RNA–Protein interactions for RNA: ENST00000469028.1

SNU13-206, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-206ENST00000469028 KIF1BO60333 1816 aa16.29■□□□□ 0.2
SNU13-206ENST00000469028 TRIM26Q12899 539 aaPredicted RBP16.28■□□□□ 0.2
SNU13-206ENST00000469028 NUTM2DQ5VT03 806 aaPredicted RBP16.27■□□□□ 0.2
SNU13-206ENST00000469028 NEXMIFQ5QGS0 1516 aa16.27■□□□□ 0.2
SNU13-206ENST00000469028 CCDC144AA2RUR9 1427 aa16.27■□□□□ 0.19
SNU13-206ENST00000469028 PLEKHG1Q9ULL1 1385 aa16.26■□□□□ 0.19
SNU13-206ENST00000469028 CERKQ8TCT0 537 aa16.25■□□□□ 0.19
SNU13-206ENST00000469028 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
SNU13-206ENST00000469028 STRCP1A6NGW2 1772 aa16.25■□□□□ 0.19
SNU13-206ENST00000469028 PPP1R15AO75807 674 aaPredicted RBP16.24■□□□□ 0.19
SNU13-206ENST00000469028 ZNF326Q5BKZ1 582 aaKnown RBP16.24■□□□□ 0.19
SNU13-206ENST00000469028 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.24■□□□□ 0.19
SNU13-206ENST00000469028 SPATA31E1Q6ZUB1 1445 aa16.24■□□□□ 0.19
SNU13-206ENST00000469028 ANKRD30BQ9BXX2 1392 aa16.24■□□□□ 0.19
SNU13-206ENST00000469028 HDGFP51858 240 aaKnown RBP16.23■□□□□ 0.19
SNU13-206ENST00000469028 SLC26A8Q96RN1 970 aa16.23■□□□□ 0.19
SNU13-206ENST00000469028 ADAMTS13Q76LX8 1427 aa16.22■□□□□ 0.19
SNU13-206ENST00000469028 NRXN3Q9Y4C0 1643 aa16.22■□□□□ 0.19
SNU13-206ENST00000469028 CPS1P31327 1500 aa16.21■□□□□ 0.19
SNU13-206ENST00000469028 SETBP1Q9Y6X0 1596 aa16.2■□□□□ 0.18
SNU13-206ENST00000469028 PPLO60437 1756 aa16.2■□□□□ 0.18
SNU13-206ENST00000469028 BCANQ96GW7 911 aa16.19■□□□□ 0.18
SNU13-206ENST00000469028 DIP2AQ14689 1571 aa16.18■□□□□ 0.18
SNU13-206ENST00000469028 IFT172Q9UG01 1749 aa16.18■□□□□ 0.18
SNU13-206ENST00000469028 RPGRIP1LQ68CZ1 1315 aa16.18■□□□□ 0.18
SNU13-206ENST00000469028 NWD1Q149M9 1564 aa16.17■□□□□ 0.18
SNU13-206ENST00000469028 IQSEC2Q5JU85 1478 aa16.17■□□□□ 0.18
SNU13-206ENST00000469028 LRRC7Q96NW7 1537 aa16.16■□□□□ 0.18
SNU13-206ENST00000469028 RGL3Q3MIN7 710 aa16.16■□□□□ 0.18
SNU13-206ENST00000469028 TBX22Q9Y458 520 aa16.16■□□□□ 0.18
SNU13-206ENST00000469028 KCNA6P17658 529 aa16.14■□□□□ 0.17
SNU13-206ENST00000469028 CHD2O14647 1828 aaKnown RBP16.14■□□□□ 0.17
SNU13-206ENST00000469028 DHX57Q6P158 1386 aaKnown RBP16.13■□□□□ 0.17
SNU13-206ENST00000469028 VGFO15240 615 aaPredicted RBP16.13■□□□□ 0.17
SNU13-206ENST00000469028 SETD1AO15047 1707 aaKnown RBP16.13■□□□□ 0.17
SNU13-206ENST00000469028 ADGRF5Q8IZF2 1346 aa16.13■□□□□ 0.17
SNU13-206ENST00000469028 PTPRUQ92729 1446 aa16.12■□□□□ 0.17
SNU13-206ENST00000469028 ILDR1Q86SU0 546 aaPredicted RBP16.12■□□□□ 0.17
SNU13-206ENST00000469028 FBXO41Q8TF61 875 aa16.12■□□□□ 0.17
SNU13-206ENST00000469028 METP08581 1390 aa16.12■□□□□ 0.17
SNU13-206ENST00000469028 PIK3R4Q99570 1358 aa16.12■□□□□ 0.17
SNU13-206ENST00000469028 NKTRP30414 1462 aaKnown RBP16.11■□□□□ 0.17
SNU13-206ENST00000469028 XIRP1Q702N8 1843 aaKnown RBP16.11■□□□□ 0.17
SNU13-206ENST00000469028 ALKQ9UM73 1620 aa16.1■□□□□ 0.17
SNU13-206ENST00000469028 MYOM2P54296 1465 aa16.1■□□□□ 0.17
SNU13-206ENST00000469028 XRN1Q8IZH2 1706 aaKnown RBP16.09■□□□□ 0.17
SNU13-206ENST00000469028 PIK3C2GO75747 1445 aa16.09■□□□□ 0.17
SNU13-206ENST00000469028 NRXN1Q9ULB1 1477 aa16.09■□□□□ 0.17
SNU13-206ENST00000469028 TMEM94Q12767 1356 aa16.08■□□□□ 0.16
SNU13-206ENST00000469028 RBM33Q96EV2 1170 aaKnown RBP16.07■□□□□ 0.16
SNU13-206ENST00000469028 ASXL1Q8IXJ9 1541 aa16.06■□□□□ 0.16
SNU13-206ENST00000469028 PCGF6Q9BYE7 350 aa16.06■□□□□ 0.16
SNU13-206ENST00000469028 AMOTL2Q9Y2J4 779 aa16.06■□□□□ 0.16
SNU13-206ENST00000469028 PROSER2Q86WR7 435 aaPredicted RBP16.04■□□□□ 0.16
SNU13-206ENST00000469028 UBAP1LF5GYI3 381 aa16.03■□□□□ 0.16
SNU13-206ENST00000469028 SIN3AQ96ST3 1273 aa16.03■□□□□ 0.16
SNU13-206ENST00000469028 DCAF11Q8TEB1 546 aa16.02■□□□□ 0.16
SNU13-206ENST00000469028 PRAG1Q86YV5 1406 aa16.02■□□□□ 0.15
SNU13-206ENST00000469028 KDM2AQ9Y2K7 1162 aa16■□□□□ 0.15
SNU13-206ENST00000469028 LAMC1P11047 1609 aa16■□□□□ 0.15
SNU13-206ENST00000469028 CFAP70Q5T0N1 1121 aa15.99■□□□□ 0.15
SNU13-206ENST00000469028 C14orf93Q9H972 538 aaKnown RBP15.99■□□□□ 0.15
SNU13-206ENST00000469028 PTCH1Q13635 1447 aa15.99■□□□□ 0.15
SNU13-206ENST00000469028 NCOA3Q9Y6Q9 1424 aa15.99■□□□□ 0.15
SNU13-206ENST00000469028 TOM1O60784 492 aa15.98■□□□□ 0.15
SNU13-206ENST00000469028 TMEM132EQ6IEE7 984 aa15.98■□□□□ 0.15
SNU13-206ENST00000469028 ROBO2Q9HCK4 1378 aa15.98■□□□□ 0.15
SNU13-206ENST00000469028 LRPPRCP42704 1394 aaKnown RBP15.97■□□□□ 0.15
SNU13-206ENST00000469028 ADGRB1O14514 1584 aa15.96■□□□□ 0.15
SNU13-206ENST00000469028 TECPR2O15040 1411 aa15.96■□□□□ 0.15
SNU13-206ENST00000469028 NEUROD1Q13562 356 aa15.96■□□□□ 0.15
SNU13-206ENST00000469028 STAC3Q96MF2 364 aa15.96■□□□□ 0.15
SNU13-206ENST00000469028 MSH6P52701 1360 aa15.96■□□□□ 0.15
SNU13-206ENST00000469028 KNDC1Q76NI1 1749 aa15.96■□□□□ 0.15
SNU13-206ENST00000469028 YTHDC2Q9H6S0 1430 aaKnown RBP15.95■□□□□ 0.14
SNU13-206ENST00000469028 NALCNQ8IZF0 1738 aa15.95■□□□□ 0.14
SNU13-206ENST00000469028 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.95■□□□□ 0.14
SNU13-206ENST00000469028 PIP4K2BP78356 416 aa15.95■□□□□ 0.14
SNU13-206ENST00000469028 L3MBTL2Q969R5 705 aa15.94■□□□□ 0.14
SNU13-206ENST00000469028 STK26Q9P289 416 aa15.94■□□□□ 0.14
SNU13-206ENST00000469028 ABCC11Q96J66 1382 aa15.94■□□□□ 0.14
SNU13-206ENST00000469028 C14orf37Q86TY3 774 aa15.93■□□□□ 0.14
SNU13-206ENST00000469028 ADGRL3Q9HAR2 1447 aa15.93■□□□□ 0.14
SNU13-206ENST00000469028 SCAF1Q9H7N4 1312 aaKnown RBP15.92■□□□□ 0.14
SNU13-206ENST00000469028 PLEKHH1Q9ULM0 1364 aa15.91■□□□□ 0.14
SNU13-206ENST00000469028 C19orf44Q9H6X5 657 aa15.91■□□□□ 0.14
SNU13-206ENST00000469028 DCCP43146 1447 aa15.91■□□□□ 0.14
SNU13-206ENST00000469028 KIAA1210Q9ULL0 1709 aa15.9■□□□□ 0.14
SNU13-206ENST00000469028 DLC1Q96QB1 1528 aa15.89■□□□□ 0.13
SNU13-206ENST00000469028 WAPLQ7Z5K2 1190 aa15.89■□□□□ 0.13
SNU13-206ENST00000469028 FAM135BQ49AJ0 1406 aa15.88■□□□□ 0.13
SNU13-206ENST00000469028 ROBO1Q9Y6N7 1651 aa15.88■□□□□ 0.13
SNU13-206ENST00000469028 MST1RQ04912 1400 aa15.87■□□□□ 0.13
SNU13-206ENST00000469028 CADPS2Q86UW7 1296 aa15.87■□□□□ 0.13
SNU13-206ENST00000469028 SLAIN2Q9P270 581 aa15.87■□□□□ 0.13
SNU13-206ENST00000469028 ATF3P18847 181 aa15.86■□□□□ 0.13
SNU13-206ENST00000469028 HSPA1LP34931 641 aa15.86■□□□□ 0.13
SNU13-206ENST00000469028 NBPF1Q3BBV0 1214 aa15.86■□□□□ 0.13
SNU13-206ENST00000469028 SIRT1Q96EB6 747 aa15.86■□□□□ 0.13
SNU13-206ENST00000469028 TONSLQ96HA7 1378 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms