RNA–Protein interactions for RNA: ENST00000468704.1

TMEM50A-202, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 799 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-202ENST00000468704 TRPM2O94759 1503 aa25.95■■□□□ 1.74
TMEM50A-202ENST00000468704 CLTCL1P53675 1640 aa25.95■■□□□ 1.74
TMEM50A-202ENST00000468704 CHD2O14647 1828 aaKnown RBP25.93■■□□□ 1.74
TMEM50A-202ENST00000468704 PLEKHG1Q9ULL1 1385 aa25.92■■□□□ 1.74
TMEM50A-202ENST00000468704 DIP2AQ14689 1571 aa25.9■■□□□ 1.74
TMEM50A-202ENST00000468704 ALKQ9UM73 1620 aa25.9■■□□□ 1.74
TMEM50A-202ENST00000468704 CHGAP10645 457 aaKnown RBP25.9■■□□□ 1.74
TMEM50A-202ENST00000468704 NKTRP30414 1462 aaKnown RBP25.88■■□□□ 1.73
TMEM50A-202ENST00000468704 PPP1R15AO75807 674 aaPredicted RBP25.88■■□□□ 1.73
TMEM50A-202ENST00000468704 HDGFP51858 240 aaKnown RBP25.88■■□□□ 1.73
TMEM50A-202ENST00000468704 TOM1O60784 492 aa25.86■■□□□ 1.73
TMEM50A-202ENST00000468704 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.86■■□□□ 1.73
TMEM50A-202ENST00000468704 SLC26A8Q96RN1 970 aa25.85■■□□□ 1.73
TMEM50A-202ENST00000468704 TRIM52Q96A61 297 aa25.84■■□□□ 1.73
TMEM50A-202ENST00000468704 BCANQ96GW7 911 aa25.83■■□□□ 1.73
TMEM50A-202ENST00000468704 NRXN3Q9Y4C0 1643 aa25.81■■□□□ 1.72
TMEM50A-202ENST00000468704 SCAF1Q9H7N4 1312 aaKnown RBP25.81■■□□□ 1.72
TMEM50A-202ENST00000468704 KCNA6P17658 529 aa25.8■■□□□ 1.72
TMEM50A-202ENST00000468704 NEXMIFQ5QGS0 1516 aa25.79■■□□□ 1.72
TMEM50A-202ENST00000468704 SETBP1Q9Y6X0 1596 aa25.79■■□□□ 1.72
TMEM50A-202ENST00000468704 ADAMTS13Q76LX8 1427 aa25.78■■□□□ 1.72
TMEM50A-202ENST00000468704 PIP4K2BP78356 416 aa25.77■■□□□ 1.72
TMEM50A-202ENST00000468704 SLC4A1APQ9BWU0 796 aaKnown RBP25.77■■□□□ 1.72
TMEM50A-202ENST00000468704 SENP3Q9H4L4 574 aaPredicted RBP25.76■■□□□ 1.71
TMEM50A-202ENST00000468704 PPLO60437 1756 aa25.76■■□□□ 1.71
TMEM50A-202ENST00000468704 TMEM94Q12767 1356 aa25.75■■□□□ 1.71
TMEM50A-202ENST00000468704 NUTM2DQ5VT03 806 aaPredicted RBP25.74■■□□□ 1.71
TMEM50A-202ENST00000468704 TBX22Q9Y458 520 aa25.73■■□□□ 1.71
TMEM50A-202ENST00000468704 PIK3R4Q99570 1358 aa25.72■■□□□ 1.71
TMEM50A-202ENST00000468704 XRN1Q8IZH2 1706 aaKnown RBP25.72■■□□□ 1.71
TMEM50A-202ENST00000468704 ZNF326Q5BKZ1 582 aaKnown RBP25.72■■□□□ 1.71
TMEM50A-202ENST00000468704 PROSER2Q86WR7 435 aaPredicted RBP25.7■■□□□ 1.7
TMEM50A-202ENST00000468704 SETD5Q9C0A6 1442 aa25.69■■□□□ 1.7
TMEM50A-202ENST00000468704 ACIN1Q9UKV3 1341 aaKnown RBP25.68■■□□□ 1.7
TMEM50A-202ENST00000468704 SETD1AO15047 1707 aaKnown RBP25.68■■□□□ 1.7
TMEM50A-202ENST00000468704 IFT172Q9UG01 1749 aa25.67■■□□□ 1.7
TMEM50A-202ENST00000468704 HSPA1LP34931 641 aa25.66■■□□□ 1.7
TMEM50A-202ENST00000468704 ROBO1Q9Y6N7 1651 aa25.66■■□□□ 1.7
TMEM50A-202ENST00000468704 MSH6P52701 1360 aa25.65■■□□□ 1.7
TMEM50A-202ENST00000468704 CCDC144AA2RUR9 1427 aa25.63■■□□□ 1.69
TMEM50A-202ENST00000468704 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.63■■□□□ 1.69
TMEM50A-202ENST00000468704 NCOA3Q9Y6Q9 1424 aa25.63■■□□□ 1.69
TMEM50A-202ENST00000468704 DISP3Q9P2K9 1392 aa25.62■■□□□ 1.69
TMEM50A-202ENST00000468704 PTPRUQ92729 1446 aa25.61■■□□□ 1.69
TMEM50A-202ENST00000468704 FOXD1Q16676 465 aa25.6■■□□□ 1.69
TMEM50A-202ENST00000468704 RBM33Q96EV2 1170 aaKnown RBP25.6■■□□□ 1.69
TMEM50A-202ENST00000468704 MPHOSPH9Q99550 1183 aa25.6■■□□□ 1.69
TMEM50A-202ENST00000468704 RAB3GAP2Q9H2M9 1393 aa25.59■■□□□ 1.69
TMEM50A-202ENST00000468704 MED1Q15648 1581 aaPredicted RBP25.59■■□□□ 1.69
TMEM50A-202ENST00000468704 FAM135BQ49AJ0 1406 aa25.57■■□□□ 1.68
TMEM50A-202ENST00000468704 RPGRIP1LQ68CZ1 1315 aa25.57■■□□□ 1.68
TMEM50A-202ENST00000468704 NALCNQ8IZF0 1738 aa25.54■■□□□ 1.68
TMEM50A-202ENST00000468704 AMOTL2Q9Y2J4 779 aa25.54■■□□□ 1.68
TMEM50A-202ENST00000468704 METP08581 1390 aa25.54■■□□□ 1.68
TMEM50A-202ENST00000468704 SPATA31E1Q6ZUB1 1445 aa25.54■■□□□ 1.68
TMEM50A-202ENST00000468704 VGFO15240 615 aaPredicted RBP25.53■■□□□ 1.68
TMEM50A-202ENST00000468704 PHLPP1O60346 1717 aa25.53■■□□□ 1.68
TMEM50A-202ENST00000468704 C14orf37Q86TY3 774 aa25.52■■□□□ 1.68
TMEM50A-202ENST00000468704 DCCP43146 1447 aa25.49■■□□□ 1.67
TMEM50A-202ENST00000468704 PTCH1Q13635 1447 aa25.46■■□□□ 1.67
TMEM50A-202ENST00000468704 PRAG1Q86YV5 1406 aa25.46■■□□□ 1.67
TMEM50A-202ENST00000468704 ANKRD30BQ9BXX2 1392 aa25.45■■□□□ 1.67
TMEM50A-202ENST00000468704 KNDC1Q76NI1 1749 aa25.45■■□□□ 1.66
TMEM50A-202ENST00000468704 C19orf44Q9H6X5 657 aa25.44■■□□□ 1.66
TMEM50A-202ENST00000468704 SLAIN2Q9P270 581 aa25.44■■□□□ 1.66
TMEM50A-202ENST00000468704 ADGRL3Q9HAR2 1447 aa25.44■■□□□ 1.66
TMEM50A-202ENST00000468704 LAMC1P11047 1609 aa25.44■■□□□ 1.66
TMEM50A-202ENST00000468704 CADPS2Q86UW7 1296 aa25.43■■□□□ 1.66
TMEM50A-202ENST00000468704 COL16A1Q07092 1604 aaPredicted RBP25.43■■□□□ 1.66
TMEM50A-202ENST00000468704 ATF3P18847 181 aa25.42■■□□□ 1.66
TMEM50A-202ENST00000468704 AHDC1Q5TGY3 1603 aaPredicted RBP25.41■■□□□ 1.66
TMEM50A-202ENST00000468704 RGL3Q3MIN7 710 aa25.41■■□□□ 1.66
TMEM50A-202ENST00000468704 PIK3C2GO75747 1445 aa25.39■■□□□ 1.66
TMEM50A-202ENST00000468704 MYOM2P54296 1465 aa25.39■■□□□ 1.65
TMEM50A-202ENST00000468704 HRCP23327 699 aa25.38■■□□□ 1.65
TMEM50A-202ENST00000468704 ADGRF5Q8IZF2 1346 aa25.37■■□□□ 1.65
TMEM50A-202ENST00000468704 ASXL1Q8IXJ9 1541 aa25.37■■□□□ 1.65
TMEM50A-202ENST00000468704 NHSL1Q5SYE7 1610 aa25.37■■□□□ 1.65
TMEM50A-202ENST00000468704 MST1RQ04912 1400 aa25.35■■□□□ 1.65
TMEM50A-202ENST00000468704 NRXN1Q9ULB1 1477 aa25.34■■□□□ 1.65
TMEM50A-202ENST00000468704 ROBO2Q9HCK4 1378 aa25.34■■□□□ 1.65
TMEM50A-202ENST00000468704 SHPRHQ149N8 1683 aa25.34■■□□□ 1.65
TMEM50A-202ENST00000468704 ILDR2Q71H61 639 aa25.33■■□□□ 1.65
TMEM50A-202ENST00000468704 CDC42BPGQ6DT37 1551 aa25.31■■□□□ 1.64
TMEM50A-202ENST00000468704 TECPR2O15040 1411 aa25.31■■□□□ 1.64
TMEM50A-202ENST00000468704 PHF23Q9BUL5 403 aaPredicted RBP25.28■■□□□ 1.64
TMEM50A-202ENST00000468704 LRPPRCP42704 1394 aaKnown RBP25.27■■□□□ 1.64
TMEM50A-202ENST00000468704 JCADQ9P266 1359 aa25.27■■□□□ 1.64
TMEM50A-202ENST00000468704 BRINP3Q76B58 766 aa25.26■■□□□ 1.63
TMEM50A-202ENST00000468704 YTHDC2Q9H6S0 1430 aaKnown RBP25.23■■□□□ 1.63
TMEM50A-202ENST00000468704 C1orf167Q5SNV9 1468 aa25.22■■□□□ 1.63
TMEM50A-202ENST00000468704 ABCC11Q96J66 1382 aa25.22■■□□□ 1.63
TMEM50A-202ENST00000468704 FMN2Q9NZ56 1722 aa25.22■■□□□ 1.63
TMEM50A-202ENST00000468704 TMEM132EQ6IEE7 984 aa25.18■■□□□ 1.62
TMEM50A-202ENST00000468704 C14orf93Q9H972 538 aaKnown RBP25.18■■□□□ 1.62
TMEM50A-202ENST00000468704 STK26Q9P289 416 aa25.18■■□□□ 1.62
TMEM50A-202ENST00000468704 ADGRB1O14514 1584 aa25.17■■□□□ 1.62
TMEM50A-202ENST00000468704 DLC1Q96QB1 1528 aa25.16■■□□□ 1.62
TMEM50A-202ENST00000468704 DHX57Q6P158 1386 aaKnown RBP25.15■■□□□ 1.62
TMEM50A-202ENST00000468704 SPATA31A6Q5VVP1 1343 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms