RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 CHMP4CQ96CF2 233 aa19.44■□□□□ 0.7
BRAT1-204ENST00000469750 SF3A1Q15459 793 aaKnown RBP19.43■□□□□ 0.7
BRAT1-204ENST00000469750 KIF7Q2M1P5 1343 aa19.43■□□□□ 0.7
BRAT1-204ENST00000469750 GRIN2BQ13224 1484 aa19.43■□□□□ 0.7
BRAT1-204ENST00000469750 DZIP1LQ8IYY4 767 aaKnown RBP19.43■□□□□ 0.7
BRAT1-204ENST00000469750 RSPH6AQ9H0K4 717 aa19.43■□□□□ 0.7
BRAT1-204ENST00000469750 PHF14O94880 888 aa19.42■□□□□ 0.7
BRAT1-204ENST00000469750 LRRFIP1Q32MZ4 808 aaKnown RBP19.42■□□□□ 0.7
BRAT1-204ENST00000469750 DIAPH3Q9NSV4 1193 aa19.42■□□□□ 0.7
BRAT1-204ENST00000469750 MIA2Q96PC5 1412 aa19.42■□□□□ 0.7
BRAT1-204ENST00000469750 DDX58O95786 925 aaKnown RBP19.41■□□□□ 0.7
BRAT1-204ENST00000469750 ROCK1Q13464 1354 aa19.4■□□□□ 0.7
BRAT1-204ENST00000469750 FOXD4L5Q5VV16 416 aaPredicted RBP19.4■□□□□ 0.7
BRAT1-204ENST00000469750 FOXD4L4Q8WXT5 416 aaPredicted RBP19.4■□□□□ 0.7
BRAT1-204ENST00000469750 DDX11L8A8MPP1 907 aa19.4■□□□□ 0.7
BRAT1-204ENST00000469750 H3BQV1 296 aa19.4■□□□□ 0.7
BRAT1-204ENST00000469750 IFFO2Q5TF58 517 aa19.4■□□□□ 0.7
BRAT1-204ENST00000469750 GNAI1P63096 354 aa19.39■□□□□ 0.7
BRAT1-204ENST00000469750 RUFY2Q8WXA3 655 aa19.39■□□□□ 0.7
BRAT1-204ENST00000469750 FAM184AQ8NB25 1140 aa19.39■□□□□ 0.69
BRAT1-204ENST00000469750 NECTIN2Q92692 538 aa19.39■□□□□ 0.69
BRAT1-204ENST00000469750 FKBP5Q13451 457 aaPredicted RBP19.38■□□□□ 0.69
BRAT1-204ENST00000469750 ARHGAP5Q13017 1502 aa19.38■□□□□ 0.69
BRAT1-204ENST00000469750 MARCH6O60337 910 aa19.38■□□□□ 0.69
BRAT1-204ENST00000469750 NCBP3Q53F19 620 aaKnown RBP19.38■□□□□ 0.69
BRAT1-204ENST00000469750 VSIG10Q8N0Z9 540 aa19.38■□□□□ 0.69
BRAT1-204ENST00000469750 ATP6V1DQ9Y5K8 247 aa19.38■□□□□ 0.69
BRAT1-204ENST00000469750 REC8O95072 547 aa19.37■□□□□ 0.69
BRAT1-204ENST00000469750 HSP90AA2PQ14568 343 aaPredicted RBP19.37■□□□□ 0.69
BRAT1-204ENST00000469750 GGNBP2Q9H3C7 697 aa19.37■□□□□ 0.69
BRAT1-204ENST00000469750 AFAP1Q8N556 730 aa19.37■□□□□ 0.69
BRAT1-204ENST00000469750 IFIT2P09913 472 aaKnown RBP19.36■□□□□ 0.69
BRAT1-204ENST00000469750 SYNJ2O15056 1496 aa19.36■□□□□ 0.69
BRAT1-204ENST00000469750 CABP2Q9NPB3 220 aa19.36■□□□□ 0.69
BRAT1-204ENST00000469750 TSPYL4Q9UJ04 414 aa19.36■□□□□ 0.69
BRAT1-204ENST00000469750 TMEM132EQ6IEE7 984 aa19.35■□□□□ 0.69
BRAT1-204ENST00000469750 RAPGEF4Q8WZA2 1011 aa19.35■□□□□ 0.69
BRAT1-204ENST00000469750 CNTLNQ9NXG0 1405 aa19.35■□□□□ 0.69
BRAT1-204ENST00000469750 AKAP17AQ02040 695 aaKnown RBP19.35■□□□□ 0.69
BRAT1-204ENST00000469750 ATF3P18847 181 aa19.35■□□□□ 0.69
BRAT1-204ENST00000469750 HMOX1P09601 288 aa19.35■□□□□ 0.69
BRAT1-204ENST00000469750 ZKSCAN1P17029 563 aaPredicted RBP19.34■□□□□ 0.69
BRAT1-204ENST00000469750 SYNE3Q6ZMZ3 975 aa19.34■□□□□ 0.69
BRAT1-204ENST00000469750 SYTL4Q96C24 671 aaPredicted RBP19.34■□□□□ 0.69
BRAT1-204ENST00000469750 CREBRFQ8IUR6 639 aa19.34■□□□□ 0.69
BRAT1-204ENST00000469750 TNNT3P45378 269 aaPredicted RBP19.34■□□□□ 0.69
BRAT1-204ENST00000469750 RRBP1Q9P2E9 1410 aaKnown RBP19.34■□□□□ 0.69
BRAT1-204ENST00000469750 CPLX2Q6PUV4 134 aaKnown RBP19.33■□□□□ 0.69
BRAT1-204ENST00000469750 G3BP1Q13283 466 aaKnown RBP eCLIP19.33■□□□□ 0.68
BRAT1-204ENST00000469750 MSH5O43196 834 aa19.32■□□□□ 0.68
BRAT1-204ENST00000469750 VPS53Q5VIR6 699 aa19.32■□□□□ 0.68
BRAT1-204ENST00000469750 ERICH3Q5RHP9 1530 aa19.32■□□□□ 0.68
BRAT1-204ENST00000469750 NOC3LQ8WTT2 800 aaKnown RBP19.32■□□□□ 0.68
BRAT1-204ENST00000469750 NOL10Q9BSC4 688 aaKnown RBP19.31■□□□□ 0.68
BRAT1-204ENST00000469750 PRG4Q92954 1404 aaPredicted RBP19.31■□□□□ 0.68
BRAT1-204ENST00000469750 DDX49Q9Y6V7 483 aaKnown RBP19.31■□□□□ 0.68
BRAT1-204ENST00000469750 AMOTL1Q8IY63 956 aa19.3■□□□□ 0.68
BRAT1-204ENST00000469750 USP35Q9P2H5 1018 aa19.3■□□□□ 0.68
BRAT1-204ENST00000469750 HSP90AB4PQ58FF6 505 aa19.3■□□□□ 0.68
BRAT1-204ENST00000469750 CFAP70Q5T0N1 1121 aa19.3■□□□□ 0.68
BRAT1-204ENST00000469750 SLC4A3P48751 1232 aa19.29■□□□□ 0.68
BRAT1-204ENST00000469750 NLRP6P59044 892 aa19.29■□□□□ 0.68
BRAT1-204ENST00000469750 CFTRP13569 1480 aa19.29■□□□□ 0.68
BRAT1-204ENST00000469750 CC2D2AQ9P2K1 1620 aa19.29■□□□□ 0.68
BRAT1-204ENST00000469750 SKOR2Q2VWA4 1001 aaPredicted RBP19.29■□□□□ 0.68
BRAT1-204ENST00000469750 NLRP2Q9NX02 1062 aa19.28■□□□□ 0.68
BRAT1-204ENST00000469750 BRD4O60885 1362 aaPredicted RBP19.28■□□□□ 0.68
BRAT1-204ENST00000469750 AAMPQ13685 434 aa19.27■□□□□ 0.68
BRAT1-204ENST00000469750 ANO2Q9NQ90 1003 aa19.27■□□□□ 0.68
BRAT1-204ENST00000469750 ARAP1Q96P48 1450 aa19.27■□□□□ 0.68
BRAT1-204ENST00000469750 RNF20Q5VTR2 975 aa19.27■□□□□ 0.68
BRAT1-204ENST00000469750 MCTP1Q6DN14 999 aa19.27■□□□□ 0.68
BRAT1-204ENST00000469750 APPP05067 770 aa19.27■□□□□ 0.67
BRAT1-204ENST00000469750 MTHFSP49914 203 aa19.27■□□□□ 0.67
BRAT1-204ENST00000469750 TPM3P06753 285 aa19.26■□□□□ 0.67
BRAT1-204ENST00000469750 FOXD4L6Q3SYB3 417 aaPredicted RBP19.26■□□□□ 0.67
BRAT1-204ENST00000469750 NUTM2GQ5VZR2 741 aa19.26■□□□□ 0.67
BRAT1-204ENST00000469750 FOXD4L3Q6VB84 417 aaPredicted RBP19.26■□□□□ 0.67
BRAT1-204ENST00000469750 VPS37DQ86XT2 251 aa19.26■□□□□ 0.67
BRAT1-204ENST00000469750 HFM1A2PYH4 1435 aa19.25■□□□□ 0.67
BRAT1-204ENST00000469750 TPD52L1Q16890 204 aaPredicted RBP19.25■□□□□ 0.67
BRAT1-204ENST00000469750 WASHC2AQ641Q2 1341 aa19.25■□□□□ 0.67
BRAT1-204ENST00000469750 BICRAQ9NZM4 1560 aa19.25■□□□□ 0.67
BRAT1-204ENST00000469750 TRIM29Q14134 588 aa19.24■□□□□ 0.67
BRAT1-204ENST00000469750 MEX3CQ5U5Q3 659 aaKnown RBP19.24■□□□□ 0.67
BRAT1-204ENST00000469750 RIC3Q7Z5B4 369 aa19.24■□□□□ 0.67
BRAT1-204ENST00000469750 MRC2Q9UBG0 1479 aa19.24■□□□□ 0.67
BRAT1-204ENST00000469750 CPLX1O14810 134 aa19.24■□□□□ 0.67
BRAT1-204ENST00000469750 TRDNQ13061 729 aa19.24■□□□□ 0.67
BRAT1-204ENST00000469750 INTS3Q68E01 1043 aaKnown RBP19.24■□□□□ 0.67
BRAT1-204ENST00000469750 ADAMTS8Q9UP79 889 aa19.24■□□□□ 0.67
BRAT1-204ENST00000469750 GOLGA6L19H0YKK7 550 aa19.24■□□□□ 0.67
BRAT1-204ENST00000469750 ERC2O15083 957 aa19.24■□□□□ 0.67
BRAT1-204ENST00000469750 BECN2A8MW95 431 aa19.23■□□□□ 0.67
BRAT1-204ENST00000469750 TXNDC2Q86VQ3 553 aa19.23■□□□□ 0.67
BRAT1-204ENST00000469750 LNPKQ9C0E8 428 aa19.23■□□□□ 0.67
BRAT1-204ENST00000469750 GPRASP1Q5JY77 1395 aa19.23■□□□□ 0.67
BRAT1-204ENST00000469750 EFCAB5A4FU69 1503 aa19.23■□□□□ 0.67
BRAT1-204ENST00000469750 IFT140Q96RY7 1462 aa19.23■□□□□ 0.67
BRAT1-204ENST00000469750 PES1O00541 588 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms