RNA–Protein interactions for RNA: ENST00000469307.4

PGAP2-215, Transcript of post-GPI attachment to proteins 2, human

TSL 3

Gene PGAP2, Length 798 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-215	ENST00000469307	HDGF	P51858	240 aa	Known RBP	18.8	■□□□□ 0.6
PGAP2-215	ENST00000469307	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	18.79	■□□□□ 0.6
PGAP2-215	ENST00000469307	XIRP1	Q702N8	1843 aa	Known RBP	18.79	■□□□□ 0.6
PGAP2-215	ENST00000469307	ITGAE	P38570	1179 aa		18.78	■□□□□ 0.6
PGAP2-215	ENST00000469307	MYO5B	Q9ULV0	1848 aa		18.78	■□□□□ 0.6
PGAP2-215	ENST00000469307	TBX22	Q9Y458	520 aa		18.76	■□□□□ 0.59
PGAP2-215	ENST00000469307	DIP2A	Q14689	1571 aa		18.75	■□□□□ 0.59
PGAP2-215	ENST00000469307	ADAMTS13	Q76LX8	1427 aa		18.74	■□□□□ 0.59
PGAP2-215	ENST00000469307	SPHKAP	Q2M3C7	1700 aa		18.74	■□□□□ 0.59
PGAP2-215	ENST00000469307	PIK3R4	Q99570	1358 aa		18.74	■□□□□ 0.59
PGAP2-215	ENST00000469307	SLC26A8	Q96RN1	970 aa		18.74	■□□□□ 0.59
PGAP2-215	ENST00000469307	NCOA3	Q9Y6Q9	1424 aa		18.74	■□□□□ 0.59
PGAP2-215	ENST00000469307	TMEM94	Q12767	1356 aa		18.73	■□□□□ 0.59
PGAP2-215	ENST00000469307	HSPA1L	P34931	641 aa		18.73	■□□□□ 0.59
PGAP2-215	ENST00000469307	TRPM2	O94759	1503 aa		18.73	■□□□□ 0.59
PGAP2-215	ENST00000469307	FAM135B	Q49AJ0	1406 aa		18.72	■□□□□ 0.59
PGAP2-215	ENST00000469307	CHD2	O14647	1828 aa	Known RBP	18.72	■□□□□ 0.59
PGAP2-215	ENST00000469307	DISP3	Q9P2K9	1392 aa		18.71	■□□□□ 0.59
PGAP2-215	ENST00000469307	PIP4K2B	P78356	416 aa		18.7	■□□□□ 0.58
PGAP2-215	ENST00000469307	SETBP1	Q9Y6X0	1596 aa		18.68	■□□□□ 0.58
PGAP2-215	ENST00000469307	PPP1R15A	O75807	674 aa	Predicted RBP	18.67	■□□□□ 0.58
PGAP2-215	ENST00000469307	PROSER2	Q86WR7	435 aa	Predicted RBP	18.66	■□□□□ 0.58
PGAP2-215	ENST00000469307	CLTCL1	P53675	1640 aa		18.65	■□□□□ 0.58
PGAP2-215	ENST00000469307	NRXN3	Q9Y4C0	1643 aa		18.64	■□□□□ 0.57
PGAP2-215	ENST00000469307	CHGA	P10645	457 aa	Known RBP	18.64	■□□□□ 0.57
PGAP2-215	ENST00000469307	SCAF1	Q9H7N4	1312 aa	Known RBP	18.64	■□□□□ 0.57
PGAP2-215	ENST00000469307	NEXMIF	Q5QGS0	1516 aa		18.63	■□□□□ 0.57
PGAP2-215	ENST00000469307	ILDR2	Q71H61	639 aa		18.62	■□□□□ 0.57
PGAP2-215	ENST00000469307	ACIN1	Q9UKV3	1341 aa	Known RBP	18.62	■□□□□ 0.57
PGAP2-215	ENST00000469307	MED1	Q15648	1581 aa	Predicted RBP	18.61	■□□□□ 0.57
PGAP2-215	ENST00000469307	MSH6	P52701	1360 aa		18.61	■□□□□ 0.57
PGAP2-215	ENST00000469307	PTPRU	Q92729	1446 aa		18.6	■□□□□ 0.57
PGAP2-215	ENST00000469307	BCAN	Q96GW7	911 aa		18.6	■□□□□ 0.57
PGAP2-215	ENST00000469307	XRN1	Q8IZH2	1706 aa	Known RBP	18.59	■□□□□ 0.57
PGAP2-215	ENST00000469307	PRAG1	Q86YV5	1406 aa		18.58	■□□□□ 0.57
PGAP2-215	ENST00000469307	RPGRIP1L	Q68CZ1	1315 aa		18.58	■□□□□ 0.57
PGAP2-215	ENST00000469307	SLC4A1AP	Q9BWU0	796 aa	Known RBP	18.57	■□□□□ 0.56
PGAP2-215	ENST00000469307	KIF1B	O60333	1816 aa		18.57	■□□□□ 0.56
PGAP2-215	ENST00000469307	DCC	P43146	1447 aa		18.57	■□□□□ 0.56
PGAP2-215	ENST00000469307	NUTM2D	Q5VT03	806 aa	Predicted RBP	18.56	■□□□□ 0.56
PGAP2-215	ENST00000469307	ROBO1	Q9Y6N7	1651 aa		18.55	■□□□□ 0.56
PGAP2-215	ENST00000469307	TRIM52	Q96A61	297 aa		18.55	■□□□□ 0.56
PGAP2-215	ENST00000469307	C19orf44	Q9H6X5	657 aa		18.55	■□□□□ 0.56
PGAP2-215	ENST00000469307	SLAIN2	Q9P270	581 aa		18.55	■□□□□ 0.56
PGAP2-215	ENST00000469307	AMOTL2	Q9Y2J4	779 aa		18.55	■□□□□ 0.56
PGAP2-215	ENST00000469307	MET	P08581	1390 aa		18.54	■□□□□ 0.56
PGAP2-215	ENST00000469307	SOCS7	O14512	581 aa		18.53	■□□□□ 0.56
PGAP2-215	ENST00000469307	ZNF326	Q5BKZ1	582 aa	Known RBP	18.53	■□□□□ 0.56
PGAP2-215	ENST00000469307	RBM33	Q96EV2	1170 aa	Known RBP	18.53	■□□□□ 0.56
PGAP2-215	ENST00000469307	VGF	O15240	615 aa	Predicted RBP	18.52	■□□□□ 0.56
PGAP2-215	ENST00000469307	CADPS2	Q86UW7	1296 aa		18.52	■□□□□ 0.56
PGAP2-215	ENST00000469307	SETD1A	O15047	1707 aa	Known RBP	18.51	■□□□□ 0.55
PGAP2-215	ENST00000469307	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	18.51	■□□□□ 0.55
PGAP2-215	ENST00000469307	SPATA31E1	Q6ZUB1	1445 aa		18.5	■□□□□ 0.55
PGAP2-215	ENST00000469307	PTCH1	Q13635	1447 aa		18.49	■□□□□ 0.55
PGAP2-215	ENST00000469307	MPHOSPH9	Q99550	1183 aa		18.49	■□□□□ 0.55
PGAP2-215	ENST00000469307	SETD5	Q9C0A6	1442 aa		18.49	■□□□□ 0.55
PGAP2-215	ENST00000469307	PPL	O60437	1756 aa		18.47	■□□□□ 0.55
PGAP2-215	ENST00000469307	SENP3	Q9H4L4	574 aa	Predicted RBP	18.47	■□□□□ 0.55
PGAP2-215	ENST00000469307	AHDC1	Q5TGY3	1603 aa	Predicted RBP	18.47	■□□□□ 0.55
PGAP2-215	ENST00000469307	CCDC144A	A2RUR9	1427 aa		18.47	■□□□□ 0.55
PGAP2-215	ENST00000469307	ADGRL3	Q9HAR2	1447 aa		18.46	■□□□□ 0.55
PGAP2-215	ENST00000469307	COL16A1	Q07092	1604 aa	Predicted RBP	18.45	■□□□□ 0.54
PGAP2-215	ENST00000469307	ATF3	P18847	181 aa		18.44	■□□□□ 0.54
PGAP2-215	ENST00000469307	ANKRD30B	Q9BXX2	1392 aa		18.43	■□□□□ 0.54
PGAP2-215	ENST00000469307	HRC	P23327	699 aa		18.43	■□□□□ 0.54
PGAP2-215	ENST00000469307	JCAD	Q9P266	1359 aa		18.42	■□□□□ 0.54
PGAP2-215	ENST00000469307	MST1R	Q04912	1400 aa		18.42	■□□□□ 0.54
PGAP2-215	ENST00000469307	PHLPP1	O60346	1717 aa		18.41	■□□□□ 0.54
PGAP2-215	ENST00000469307	IFT172	Q9UG01	1749 aa		18.41	■□□□□ 0.54
PGAP2-215	ENST00000469307	FOXD1	Q16676	465 aa		18.41	■□□□□ 0.54
PGAP2-215	ENST00000469307	TECPR2	O15040	1411 aa		18.4	■□□□□ 0.54
PGAP2-215	ENST00000469307	BRINP3	Q76B58	766 aa		18.4	■□□□□ 0.54
PGAP2-215	ENST00000469307	C14orf37	Q86TY3	774 aa		18.4	■□□□□ 0.54
PGAP2-215	ENST00000469307	RAB3GAP2	Q9H2M9	1393 aa		18.4	■□□□□ 0.54
PGAP2-215	ENST00000469307	ROBO2	Q9HCK4	1378 aa		18.4	■□□□□ 0.54
PGAP2-215	ENST00000469307	RGS17	Q9UGC6	210 aa	Predicted RBP	18.39	■□□□□ 0.53
PGAP2-215	ENST00000469307	NALCN	Q8IZF0	1738 aa		18.38	■□□□□ 0.53
PGAP2-215	ENST00000469307	PIK3C2G	O75747	1445 aa		18.38	■□□□□ 0.53
PGAP2-215	ENST00000469307	NRXN1	Q9ULB1	1477 aa		18.38	■□□□□ 0.53
PGAP2-215	ENST00000469307	ASXL1	Q8IXJ9	1541 aa		18.38	■□□□□ 0.53
PGAP2-215	ENST00000469307	ADGRF5	Q8IZF2	1346 aa		18.37	■□□□□ 0.53
PGAP2-215	ENST00000469307	LAMC1	P11047	1609 aa		18.36	■□□□□ 0.53
PGAP2-215	ENST00000469307	PHF23	Q9BUL5	403 aa	Predicted RBP	18.36	■□□□□ 0.53
PGAP2-215	ENST00000469307	NHSL1	Q5SYE7	1610 aa		18.35	■□□□□ 0.53
PGAP2-215	ENST00000469307	SPATA31A6	Q5VVP1	1343 aa		18.35	■□□□□ 0.53
PGAP2-215	ENST00000469307	SHPRH	Q149N8	1683 aa		18.34	■□□□□ 0.53
PGAP2-215	ENST00000469307	MYOM2	P54296	1465 aa		18.34	■□□□□ 0.53
PGAP2-215	ENST00000469307	ABCC11	Q96J66	1382 aa		18.34	■□□□□ 0.53
PGAP2-215	ENST00000469307	LRPPRC	P42704	1394 aa	Known RBP	18.33	■□□□□ 0.53
PGAP2-215	ENST00000469307	C1orf167	Q5SNV9	1468 aa		18.33	■□□□□ 0.52
PGAP2-215	ENST00000469307	SIRT1	Q96EB6	747 aa		18.31	■□□□□ 0.52
PGAP2-215	ENST00000469307	KNDC1	Q76NI1	1749 aa		18.31	■□□□□ 0.52
PGAP2-215	ENST00000469307	CDC42BPG	Q6DT37	1551 aa		18.3	■□□□□ 0.52
PGAP2-215	ENST00000469307	RGL3	Q3MIN7	710 aa		18.29	■□□□□ 0.52
PGAP2-215	ENST00000469307	C14orf93	Q9H972	538 aa	Known RBP	18.29	■□□□□ 0.52
PGAP2-215	ENST00000469307	LRP6	O75581	1613 aa		18.29	■□□□□ 0.52
PGAP2-215	ENST00000469307	STAC3	Q96MF2	364 aa		18.27	■□□□□ 0.52
PGAP2-215	ENST00000469307	YTHDC2	Q9H6S0	1430 aa	Known RBP	18.26	■□□□□ 0.51
PGAP2-215	ENST00000469307	SOS2	Q07890	1332 aa	Predicted RBP	18.25	■□□□□ 0.51

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