RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 HFM1A2PYH4 1435 aa22.65■■□□□ 1.22
VPS8-221ENST00000471655 SLC26A8Q96RN1 970 aa22.64■■□□□ 1.21
VPS8-221ENST00000471655 ALKQ9UM73 1620 aa22.64■■□□□ 1.21
VPS8-221ENST00000471655 PIP4K2BP78356 416 aa22.62■■□□□ 1.21
VPS8-221ENST00000471655 CHGAP10645 457 aaKnown RBP22.61■■□□□ 1.21
VPS8-221ENST00000471655 PPP1R15AO75807 674 aaPredicted RBP22.6■■□□□ 1.21
VPS8-221ENST00000471655 BCANQ96GW7 911 aa22.59■■□□□ 1.21
VPS8-221ENST00000471655 TBX22Q9Y458 520 aa22.59■■□□□ 1.21
VPS8-221ENST00000471655 SPHKAPQ2M3C7 1700 aa22.59■■□□□ 1.21
VPS8-221ENST00000471655 SCAF1Q9H7N4 1312 aaKnown RBP22.58■■□□□ 1.21
VPS8-221ENST00000471655 XIRP1Q702N8 1843 aaKnown RBP22.58■■□□□ 1.21
VPS8-221ENST00000471655 NWD1Q149M9 1564 aa22.58■■□□□ 1.2
VPS8-221ENST00000471655 NKTRP30414 1462 aaKnown RBP22.56■■□□□ 1.2
VPS8-221ENST00000471655 HSPA1LP34931 641 aa22.56■■□□□ 1.2
VPS8-221ENST00000471655 TMEM94Q12767 1356 aa22.55■■□□□ 1.2
VPS8-221ENST00000471655 DISP3Q9P2K9 1392 aa22.54■■□□□ 1.2
VPS8-221ENST00000471655 PROSER2Q86WR7 435 aaPredicted RBP22.54■■□□□ 1.2
VPS8-221ENST00000471655 CHD2O14647 1828 aaKnown RBP22.52■■□□□ 1.2
VPS8-221ENST00000471655 TRPM2O94759 1503 aa22.52■■□□□ 1.2
VPS8-221ENST00000471655 DIP2AQ14689 1571 aa22.52■■□□□ 1.2
VPS8-221ENST00000471655 ADAMTS13Q76LX8 1427 aa22.52■■□□□ 1.2
VPS8-221ENST00000471655 TRIM52Q96A61 297 aa22.52■■□□□ 1.2
VPS8-221ENST00000471655 PIK3R4Q99570 1358 aa22.5■■□□□ 1.19
VPS8-221ENST00000471655 NUTM2DQ5VT03 806 aaPredicted RBP22.5■■□□□ 1.19
VPS8-221ENST00000471655 CLTCL1P53675 1640 aa22.48■■□□□ 1.19
VPS8-221ENST00000471655 SLC4A1APQ9BWU0 796 aaKnown RBP22.47■■□□□ 1.19
VPS8-221ENST00000471655 SENP3Q9H4L4 574 aaPredicted RBP22.47■■□□□ 1.19
VPS8-221ENST00000471655 NCOA3Q9Y6Q9 1424 aa22.47■■□□□ 1.19
VPS8-221ENST00000471655 FAM135BQ49AJ0 1406 aa22.46■■□□□ 1.19
VPS8-221ENST00000471655 ZNF326Q5BKZ1 582 aaKnown RBP22.45■■□□□ 1.18
VPS8-221ENST00000471655 ACIN1Q9UKV3 1341 aaKnown RBP22.44■■□□□ 1.18
VPS8-221ENST00000471655 SETBP1Q9Y6X0 1596 aa22.43■■□□□ 1.18
VPS8-221ENST00000471655 RBM33Q96EV2 1170 aaKnown RBP22.43■■□□□ 1.18
VPS8-221ENST00000471655 KIF1BO60333 1816 aa22.43■■□□□ 1.18
VPS8-221ENST00000471655 MSH6P52701 1360 aa22.42■■□□□ 1.18
VPS8-221ENST00000471655 NRXN3Q9Y4C0 1643 aa22.41■■□□□ 1.18
VPS8-221ENST00000471655 NEXMIFQ5QGS0 1516 aa22.41■■□□□ 1.18
VPS8-221ENST00000471655 AMOTL2Q9Y2J4 779 aa22.39■■□□□ 1.17
VPS8-221ENST00000471655 RPGRIP1LQ68CZ1 1315 aa22.38■■□□□ 1.17
VPS8-221ENST00000471655 ILDR2Q71H61 639 aa22.38■■□□□ 1.17
VPS8-221ENST00000471655 PTPRUQ92729 1446 aa22.38■■□□□ 1.17
VPS8-221ENST00000471655 VGFO15240 615 aaPredicted RBP22.36■■□□□ 1.17
VPS8-221ENST00000471655 MPHOSPH9Q99550 1183 aa22.36■■□□□ 1.17
VPS8-221ENST00000471655 SLAIN2Q9P270 581 aa22.36■■□□□ 1.17
VPS8-221ENST00000471655 MED1Q15648 1581 aaPredicted RBP22.35■■□□□ 1.17
VPS8-221ENST00000471655 C19orf44Q9H6X5 657 aa22.34■■□□□ 1.17
VPS8-221ENST00000471655 ROBO1Q9Y6N7 1651 aa22.33■■□□□ 1.17
VPS8-221ENST00000471655 SETD5Q9C0A6 1442 aa22.33■■□□□ 1.17
VPS8-221ENST00000471655 METP08581 1390 aa22.33■■□□□ 1.17
VPS8-221ENST00000471655 XRN1Q8IZH2 1706 aaKnown RBP22.32■■□□□ 1.16
VPS8-221ENST00000471655 FOXD1Q16676 465 aa22.31■■□□□ 1.16
VPS8-221ENST00000471655 CADPS2Q86UW7 1296 aa22.31■■□□□ 1.16
VPS8-221ENST00000471655 C14orf37Q86TY3 774 aa22.3■■□□□ 1.16
VPS8-221ENST00000471655 CCDC144AA2RUR9 1427 aa22.29■■□□□ 1.16
VPS8-221ENST00000471655 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.28■■□□□ 1.16
VPS8-221ENST00000471655 ATF3P18847 181 aa22.27■■□□□ 1.16
VPS8-221ENST00000471655 DCCP43146 1447 aa22.27■■□□□ 1.16
VPS8-221ENST00000471655 PPLO60437 1756 aa22.26■■□□□ 1.15
VPS8-221ENST00000471655 SPATA31E1Q6ZUB1 1445 aa22.25■■□□□ 1.15
VPS8-221ENST00000471655 SOCS7O14512 581 aa22.24■■□□□ 1.15
VPS8-221ENST00000471655 SETD1AO15047 1707 aaKnown RBP22.23■■□□□ 1.15
VPS8-221ENST00000471655 RAB3GAP2Q9H2M9 1393 aa22.23■■□□□ 1.15
VPS8-221ENST00000471655 PRAG1Q86YV5 1406 aa22.23■■□□□ 1.15
VPS8-221ENST00000471655 ANKRD30BQ9BXX2 1392 aa22.21■■□□□ 1.15
VPS8-221ENST00000471655 PTCH1Q13635 1447 aa22.2■■□□□ 1.14
VPS8-221ENST00000471655 HRCP23327 699 aa22.19■■□□□ 1.14
VPS8-221ENST00000471655 PHF23Q9BUL5 403 aaPredicted RBP22.19■■□□□ 1.14
VPS8-221ENST00000471655 ADGRL3Q9HAR2 1447 aa22.19■■□□□ 1.14
VPS8-221ENST00000471655 PHLPP1O60346 1717 aa22.19■■□□□ 1.14
VPS8-221ENST00000471655 RGL3Q3MIN7 710 aa22.18■■□□□ 1.14
VPS8-221ENST00000471655 ADGRF5Q8IZF2 1346 aa22.17■■□□□ 1.14
VPS8-221ENST00000471655 IFT172Q9UG01 1749 aa22.16■■□□□ 1.14
VPS8-221ENST00000471655 AHDC1Q5TGY3 1603 aaPredicted RBP22.16■■□□□ 1.14
VPS8-221ENST00000471655 MST1RQ04912 1400 aa22.15■■□□□ 1.14
VPS8-221ENST00000471655 JCADQ9P266 1359 aa22.15■■□□□ 1.14
VPS8-221ENST00000471655 BRINP3Q76B58 766 aa22.15■■□□□ 1.14
VPS8-221ENST00000471655 COL16A1Q07092 1604 aaPredicted RBP22.15■■□□□ 1.14
VPS8-221ENST00000471655 ROBO2Q9HCK4 1378 aa22.13■■□□□ 1.13
VPS8-221ENST00000471655 NALCNQ8IZF0 1738 aa22.12■■□□□ 1.13
VPS8-221ENST00000471655 PIK3C2GO75747 1445 aa22.1■■□□□ 1.13
VPS8-221ENST00000471655 RGS17Q9UGC6 210 aaPredicted RBP22.09■■□□□ 1.13
VPS8-221ENST00000471655 ASXL1Q8IXJ9 1541 aa22.09■■□□□ 1.13
VPS8-221ENST00000471655 SPATA31A6Q5VVP1 1343 aa22.07■■□□□ 1.12
VPS8-221ENST00000471655 TECPR2O15040 1411 aa22.07■■□□□ 1.12
VPS8-221ENST00000471655 LRPPRCP42704 1394 aaKnown RBP22.07■■□□□ 1.12
VPS8-221ENST00000471655 NRXN1Q9ULB1 1477 aa22.07■■□□□ 1.12
VPS8-221ENST00000471655 ABCC11Q96J66 1382 aa22.06■■□□□ 1.12
VPS8-221ENST00000471655 MYOM2P54296 1465 aa22.05■■□□□ 1.12
VPS8-221ENST00000471655 C1orf167Q5SNV9 1468 aa22.05■■□□□ 1.12
VPS8-221ENST00000471655 C14orf93Q9H972 538 aaKnown RBP22.05■■□□□ 1.12
VPS8-221ENST00000471655 NHSL1Q5SYE7 1610 aa22.05■■□□□ 1.12
VPS8-221ENST00000471655 SHPRHQ149N8 1683 aa22.04■■□□□ 1.12
VPS8-221ENST00000471655 SIRT1Q96EB6 747 aa22.02■■□□□ 1.12
VPS8-221ENST00000471655 KNDC1Q76NI1 1749 aa22.01■■□□□ 1.11
VPS8-221ENST00000471655 TMEM132EQ6IEE7 984 aa22.01■■□□□ 1.11
VPS8-221ENST00000471655 LRRC59Q96AG4 307 aaKnown RBP22.01■■□□□ 1.11
VPS8-221ENST00000471655 YTHDC2Q9H6S0 1430 aaKnown RBP22■■□□□ 1.11
VPS8-221ENST00000471655 LAMC1P11047 1609 aa22■■□□□ 1.11
VPS8-221ENST00000471655 STK26Q9P289 416 aa22■■□□□ 1.11
VPS8-221ENST00000471655 CDC42BPGQ6DT37 1551 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms