aaKnown RBP4.53□□□□□ -1.68
DMD-219ENST00000471779 BLOC1S3Q6QNY0 202 aa4.53□□□□□ -1.68
DMD-219ENST00000471779 KRTAP1-3Q8IUG1 177 aa4.53□□□□□ -1.68
DMD-219ENST00000471779 CYP4X1Q8N118 509 aa4.53□□□□□ -1.68
DMD-219ENST00000471779 SENP2Q9HC62 589 aa4.53□□□□□ -1.68
DMD-219ENST00000471779 FAM198AQ9UFP1 575 aa4.53□□□□□ -1.68
DMD-219ENST00000471779 PNMA3Q9UL41 463 aa4.53□□□□□ -1.68
DMD-219ENST00000471779 PCDHB3Q9Y5E6 796 aa4.53□□□□□ -1.68
DMD-219ENST00000471779 BIVM-ERCC5R4GMW8 1640 aa4.53□□□□□ -1.68
DMD-219ENST00000471779 PDE4AP27815 886 aa4.52□□□□□ -1.69
DMD-219ENST00000471779 LMOD2Q6P5Q4 547 aa4.52□□□□□ -1.69
DMD-219ENST00000471779 IRF7Q92985 503 aa4.52□□□□□ -1.69
DMD-219ENST00000471779 PSMG3-AS1Q96PY0 264 aa4.52□□□□□ -1.69
DMD-219ENST00000471779 TARBP1Q13395 1621 aaKnown RBP4.52□□□□□ -1.69
DMD-219ENST00000471779 FHAD1B1AJZ9 1412 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms