RNA–Protein interactions for RNA: ENST00000469655.5

KCNC4-206, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 3,487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-206ENST00000469655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.63■□□□□ 0.73
KCNC4-206ENST00000469655 CANXP27824 592 aaKnown RBP19.63■□□□□ 0.73
KCNC4-206ENST00000469655 KIF3BO15066 747 aa19.62■□□□□ 0.73
KCNC4-206ENST00000469655 FAM161AQ3B820 660 aa19.62■□□□□ 0.73
KCNC4-206ENST00000469655 CHD1O14646 1710 aa19.62■□□□□ 0.73
KCNC4-206ENST00000469655 KTN1Q86UP2 1357 aaKnown RBP19.62■□□□□ 0.73
KCNC4-206ENST00000469655 DISP3Q9P2K9 1392 aa19.61■□□□□ 0.73
KCNC4-206ENST00000469655 PLA2R1Q13018 1463 aa19.61■□□□□ 0.73
KCNC4-206ENST00000469655 CDC42BPBQ9Y5S2 1711 aa19.61■□□□□ 0.73
KCNC4-206ENST00000469655 PRAG1Q86YV5 1406 aa19.61■□□□□ 0.73
KCNC4-206ENST00000469655 TMF1P82094 1093 aa19.61■□□□□ 0.73
KCNC4-206ENST00000469655 WDR43Q15061 677 aaKnown RBP eCLIP19.61■□□□□ 0.73
KCNC4-206ENST00000469655 FAM13BQ9NYF5 915 aa19.61■□□□□ 0.73
KCNC4-206ENST00000469655 RRP7AQ9Y3A4 280 aaKnown RBP19.61■□□□□ 0.73
KCNC4-206ENST00000469655 TRAPPC8Q9Y2L5 1435 aa19.61■□□□□ 0.73
KCNC4-206ENST00000469655 NLRP13Q86W25 1043 aa19.6■□□□□ 0.73
KCNC4-206ENST00000469655 BCL2L13Q9BXK5 485 aa19.6■□□□□ 0.73
KCNC4-206ENST00000469655 ZHX1Q9UKY1 873 aaPredicted RBP19.6■□□□□ 0.73
KCNC4-206ENST00000469655 SAFB2Q14151 953 aaKnown RBP eCLIP19.6■□□□□ 0.73
KCNC4-206ENST00000469655 ARHGEF12Q9NZN5 1544 aa19.6■□□□□ 0.73
KCNC4-206ENST00000469655 MYH16Q9H6N6 1097 aa19.58■□□□□ 0.73
KCNC4-206ENST00000469655 PRDM10Q9NQV6 1147 aa19.58■□□□□ 0.73
KCNC4-206ENST00000469655 TESK2Q96S53 571 aa19.57■□□□□ 0.72
KCNC4-206ENST00000469655 A2MP01023 1474 aa19.57■□□□□ 0.72
KCNC4-206ENST00000469655 AMER1Q5JTC6 1135 aaPredicted RBP19.57■□□□□ 0.72
KCNC4-206ENST00000469655 ARHGEF5Q12774 1597 aa19.57■□□□□ 0.72
KCNC4-206ENST00000469655 ESPNB1AK53 854 aa19.57■□□□□ 0.72
KCNC4-206ENST00000469655 BCL11BQ9C0K0 894 aaPredicted RBP19.57■□□□□ 0.72
KCNC4-206ENST00000469655 ADAMTS8Q9UP79 889 aa19.57■□□□□ 0.72
KCNC4-206ENST00000469655 PDCL3Q9H2J4 239 aa19.56■□□□□ 0.72
KCNC4-206ENST00000469655 PREX2Q70Z35 1606 aa19.56■□□□□ 0.72
KCNC4-206ENST00000469655 PER1O15534 1290 aaPredicted RBP19.54■□□□□ 0.72
KCNC4-206ENST00000469655 BRD4O60885 1362 aaPredicted RBP19.54■□□□□ 0.72
KCNC4-206ENST00000469655 C8orf34Q49A92 452 aa19.54■□□□□ 0.72
KCNC4-206ENST00000469655 ABCC2Q92887 1545 aa19.53■□□□□ 0.72
KCNC4-206ENST00000469655 KIAA1211Q6ZU35 1233 aa19.53■□□□□ 0.72
KCNC4-206ENST00000469655 CLUAP1Q96AJ1 413 aa19.53■□□□□ 0.72
KCNC4-206ENST00000469655 KNSTRNQ9Y448 316 aa19.53■□□□□ 0.72
KCNC4-206ENST00000469655 KDM5DQ9BY66 1539 aa19.52■□□□□ 0.72
KCNC4-206ENST00000469655 PLCH2O75038 1416 aa19.52■□□□□ 0.72
KCNC4-206ENST00000469655 BECN1Q14457 450 aa19.52■□□□□ 0.71
KCNC4-206ENST00000469655 ERBB4Q15303 1308 aa19.5■□□□□ 0.71
KCNC4-206ENST00000469655 ERBINQ96RT1 1412 aa19.5■□□□□ 0.71
KCNC4-206ENST00000469655 AEBP2Q6ZN18 517 aaPredicted RBP19.49■□□□□ 0.71
KCNC4-206ENST00000469655 SCAPERQ9BY12 1400 aa19.49■□□□□ 0.71
KCNC4-206ENST00000469655 PRDM4Q9UKN5 801 aa19.49■□□□□ 0.71
KCNC4-206ENST00000469655 ZBTB7CA1YPR0 619 aa19.49■□□□□ 0.71
KCNC4-206ENST00000469655 CFAP70Q5T0N1 1121 aa19.48■□□□□ 0.71
KCNC4-206ENST00000469655 GGT6Q6P531 493 aa19.47■□□□□ 0.71
KCNC4-206ENST00000469655 APAF1O14727 1248 aa19.47■□□□□ 0.71
KCNC4-206ENST00000469655 CALD1Q05682 793 aaKnown RBP19.47■□□□□ 0.71
KCNC4-206ENST00000469655 BBXQ8WY36 941 aaPredicted RBP19.47■□□□□ 0.71
KCNC4-206ENST00000469655 POLR1AO95602 1720 aaPredicted RBP19.46■□□□□ 0.71
KCNC4-206ENST00000469655 BCAR3O75815 825 aa19.45■□□□□ 0.7
KCNC4-206ENST00000469655 LRPPRCP42704 1394 aaKnown RBP19.44■□□□□ 0.7
KCNC4-206ENST00000469655 PARD3Q8TEW0 1356 aa19.44■□□□□ 0.7
KCNC4-206ENST00000469655 DUOX2Q9NRD8 1548 aa19.44■□□□□ 0.7
KCNC4-206ENST00000469655 SEC24BO95487 1268 aa19.43■□□□□ 0.7
KCNC4-206ENST00000469655 TPM2P07951 284 aa19.43■□□□□ 0.7
KCNC4-206ENST00000469655 MYO5CQ9NQX4 1742 aa19.42■□□□□ 0.7
KCNC4-206ENST00000469655 NPM1P06748 294 aaKnown RBP eCLIP19.41■□□□□ 0.7
KCNC4-206ENST00000469655 TRAK2O60296 914 aa19.41■□□□□ 0.7
KCNC4-206ENST00000469655 CENPQQ7L2Z9 268 aaPredicted RBP19.41■□□□□ 0.7
KCNC4-206ENST00000469655 GRPEL1Q9HAV7 217 aa19.41■□□□□ 0.7
KCNC4-206ENST00000469655 KANK1Q14678 1352 aa19.4■□□□□ 0.7
KCNC4-206ENST00000469655 R3HCC1Q9Y3T6 440 aaKnown RBP19.4■□□□□ 0.7
KCNC4-206ENST00000469655 GPRASP1Q5JY77 1395 aa19.4■□□□□ 0.7
KCNC4-206ENST00000469655 MRE11P49959 708 aa19.39■□□□□ 0.7
KCNC4-206ENST00000469655 COG6Q9Y2V7 657 aa19.39■□□□□ 0.7
KCNC4-206ENST00000469655 COL17A1Q9UMD9 1497 aaPredicted RBP19.39■□□□□ 0.69
KCNC4-206ENST00000469655 ADGRF5Q8IZF2 1346 aa19.38■□□□□ 0.69
KCNC4-206ENST00000469655 ZCCHC11Q5TAX3 1644 aaKnown RBP19.38■□□□□ 0.69
KCNC4-206ENST00000469655 TRPM1Q7Z4N2 1603 aa19.38■□□□□ 0.69
KCNC4-206ENST00000469655 PPP2R1AP30153 589 aa19.38■□□□□ 0.69
KCNC4-206ENST00000469655 PANK1Q8TE04 598 aa19.38■□□□□ 0.69
KCNC4-206ENST00000469655 CHMP4BQ9H444 224 aaKnown RBP19.38■□□□□ 0.69
KCNC4-206ENST00000469655 TRAK1Q9UPV9 953 aa19.37■□□□□ 0.69
KCNC4-206ENST00000469655 FANCAO15360 1455 aa19.37■□□□□ 0.69
KCNC4-206ENST00000469655 SPINK5Q9NQ38 1064 aaPredicted RBP19.37■□□□□ 0.69
KCNC4-206ENST00000469655 PDIA4P13667 645 aaKnown RBP19.36■□□□□ 0.69
KCNC4-206ENST00000469655 MCM4P33991 863 aa19.36■□□□□ 0.69
KCNC4-206ENST00000469655 TMEM132EQ6IEE7 984 aa19.35■□□□□ 0.69
KCNC4-206ENST00000469655 SHROOM2Q13796 1616 aa19.35■□□□□ 0.69
KCNC4-206ENST00000469655 UNC13BO14795 1591 aa19.34■□□□□ 0.69
KCNC4-206ENST00000469655 CDCA8Q53HL2 280 aa19.34■□□□□ 0.69
KCNC4-206ENST00000469655 DMRT2Q9Y5R5 561 aa19.34■□□□□ 0.69
KCNC4-206ENST00000469655 MAST1Q9Y2H9 1570 aa19.33■□□□□ 0.69
KCNC4-206ENST00000469655 MSNP26038 577 aaKnown RBP19.33■□□□□ 0.69
KCNC4-206ENST00000469655 UPF2Q9HAU5 1272 aaKnown RBP19.33■□□□□ 0.69
KCNC4-206ENST00000469655 TNNQ9UQP3 1299 aa19.33■□□□□ 0.69
KCNC4-206ENST00000469655 ABCC1P33527 1531 aa19.33■□□□□ 0.68
KCNC4-206ENST00000469655 FSD2A1L4K1 749 aa19.32■□□□□ 0.68
KCNC4-206ENST00000469655 ADGRL1O94910 1474 aa19.32■□□□□ 0.68
KCNC4-206ENST00000469655 IQGAP3Q86VI3 1631 aa19.32■□□□□ 0.68
KCNC4-206ENST00000469655 MAPK8IP2Q13387 824 aaPredicted RBP19.31■□□□□ 0.68
KCNC4-206ENST00000469655 ATP10AO60312 1499 aa19.31■□□□□ 0.68
KCNC4-206ENST00000469655 MAGI2Q86UL8 1455 aa19.31■□□□□ 0.68
KCNC4-206ENST00000469655 PDE3BQ13370 1112 aa19.31■□□□□ 0.68
KCNC4-206ENST00000469655 STK26Q9P289 416 aa19.31■□□□□ 0.68
KCNC4-206ENST00000469655 UGGT1Q9NYU2 1555 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms